Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04599 and BL02582
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:45
# Commandline: needle
# -asequence dna-align/BSNT_04599___mcpB.1.5803.seq
# -bsequence dna-align/BL02582.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04599___mcpB-BL02582.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04599___mcpB-BL02582.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04599___mcpB
# 2: BL02582
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2150
# Identity: 1374/2150 (63.9%)
# Similarity: 1374/2150 (63.9%)
# Gaps: 328/2150 (15.3%)
# Score: 4051.5
#
#
#=======================================
BSNT_04599___ 1 ATGAAGA--CTTTTATCAATTGGCTTAAGAAA---CCGTCTATTTCAAAG 45
|||||.| |||||| |||||| |.|||| ||.||||||||.||.
BL02582 1 ATGAAAAAGCTTTTA--AATTGG---ACGAAACGTCCTTCTATTTCTAAA 45
BSNT_04599___ 46 AAATTAATCGTCTCATTTATTGCGATTCTCATTATCCCTATTCTTATATT 95
||||||||..|||||||||| || |||||.|..|.||||..||.||
BL02582 46 AAATTAATTTTCTCATTTAT----AT--TCATTTTAACAATTCCGATCTT 89
BSNT_04599___ 96 AG-----------AATTTAGCTCTTACCGAAGCGCCAGCGGAAAGCTGGA 134
.| |.||.|..|.|||| .||||||.|.|.|||.||
BL02582 90 GGTTCTTTCGGTTACTTCATATTTTAC-----GGCCAGCAGCACGCTCGA 134
BSNT_04599___ 135 TCAGGAAATTATGGGAAATGCGAAAAACAGTGTCGAT----------ACA 174
..|.||.|||.||.|||.|||||||.|||.|.||||| |||
BL02582 135 GGATGAGATTTTGAGAAGTGCGAAAGACAATATCGATGAACTGAACGACA 184
BSNT_04599___ 175 TTTAATACAACTGTTACAAATGATCTGGGAGAAAAAGCGAAAGCAG---T 221
|| ||.||.| |.|||.|.|| .||| |||.|| |
BL02582 185 TT--ATTCAGC--------AAGATATCGG-----CAGC--AAGGAGACTT 217
BSNT_04599___ 222 CACCTT-----TTTCAGTGAATCTCTT-----AAAAGGTCCGCATTCAAA 261
| |.|| ||||||.||||...|| |||| ||.|.||||
BL02582 218 C-CATTGCGTATTTCAGCGAATGGATTGATCAAAAA-----GCGTACAAA 261
BSNT_04599___ 262 GGGAAA--------TCCAATCAAGAAGAGATCAA-------AGCTAAATT 296
|.|||| |.||||.| |.||| ||| |.||
BL02582 262 GAGAAAGGCCAGACTGCAATTA-------AACAACGGTTTGAGC--AGTT 302
BSNT_04599___ 297 TTCACAATATGTATCTATTAATCAAGGAGTAGCCAGAA------TTTATG 340
|.||.||.| .||||..|..|| .||| ||.|..
