Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04567 and BL02564
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:43
# Commandline: needle
# -asequence dna-align/BSNT_04567___gbsA.1.5803.seq
# -bsequence dna-align/BL02564___gbsA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04567___gbsA-BL02564___gbsA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04567___gbsA-BL02564___gbsA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04567___gbsA
# 2: BL02564___gbsA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1493
# Identity: 1135/1493 (76.0%)
# Similarity: 1135/1493 (76.0%)
# Gaps: 40/1493 ( 2.7%)
# Score: 4231.0
#
#
#=======================================
BSNT_04567___ 1 ATGAGTCAAACATTATTCATTGACGGAGAATGGATCAGTGCCGAAAAAGA 50
||||||||||||.|.||||||||||||.|.|||.|..|.|||.||||||.
BL02564___gbs 1 ATGAGTCAAACACTTTTCATTGACGGAAAGTGGGTGGGCGCCAAAAAAGG 50
BSNT_04567___ 51 ACAGATCCGCAGTATTATCAACCCATTTAATCAAGAAGAAATTGCAACTG 100
..|||..|||...||||||||.||.|..||||||||..|.||||.|||.|
BL02564___gbs 51 CGAGACTCGCCAAATTATCAATCCTTACAATCAAGAGCATATTGAAACCG 100
BSNT_04567___ 101 TAAGCGAGGGAGGGCGAGAGGACGCCATCAAAGCAATCGCAGCCGCACGC 150
|.||.||.||||...||||.|||||..|.|..||.||.||.||.||.|||
BL02564___gbs 101 TCAGTGAAGGAGACAGAGAAGACGCTGTTAGGGCGATTGCTGCAGCGCGC 150
BSNT_04567___ 151 AGAGCATTTGACAAAGGAGAATGGTC--AT-CGCTATCCGGG-CTTGAAC 196
.|.|||||||||.|.||.||.|||.| || || ||||| |||||||
BL02564___gbs 151 CGCGCATTTGACGACGGCGAGTGGGCGAATACG----CCGGGTCTTGAAC 196
BSNT_04567___ 197 GCGGAAAAATTGTTCTGAAAATTGCGGAATTAATCAGACGTGATCTTGAG 246
|.||.||.||.||..|.||.||.||.|||.|.||||||||.||.|..||.
BL02564___gbs 197 GAGGCAACATCGTATTAAAGATCGCCGAACTGATCAGACGCGACCACGAA 246
BSNT_04567___ 247 GAGCTGGCTGAGCTTGAATCTCTTGATACAGGAAAAACACTCGAAGAAAG 296
||||||||.||.||||||||.||||||||.||.||.||..|.||||||||
BL02564___gbs 247 GAGCTGGCAGAACTTGAATCGCTTGATACCGGCAAGACGATTGAAGAAAG 296
BSNT_04567___ 297 CAAGGCCGATATGGACGATATCGCCAATGTTTTTCAATATTACGC-CGGC 345
||..|||||||||||.|||||.||.||.||.|||||||||||.|| .|||
BL02564___gbs 297 CAGAGCCGATATGGATGATATTGCAAACGTATTTCAATATTATGCAGGGC 346
BSNT_04567___ 346 TTGGCAGACAAAGATGGCGGAGAGATCGTTTCATCTCCGATTCCTGATTC 395
|| ||.||.|||||.||||||||..||.||||.||.|||||.||.|||||
BL02564___gbs 347 TT-GCGGATAAAGACGGCGGAGAAGTCATTTCTTCACCGATCCCCGATTC 395
