Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04610 and BL02588
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:45
# Commandline: needle
# -asequence dna-align/BSNT_04610___yugP.1.5803.seq
# -bsequence dna-align/BL02588___yugP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04610___yugP-BL02588___yugP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04610___yugP-BL02588___yugP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04610___yugP
# 2: BL02588___yugP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 688
# Identity: 521/688 (75.7%)
# Similarity: 521/688 (75.7%)
# Gaps: 17/688 ( 2.5%)
# Score: 1952.0
#
#
#=======================================
BSNT_04610___ 1 ------ATGCTGTTTATA-TTTTTAACAATAGCCGCATTGGGATTGTCGT 43
|||.| |||.|| ||.||||||.|.||.|||||.||.||.|||.
BL02588___yug 1 ATGAGCATGAT-TTTTTACTTGTTAACATTTGCTGCATTAGGTTTATCGA 49
BSNT_04610___ 44 TTTGGGCACAATTTAAAGTAAAGAGCAACTTTGAAAAATATTCAAAAGTG 93
|||||||||||||||||||||||||||||||||||||||||||||||||.
BL02588___yug 50 TTTGGGCACAATTTAAAGTAAAGAGCAACTTTGAAAAATATTCAAAAGTA 99
BSNT_04610___ 94 GAAGCCTCAAGCGGACGTACAGGGGCAGAAACGGCAAGACGGATTTTAGA 143
||.||.||||||||..|.||.||.||.|||..|||.||||.||||.|.||
BL02588___yug 100 GAGGCGTCAAGCGGGAGAACTGGAGCCGAAGTGGCCAGACAGATTCTCGA 149
BSNT_04610___ 144 TATAAACGGTCTTTACGACGTGCCGGTCGAACCGGTAAGAGGCACTTTAA 193
...||||||.||||||||.||.|||||.||||||||||||||.||.||.|
BL02588___yug 150 CCGAAACGGCCTTTACGATGTCCCGGTTGAACCGGTAAGAGGAACCTTGA 199
BSNT_04610___ 194 CAGACCATTACGACCCGACAAGACGGGTGGTGCGTTTATCTGAGCCGGTC 243
||||||||||.|||||||||..|||.||.|||||..|.||.||.||.||.
BL02588___yug 200 CAGACCATTATGACCCGACAGCACGCGTTGTGCGCCTGTCCGAACCCGTA 249
BSNT_04610___ 244 TATTACGGCCGCTCAATTTCCGCCATATCCGTAGCTTCCCATGAAGTCGG 293
||.||||||||.|||||..|.||..|.|||||.||||||||||||..|||
BL02588___yug 250 TACTACGGCCGTTCAATCGCAGCGGTTTCCGTTGCTTCCCATGAATGCGG 299
BSNT_04610___ 294 ACATGCCTTGCAGCATCAGGAGTCATATGGTGCGCTTGTGCTGAGACATA 343
|||||||.|||||||.|||||||||||.||.||.|||||..||||.||||
BL02588___yug 300 ACATGCCCTGCAGCACCAGGAGTCATACGGCGCACTTGTTTTGAGGCATA 349
BSNT_04610___ 344 AAATCTTCCCAGTCGTGAATTTTGCATCCGGTGTAGCTCC---TTTGCTT 390
|.||.||.||.||||||||.|||.|.||.||.||.||.|| ||||.||
BL02588___yug 350 AGATGTTTCCGGTCGTGAACTTTTCTTCGGGAGTGGCGCCGTTTTTGTTT 399
BSNT_04610___ 391 TTCTTAGGAGGCATGCTTCTCGGCAGCCTGAATTTGATCGGGCTTGGCAT 440
.|| ||.||.|||||.|||||.|||||||||.|||||||.||.|||||
BL02588___yug 400 ATC---GGCGGAATGCTGCTCGGAAGCCTGAATCTGATCGGACTCGGCAT 446
BSNT_04610___ 441 CATACTGTTTTCAGCGGCAGTCTTTTTCCAGCTGATTACATTGCCTGTCG 490
||||.|||||||.|||||.||.||.||||||||..|.|||||||||||.|
BL02588___yug 447 CATATTGTTTTCTGCGGCCGTATTCTTCCAGCTTGTGACATTGCCTGTTG 496
BSNT_04610___ 491 AATTCAATGCAAGTTCACGTGCGAAGCAGATTATTGTGTCAGAAGGATTC 540
||||.||.|||||.||.||.||.||...|||.||.||.|||||||||.|.
BL02588___yug 497 AATTTAACGCAAGCTCCCGGGCAAAAAGGATCATCGTTTCAGAAGGAATG 546
BSNT_04610___ 541 ATCCGAAACAATGAAGAAAATGGGGTAAATAAAGTGCTGAGTGCTGCTGC 590
|||||.||||..||.||||..||.||.|..||.||||||..|||.||.||
BL02588___yug 547 ATCCGCAACACGGAGGAAAGAGGCGTCAGCAAGGTGCTGGATGCCGCGGC 596
BSNT_04610___ 591 CTTAACGTATGTGGCCGCCGCCCTGGTTTCCCTGTTTGAACTACTTCGTT 640
..|.||.||.||.||.||.||.||.|||||.||||||||.||.||.||.|
BL02588___yug 597 TCTGACATACGTCGCAGCAGCGCTTGTTTCGCTGTTTGAGCTGCTGCGCT 646
BSNT_04610___ 641 TTGTGATGATTTTCTTAAACGGTCGTGATGAGAATTAA 678
|.||....||||||.|...|||||||.||| |.|||
BL02588___yug 647 TCGTCGCAATTTTCCTGTCCGGTCGTAATG---ACTAA 681
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