BL02582 303 TGCAAAACA---------GAATCCCGACGT----CGAACTCGTCTTCACC 339
BSNT_04599___ 341 GGGGC-GCAGATAACGGCACTTACGTACAAGCGCCAAAAGAAAAATTGCC 389
||..| |.||||| |...|||||.||||...||.||.|....|.||||
BL02582 340 GGATCGGAAGATA---GTGTTTACGCACAATATCCGAATGCTCCACTGCC 386
BSNT_04599___ 390 GGACGGATACGACCCGAGACAACGCCCTTGGTAC---CAGGATG----CG 432
.|||||.||.||||||..|.|||||...|||||| ||||.|| .|
BL02582 387 CGACGGGTATGACCCGGTAGAACGCGACTGGTACAAACAGGCTGTCCAGG 436
BSNT_04599___ 433 ATGAAGGCCGGCGGTGAAATTG-TCGTGACAGATCCTTACGTGGCTGCGA 481
|..|||| ||||..| |.||.||.||.|||||.|.|.|||| |
BL02582 437 AAAAAGG--------GAAAACGATTGTAACTGAACCTTATGAGTCTGC-A 477
BSNT_04599___ 482 GTGACGGAAGC--ATGGTCATTACCATTGCACAGGAGCTGAAGGACGGAT 529
...|||| .|| ||||||.|.||.||.||..||.||...||.|||||.|
BL02582 478 TCAACGG-GGCATATGGTCGTCACGATCGCCAAGCAGAATAAAGACGGTT 526
BSNT_04599___ 530 CTGGCGTTGTCGCCATGGATATTACCATTGATAAATTGTTAGAACAAAT- 578
|||||||.||||||.|.||..|.|.||||||.||..| ||.|||||
BL02582 527 CTGGCGTAGTCGCCCTTGACTTGAACATTGACAAGCT----GATCAAATC 572
BSNT_04599___ 579 --GAAACA-AATCAAGGTCGGAAAAGAAGGTTATGCTTTCATTGCAACAA 625
.||||| .||||...||||||||...||.|||||.|||||
BL02582 573 GGCAAACAGCATCAGCATCGGAAAAACCGGATATGCATTCAT-------- 614
BSNT_04599___ 626 AAAAC---------AAAACCTATGTCGCCCACAAGAACCATAAGGCTGG- 665
.|.| |||||.|||||||||||...|||...|||.||.||
BL02582 615 -CATCGGCGAGGGGAAAACGTATGTCGCCCATCCGAAAATTAAAGCCGGC 663
BSNT_04599___ 666 --AGAA----AAGCT-TTCAGGCGACTGGGTAGCCAAAATGTAT--GCGA 706
|||| ||||| .|| .|||.| ||| |||||| | || |
BL02582 664 ACAGAAGCAGAAGCTGATC---TGACAG---AGC--AAATGT-TCAGC-A 703
BSNT_04599___ 707 ATGACAGCGGTGAACTCCAGTATACTCTTAATAA------CGAAGATAAA 750
|.||.||||| |..||..||..|||||.| |.||||.||.
BL02582 704 AAGAGAGCGG------CTTGTTCACCTTTAATGAAAAAGGCAAAGAAAAG 747
BSNT_04599___ 751 AAGATGACCTATACTACAAACGAACTGACTGGTTGGAAAATAGCCGGCAC 800
||.|.|..||..||.||||||.||||.||.|||||||||||.|.|||.|.
BL02582 748 AAAACGGTCTTCACGACAAACAAACTAACCGGTTGGAAAATCGGCGGAAA 797
BSNT_04599___ 801 AATGTATATGGATGAAATTAAGGATGCCTCAAAGTCTGTGCTGACT-ACA 849
.|||.|||..|..||.|||||.||.||..|..||.|.||||| | |||
BL02582 798 GATGAATACAGCAGAGATTAAAGACGCTGCCCAGCCCGTGCT---TCACA 844
BSNT_04599___ 850 -GGAATGATTGTGCTGATTGCTTCCATTGTGGCAGGCGGAATTTTAATTC 898
||.| ||..||| ||| |||||||||..||| ||||
BL02582 845 TGGCA-----GTCATGA-------CAT--TGGCAGGCGCGATT---ATTC 877
BSNT_04599___ 899 TG------------------TTTATCGTTCGTTCAATTACAAAACCGTTA 930
|| ||||||||.||..|.||.|..||.||.|||
BL02582 878 TGGGCGGAATCCTTGTTTACTTTATCGTCCGCGCGATCAGCAAGCCTTTA 927
BSNT_04599___ 931 AAACGTCTTGT-TCAATCATCGAAAACGATCAGCAGGGGGGATCTGACCG 979
||.|..||.|| || .||..|.||||..||||||...||.||||||||..
