Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04610 and BL02588

See Amino acid alignment / Visit BSNT_04610 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:45
# Commandline: needle
#    -asequence dna-align/BSNT_04610___yugP.1.5803.seq
#    -bsequence dna-align/BL02588___yugP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04610___yugP-BL02588___yugP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04610___yugP-BL02588___yugP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04610___yugP
# 2: BL02588___yugP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 688
# Identity:     521/688 (75.7%)
# Similarity:   521/688 (75.7%)
# Gaps:          17/688 ( 2.5%)
# Score: 1952.0
# 
#
#=======================================

BSNT_04610___      1 ------ATGCTGTTTATA-TTTTTAACAATAGCCGCATTGGGATTGTCGT     43
                           |||.| |||.|| ||.||||||.|.||.|||||.||.||.|||.
BL02588___yug      1 ATGAGCATGAT-TTTTTACTTGTTAACATTTGCTGCATTAGGTTTATCGA     49

BSNT_04610___     44 TTTGGGCACAATTTAAAGTAAAGAGCAACTTTGAAAAATATTCAAAAGTG     93
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BL02588___yug     50 TTTGGGCACAATTTAAAGTAAAGAGCAACTTTGAAAAATATTCAAAAGTA     99

BSNT_04610___     94 GAAGCCTCAAGCGGACGTACAGGGGCAGAAACGGCAAGACGGATTTTAGA    143
                     ||.||.||||||||..|.||.||.||.|||..|||.||||.||||.|.||
BL02588___yug    100 GAGGCGTCAAGCGGGAGAACTGGAGCCGAAGTGGCCAGACAGATTCTCGA    149

BSNT_04610___    144 TATAAACGGTCTTTACGACGTGCCGGTCGAACCGGTAAGAGGCACTTTAA    193
                     ...||||||.||||||||.||.|||||.||||||||||||||.||.||.|
BL02588___yug    150 CCGAAACGGCCTTTACGATGTCCCGGTTGAACCGGTAAGAGGAACCTTGA    199

BSNT_04610___    194 CAGACCATTACGACCCGACAAGACGGGTGGTGCGTTTATCTGAGCCGGTC    243
                     ||||||||||.|||||||||..|||.||.|||||..|.||.||.||.||.
BL02588___yug    200 CAGACCATTATGACCCGACAGCACGCGTTGTGCGCCTGTCCGAACCCGTA    249

BSNT_04610___    244 TATTACGGCCGCTCAATTTCCGCCATATCCGTAGCTTCCCATGAAGTCGG    293
                     ||.||||||||.|||||..|.||..|.|||||.||||||||||||..|||
BL02588___yug    250 TACTACGGCCGTTCAATCGCAGCGGTTTCCGTTGCTTCCCATGAATGCGG    299

BSNT_04610___    294 ACATGCCTTGCAGCATCAGGAGTCATATGGTGCGCTTGTGCTGAGACATA    343
                     |||||||.|||||||.|||||||||||.||.||.|||||..||||.||||
BL02588___yug    300 ACATGCCCTGCAGCACCAGGAGTCATACGGCGCACTTGTTTTGAGGCATA    349

BSNT_04610___    344 AAATCTTCCCAGTCGTGAATTTTGCATCCGGTGTAGCTCC---TTTGCTT    390
                     |.||.||.||.||||||||.|||.|.||.||.||.||.||   ||||.||
BL02588___yug    350 AGATGTTTCCGGTCGTGAACTTTTCTTCGGGAGTGGCGCCGTTTTTGTTT    399

BSNT_04610___    391 TTCTTAGGAGGCATGCTTCTCGGCAGCCTGAATTTGATCGGGCTTGGCAT    440
                     .||   ||.||.|||||.|||||.|||||||||.|||||||.||.|||||
BL02588___yug    400 ATC---GGCGGAATGCTGCTCGGAAGCCTGAATCTGATCGGACTCGGCAT    446

BSNT_04610___    441 CATACTGTTTTCAGCGGCAGTCTTTTTCCAGCTGATTACATTGCCTGTCG    490
                     ||||.|||||||.|||||.||.||.||||||||..|.|||||||||||.|
BL02588___yug    447 CATATTGTTTTCTGCGGCCGTATTCTTCCAGCTTGTGACATTGCCTGTTG    496

BSNT_04610___    491 AATTCAATGCAAGTTCACGTGCGAAGCAGATTATTGTGTCAGAAGGATTC    540
                     ||||.||.|||||.||.||.||.||...|||.||.||.|||||||||.|.
BL02588___yug    497 AATTTAACGCAAGCTCCCGGGCAAAAAGGATCATCGTTTCAGAAGGAATG    546

BSNT_04610___    541 ATCCGAAACAATGAAGAAAATGGGGTAAATAAAGTGCTGAGTGCTGCTGC    590
                     |||||.||||..||.||||..||.||.|..||.||||||..|||.||.||
BL02588___yug    547 ATCCGCAACACGGAGGAAAGAGGCGTCAGCAAGGTGCTGGATGCCGCGGC    596

BSNT_04610___    591 CTTAACGTATGTGGCCGCCGCCCTGGTTTCCCTGTTTGAACTACTTCGTT    640
                     ..|.||.||.||.||.||.||.||.|||||.||||||||.||.||.||.|
BL02588___yug    597 TCTGACATACGTCGCAGCAGCGCTTGTTTCGCTGTTTGAGCTGCTGCGCT    646

BSNT_04610___    641 TTGTGATGATTTTCTTAAACGGTCGTGATGAGAATTAA    678
                     |.||....||||||.|...|||||||.|||   |.|||
BL02588___yug    647 TCGTCGCAATTTTCCTGTCCGGTCGTAATG---ACTAA    681


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