Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04622 and BL02592
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:46
# Commandline: needle
# -asequence dna-align/BSNT_04622___yugJ.1.5803.seq
# -bsequence dna-align/BL02592___yugJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04622___yugJ-BL02592___yugJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04622___yugJ-BL02592___yugJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04622___yugJ
# 2: BL02592___yugJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1174
# Identity: 899/1174 (76.6%)
# Similarity: 899/1174 (76.6%)
# Gaps: 20/1174 ( 1.7%)
# Score: 3360.5
#
#
#=======================================
BSNT_04622___ 1 ATGCAAAACTTTACATACTGGAATCCGACCAAATTAATTTTCGGGCGCGG 50
|||.|.|||||||||||.||||||||.||.||..|.||.|||||.||.||
BL02592___yug 1 ATGGATAACTTTACATATTGGAATCCCACAAAGCTGATATTCGGCCGGGG 50
BSNT_04622___ 51 CGAAGTGGAAAGACTTCCGGAGGAACTCAAACCTTACGGAAAAAACGTAT 100
.|||||.||||..||..|.||.||..|.||||..|||||....||.||..
BL02592___yug 51 AGAAGTTGAAAAGCTGGCAGAAGAGGTGAAACAATACGGCCGCAATGTCC 100
BSNT_04622___ 101 TGCTTGTGTACGGAGGCGGCAGCATTAAACGCAGCGGCCTGTATGATCAA 150
||||.||.|||||.||.|||||||||||.||.|.|||..|.||.||||||
BL02592___yug 101 TGCTCGTATACGGCGGAGGCAGCATTAAGCGAAACGGTTTATACGATCAA 150
BSNT_04622___ 151 GTGATTGAACAGC--TGAATAAAGCCGGAGCGACCGTGCATGAATTAGCA 198
||.|||..| |.| |||| ||.||.||.||||||||.||||||.|..|.
BL02592___yug 151 GTCATTTCA-ATCCTTGAA-AAGGCGGGCGCGACCGTCCATGAACTGCCC 198
BSNT_04622___ 199 GGTGTGGAACCGAATCCTCGTGTGTCGACTGTTAATAAAGGTGTTGCCAT 248
||.||.|||||||||||.|||||..|.|||||.||||||||.|||||.||
BL02592___yug 199 GGCGTCGAACCGAATCCGCGTGTTGCCACTGTGAATAAAGGAGTTGCGAT 248
BSNT_04622___ 249 CTGTAAAGAACAAAACATTGA-TTTCTTGCTGGCTGTTGGAGGCGGAAGC 297
|||.|||||..|..|.||||| |||||| .||||.||.||.|||||||||
BL02592___yug 249 CTGCAAAGAGAACGATATTGACTTTCTT-TTGGCAGTCGGCGGCGGAAGC 297
BSNT_04622___ 298 GTAATCGACTGTACAAAAGCGATTGCCGCAGGAGCGAAGTATGATGGTGA 347
||.||.||.|||||.|||||.|||||.||.||||||||.||.||.||.||
BL02592___yug 298 GTCATTGATTGTACGAAAGCAATTGCTGCCGGAGCGAAATACGACGGCGA 347
BSNT_04622___ 348 TGCATGGGATATCGTTACGAAAAAGCAT----CAGCCAAAAGATGCTTTG 393
|||.||||||||.||.||||||||.||| |.|| .|||||..||
BL02592___yug 348 TGCGTGGGATATTGTGACGAAAAAACATATTCCGGC----TGATGCGCTG 393
BSNT_04622___ 394 CCATTCGGAACGGTATTGACTCTCGCTGCGACTGGTTCAGAAATGAACTC 443
||.||.|||||.||.||.||..|.||.||.||.||.||.|||||||||||
BL02592___yug 394 CCGTTTGGAACAGTTTTAACGTTAGCAGCAACAGGCTCTGAAATGAACTC 443
BSNT_04622___ 444 AGGATCTGTTATTACAAACTGGGAAACAAAAGAAAAATACGGCTGGGGCA 493
.||||||||.||.|||||.||||||||.||.|||||||||||||||||.|
BL02592___yug 444 GGGATCTGTGATCACAAATTGGGAAACCAATGAAAAATACGGCTGGGGAA 493
BSNT_04622___ 494 GCCCGCTTGTATTCCCTAAATTCTCGATTCTTGATCCGGTGAATACATTC 543
|||||||.||||||||||||||.||.||||||||||||||.||.||.||.