BL02582 928 AATCAACTCGTCTC-TTCTGCAAAAAGCATCAGCGAAGGAGATCTGACAC 976
BSNT_04599___ 980 AAACGATCGAAATCCATTCAAAGGATGAGCTTGGGGAGCTTGGGGA-AAG 1028
|||..|||||..|||..||.||.||.||..|.||..||| ||||.| |||
BL02582 977 AAAAAATCGATGTCCGCTCCAAAGACGAATTCGGCCAGC-TGGGCACAAG 1025
BSNT_04599___ 1029 CTTCAATGAAATGG--GACAATCTCTCCGCTCGCTGATCAGCGCTATTCA 1076
||||||.||||||| ||| ||..|.|||||||||||||||.|.|||||
BL02582 1026 CTTCAACGAAATGGCTGAC--TCGTTGCGCTCGCTGATCAGCACGATTCA 1073
BSNT_04599___ 1077 GGACTCGGTGAACAATGTGGCCGCATCTTCCGAACAGCTTACCGCATCTG 1126
.||.|||||..||||||||||..|.|||||.||.|||||.||.|||...|
BL02582 1074 AGAATCGGTCGACAATGTGGCATCTTCTTCAGAGCAGCTGACGGCAAGCG 1123
BSNT_04599___ 1127 CCGGGCAGACGAGTAAAGCCACCGAGCATATTACGATGGCGATTGAGCAG 1176
|.|..|||||.||.|||||.||||||||.|||||..|.||.||.||||.|
BL02582 1124 CGGACCAGACAAGCAAAGCGACCGAGCACATTACATTAGCCATCGAGCGG 1173
BSNT_04599___ 1177 TTCTCAAACGGAAACGAGGA---GCAAAGCGAAAAGGTTGAATCCAGCTC 1223
|||||||.||| ||..|| .|||||||||||.||.|||...|||||
BL02582 1174 TTCTCAAGCGG---CGCTGAAAGTCAAAGCGAAAAAGTCGAAGAAAGCTC 1220
BSNT_04599___ 1224 TCATCAGCTGAACTTAATGAAT--GAAG--GACTCCA---GCA--AGTCT 1264
.||.|.|||.|.|..||||||| |||| ||.|..| ||| .||.|
BL02582 1221 ACAGCGGCTCAGCCAAATGAATGAGAAGCTGAATGAAATTGCAGGCGTGT 1270
BSNT_04599___ 1265 CACAAACATCGTCAGATATTACAAAGGCATCTATCC-------AATCAAC 1307
||.| |||| ||||||.| |||| ||||.||
BL02582 1271 CAGA---ATCG------ATTACAGA-------ATCCTCGGGTAAATCGAC 1304
BSNT_04599___ 1308 GGAAATCGCCGGAACGGGTGAGA-AGTTTGTGCAGCAGACAGTCGGACAA 1356
||||||.||||.|||.||.| || ||.|.||.||.||.||.|||||.||.
BL02582 1305 GGAAATTGCCGAAACAGGCG-GAGAGCTCGTCCAACAAACCGTCGGGCAG 1353
BSNT_04599___ 1357 ATGAACTCGATTAATCA-ATCTGTTCAGCAGGCTGAAGCTGTTGTCAAA- 1404
|||||||||||.|| || .|||||..|.|||||||||...|||||||||
BL02582 1354 ATGAACTCGATCAA-CAGGTCTGTCAAACAGGCTGAACAGGTTGTCAAAG 1402
BSNT_04599___ 1405 GGCTTAGAAGGAAAATCAAAAGACATCACAAGC-ATTTTGAGAGTCATCA 1453
||||| ||||..|||||.|||||.||||| .|| ||..||.|.|||||.|
BL02582 1403 GGCTT-GAAGCGAAATCGAAAGATATCAC-CGCGATCCTGCGCGTCATAA 1450
BSNT_04599___ 1454 ACGGAATCGCTGACCAAACAAATCTGCTTGCACTAAATGCAGCCATTGAA 1503
||||||||||.||.|||||.|||.|..|.||.||.||.||.|||||.||.
