Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04616 and BL02589

See Amino acid alignment / Visit BSNT_04616 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:45
# Commandline: needle
#    -asequence dna-align/BSNT_04616___yugN.1.5803.seq
#    -bsequence dna-align/BL02589___yugN.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04616___yugN-BL02589___yugN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04616___yugN-BL02589___yugN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04616___yugN
# 2: BL02589___yugN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 428
# Identity:     274/428 (64.0%)
# Similarity:   274/428 (64.0%)
# Gaps:          46/428 (10.7%)
# Score: 727.5
# 
#
#=======================================

BSNT_04616___      1 ATGATACCAATACCTTCCGCGATAGATGG----GCAGTC-TTTTCTGCTT     45
                     ||||||....|||||||.|    |..|||    .|.||| |||||| |||
BL02589___yug      1 ATGATAAGCTTACCTTCTG----AACTGGAAAACCGGTCGTTTTCT-CTT     45

BSNT_04616___     46 CAAGAACTGGAACAAGTGATGAAGCCGCTCGGTTATGTGATAAACGGCGG     95
                     .|..|.||.|||||...|.|||||||.|||||.||||||||.|.||||||
BL02589___yug     46 TATCACCTCGAACAGACGCTGAAGCCTCTCGGCTATGTGATCAGCGGCGG     95

BSNT_04616___     96 CTGGGAATACGATCATGGCTACTTTGATTATAAAATTGATGATAGA-GAC    144
                     |||||||||.||.|..||||..|||||.|||||.||||||||| || |||
BL02589___yug     96 CTGGGAATATGACCGCGGCTTTTTTGACTATAAGATTGATGAT-GAGGAC    144

BSNT_04616___    145 GGCTATTTATTTTTAAGAATTCCCGTCAATGCG--GTACAGGGCAGTCTC    192
                     ||.||..|.|||||..|.|||||..|..|.|||  |.|| ||.||| ||.
BL02589___yug    145 GGATACCTGTTTTTGCGGATTCCGTTTGAGGCGGAGGAC-GGACAG-CTT    192

BSNT_04616___    193 GATGAACGAGGGGCGGCCGTCCGGATCGGAACGCCATTTATGCTGAGACA    242
                     |||...|.|...|||.|.|||..|.||||.|||||.|||.||||..|.||
BL02589___yug    193 GATTCGCAAAATGCGACGGTCAAGCTCGGCACGCCGTTTTTGCTTCGCCA    242

BSNT_04616___    243 GGTGTTTCAGGCGGATGTTGACGATCACGCCG---AGGGAGGGCCTTTCC    289
                     .||.|.|||||..|...|.||.||..|||.||   ||   |||..|||||
BL02589___yug    243 TGTCTATCAGGAAGCGCTGGATGACTACGTCGTTCAG---GGGAATTTCC    289

BSNT_04616___    290 AATCA-CTGTTTAATCAATTTTCCGAACCG---GAAAGGCGGGACGCGGA    335
                     ...|| || |||.|.||.|||.||||||||   ||||   ..|||||.||
BL02589___yug    290 GCGCATCT-TTTGACCAGTTTGCCGAACCGAAAGAAA---AAGACGCCGA    335

BSNT_04616___    336 AATTGATCCGGCATTTTTGGATATCGGCGCCTCTC---TCGTGAAAGAAT    382
                     .|||  .|||||.|.|.||.|.|.|...|||..||   | ||.||||||.
BL02589___yug    336 TATT--CCCGGCGTCTATGAAAAGCTTGGCCAATCGTAT-GTAAAAGAAC    382

BSNT_04616___    383 TGGAGGATG---TTC--TGTTACACTAG    405
                     |.||.||.|   |||  |.|||.     
BL02589___yug    383 TCGAAGAGGCGCTTCTTTCTTAA-----    405


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