BL02592___yug 494 GCCCGCTCGTATTCCCTAAATTTTCAATTCTTGATCCGGTCAACACGTTT 543
BSNT_04622___ 544 ACCGTACCTAAAAACCACACGATCTACGGGATGGTTGACATGATGAGCCA 593
|||||.||.|||.||||||||||.|||||.||.||.|||||||||..|||
BL02592___yug 544 ACCGTCCCGAAAGACCACACGATTTACGGCATTGTCGACATGATGTCCCA 593
BSNT_04622___ 594 CGTATTCGAACAATACTTCCATCATGTATC--AAACACGCCGTATCAGGA 641
|||.||.||.|||||.||.||.|| ||.| |||.||.||.||||||||
BL02592___yug 594 CGTGTTTGAGCAATATTTTCACCA--TACCGAAAATACCCCTTATCAGGA 641
BSNT_04622___ 642 CCGCATGTGTGAATCACTTCTGCGTACAGTCATTGAAACAGCGCCTAAGC 691
|||.|||||.|||||.||.||....||.||.|||||||||||.|||||||
BL02592___yug 642 CCGGATGTGCGAATCCCTGCTTAAAACGGTAATTGAAACAGCTCCTAAGC 691
BSNT_04622___ 692 TGATTAATGATCTCGAAAATTACGAATTACGTGAGACGATCCTGTACACA 741
|.|||.|.||.||.|||||.||.||..|.|||||.|||||.|||||.|||
BL02592___yug 692 TCATTGAAGACCTAGAAAACTATGAGCTGCGTGAAACGATTCTGTATACA 741
BSNT_04622___ 742 GGAACAATCGCATTAAACGGCATGCTTTCTATGGGTGCAAGAGGGGATTG 791
||.||.||.||..|.|||||||||||.||.|||||.|||.|.||.||.||
BL02592___yug 742 GGCACCATTGCGCTGAACGGCATGCTATCAATGGGCGCACGCGGAGACTG 791
BSNT_04622___ 792 GGCTACTCATAATATTGAACATGCAGTATCAGCCGTTTATGATATTCCGC 841
|||.||.||.|||||.||.||.||.||.||||||||.||.||||||||||
BL02592___yug 792 GGCAACGCACAATATCGAGCACGCTGTTTCAGCCGTATACGATATTCCGC 841
BSNT_04622___ 842 ATGCCGGCGGACTGGCGATTCTGTTCCCGAATTGGATGAGACACACATTG 891
||||.||.||.||.|||||||||||||||||||||||||..|||||..|.
BL02592___yug 842 ATGCGGGAGGGCTTGCGATTCTGTTCCCGAATTGGATGAAGCACACGCTT 891
BSNT_04622___ 892 TCTGAAAACCCTGCCCGCATGAAACAGCTTGCAGTTCGCGTGTTTGATGT 941
||.||.|||...|.||||.|.|||||||||||.||.||.||.|||||.||
BL02592___yug 892 TCCGAGAACGTCGGCCGCTTTAAACAGCTTGCCGTCCGTGTTTTTGACGT 941
BSNT_04622___ 942 TGAAGAAGCAGGTAAAACAGATGAAGAAATCGCACTTGAAGGTATCGATA 991
.||.|||.||||.|||||.|||...|||.|.||.||||..||.|||||.|
BL02592___yug 942 AGATGAAACAGGAAAAACCGATCGCGAAGTGGCGCTTGTTGGAATCGAGA 991
BSNT_04622___ 992 AGCTGTCCGCATTCTGGACAAGCCTTGGCGCTCCGAACCGTCTTGCTGAT 1041
|.|||||.|.|||||||||.|||||||||||.||.||.||||||||.|||
BL02592___yug 992 AACTGTCTGAATTCTGGACCAGCCTTGGCGCGCCAAATCGTCTTGCCGAT 1041
BSNT_04622___ 1042 TATGATATTAATGATGAGCAGCTTGA-CACAATCGCTGACAAGGCAATGG 1090
|||||.||||..||||||.||||||| |.| ||.||.|||||.||.||||
BL02592___yug 1042 TATGACATTACAGATGAGAAGCTTGATCTC-ATTGCCGACAAAGCGATGG 1090
BSNT_04622___ 1091 CTAACGGTACATTCGGCCAATTTAAATCACTCAACAAAGAAGATGTGCTG 1140
|.|||||...||||||||..||||||.|.||.||.|||||.|||||.|||
BL02592___yug 1091 CAAACGGCGAATTCGGCCGCTTTAAAACGCTGAATAAAGACGATGTTCTG 1140
BSNT_04622___ 1141 TCAATTTTGAAAGCATCTCTATAA 1164
||.||||||||.||.|||.|||||
BL02592___yug 1141 TCTATTTTGAAGGCTTCTTTATAA 1164
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