BL02582 1451 ACGGAATCGCCGATCAAACGAATTTATTAGCTCTGAACGCCGCCATCGAG 1500
BSNT_04599___ 1504 GCGGCGCGTGCCGGAGAGTCAGGACGCGGCTTCTCTGTCGTAGCGGAGGA 1553
||.|||||.|||||.||.|||||..|.||||||||.||.||.||.||.||
BL02582 1501 GCAGCGCGGGCCGGCGAATCAGGCAGAGGCTTCTCGGTTGTCGCTGAAGA 1550
BSNT_04599___ 1554 GGTGCGCAAGCTGGCTGTCCAATCAGCCGATTCAGCGAAAGAAATCGAAA 1603
.||..|.|||||.||.|..||||||||.|..||.||.||||||||||||.
BL02582 1551 AGTCAGAAAGCTTGCGGCTCAATCAGCGGGATCGGCAAAAGAAATCGAAG 1600
BSNT_04599___ 1604 AGCTGATCCAAGAAATCGTCGCAGAAATCGAAACCTCTCTTCACATGTTT 1653
.||||||.||.||.|||||....|||||||||...||.||..|||||||.
BL02582 1601 CGCTGATTCAGGATATCGTTAAGGAAATCGAACATTCGCTCAACATGTTC 1650
BSNT_04599___ 1654 AAAGAGGTCAATCAGGAAGTACAGTCCGGACTTGTTGTCACAGACAATAC 1703
|||..||||||.||||||||||||||.||||| .||.|.|||
BL02582 1651 AAATCGGTCAACCAGGAAGTACAGTCAGGACT---------CGAAATTAC 1691
BSNT_04599___ 1704 AAAAGAAA--GCTTCCAG--------AGCATTTTCAGCATGACAAACGAA 1743
..|||||| |..||.|| | |||||.|..|||||||||||||
BL02582 1692 CGAAGAAACGGAATCTAGTTTTAAACA-CATTTACGACATGACAAACGAA 1740
BSNT_04599___ 1744 ATCGCAGGCAAGCTGCAAACGATGAATTCCACCGTCGAGCAGCTGTCAGA 1793
|||||||||||||||||||||||||||.||.||||.|||||..|.||| |
BL02582 1741 ATCGCAGGCAAGCTGCAAACGATGAATGCCGCCGTAGAGCATTTATCA-A 1789
BSNT_04599___ 1794 C-CGTTCACAGCATGTTTCAGCAGCAGTC--AGCGGCATTGCAGACGTGT 1840
| .||||.||..|..|.||.|..||.||| ||.| ||.||.|||||.|
BL02582 1790 CAGGTTCTCACGAAATATCCGATGCGGTCGAAGAG--ATCGCCGACGTAT 1837
BSNT_04599___ 1841 CGAAAGAAAGCTCGGCAAGCATCCAGGACATTGCCGCATCAGCTGAAGAA 1890
||...||||||||.||..||||.||||||||.|||||.|||||.||||||
BL02582 1838 CGCGTGAAAGCTCTGCCGGCATTCAGGACATCGCCGCTTCAGCGGAAGAA 1887
BSNT_04599___ 1891 CAGCTTGCTTCCATGGAAGAAATCAGTTCCTCAGCGACCACTCTTGCGCA 1940
|||||.||||||||||||||||||||.||.||.||..|.||.||.|..||
BL02582 1888 CAGCTGGCTTCCATGGAAGAAATCAGCTCATCCGCTGCAACGCTCGAACA 1937
BSNT_04599___ 1941 GATGGCAGAAGAGCTTCGCGATCTGACGAAACAATTTAA-AATCGAGTAA 1989
||||||.||||||||.||||||.|.||||||.|.||||| |.|.||
BL02582 1938 GATGGCTGAAGAGCTGCGCGATTTAACGAAAAAGTTTAAGATTTGA---- 1983
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