BSNT_04567___ 396 AGAAAGCAAAATTATTAGAGAGCCAATCGGGGTTTGCGGCCAGATCACTC 445
..|||||||||||.|.||.|||||..||||.||.|||||.||||||||.|
BL02564___gbs 396 TAAAAGCAAAATTGTCAGGGAGCCGGTCGGTGTCTGCGGGCAGATCACAC 445
BSNT_04567___ 446 CATGGAATTATCCGCTCCTTCAAGCGAGCTGGAAAATCGCCCCTGCACTG 495
|.|||||.|||||||||||.||.||.||||||||||||||.||.||..||
BL02564___gbs 446 CGTGGAACTATCCGCTCCTGCAGGCAAGCTGGAAAATCGCTCCGGCTTTG 495
BSNT_04567___ 496 GCTGCAGGAAACACAATCGTCATGAAGCCGAGTGAGATTACGCCGCTGAC 545
||.||.||.|||||.|||||..|.||.||.|||||.||.||.||||||||
BL02564___gbs 496 GCGGCGGGCAACACGATCGTTGTCAAACCAAGTGAAATCACACCGCTGAC 545
BSNT_04567___ 546 GACAATCAAAGTCTTTAAGCTGATGGAAGAAGCCGGTGTACCAAAAGGTG 595
.||.||.||..||||.|||||||||||||||||||||||.||..||||.|
BL02564___gbs 546 AACCATTAAGATCTTCAAGCTGATGGAAGAAGCCGGTGTGCCTGAAGGGG 595
BSNT_04567___ 596 TCGCAAATCTTGTCCTTGGACCGGGAGCCACAGTGGGCGACGAGCTTGCC 645
|.||.||.|||||.||.||.||.||.||.||.||.|||||.||.||||||
BL02564___gbs 596 TGGCCAACCTTGTTCTCGGCCCCGGGGCGACTGTCGGCGATGAACTTGCC 645
BSNT_04567___ 646 GTAAACAAAGACGTCGATTTGATTTCGTTTACGGGCGGAATTGAAACAGG 695
..|||.|||||||||||.||.|||||.||.||.||||||||||||||.||
BL02564___gbs 646 AGAAATAAAGACGTCGACTTAATTTCCTTCACCGGCGGAATTGAAACCGG 695
BSNT_04567___ 696 CAAAAAAATCATGCGGGCGGCAAG--CGGAAACGTCAAAAAAATCGCCCT 743
.||.||||||||||.|||.||||| || ||.||.||||||||.||.||
BL02564___gbs 696 AAAGAAAATCATGCAGGCTGCAAGTACG--AATGTGAAAAAAATTGCGCT 743
BSNT_04567___ 744 TGAACTTGGCGGGAAAAACCCAAATATTGTTTTCAAGGACGCGGATTTAG 793
|||.||||||||||||||.||.||||||||.||.||.|||||.|||||.|
BL02564___gbs 744 TGAGCTTGGCGGGAAAAATCCGAATATTGTGTTTAAAGACGCAGATTTTG 793
BSNT_04567___ 794 AAGTTGCGGTTGATCAGGCCTTAAACGCTGTATTTTTCCACGCCGGCCAA 843
|.||.||||||||.|||||..|.||.||.||||||||||||||.||.||.
BL02564___gbs 794 ACGTAGCGGTTGACCAGGCGCTGAATGCGGTATTTTTCCACGCAGGACAG 843
BSNT_04567___ 844 GTATGCTCTGCAGGTTCCCGCT----TGCTTGTTGAGGATGCCATTCATG 889
||.||||||||.|| |||| |.||.|||||.||..|||||||.|
BL02564___gbs 844 GTTTGCTCTGCGGG----CGCTCGTCTTCTCGTTGAAGAGTCCATTCAAG 889
BSNT_04567___ 890 ATCAATTTTTGGCGGAGCTGGTCAAACGGGCAAAACGCATAAAACTCGGA 939
||.|.|||.|.||.|||||.|||||.||.||.|||...||.||.||.||.
BL02564___gbs 890 ATGAGTTTGTCGCAGAGCTTGTCAAGCGTGCGAAAAAAATCAAGCTTGGC 939
BSNT_04567___ 940 AACGGTTTTCATGCTGAGACAGAAAGCGGTCCGCTTATTTCGGCGGAGCA 989
|||||.|||||.|..||||||.|.|||||||||||||||||.||.||.||
BL02564___gbs 940 AACGGATTTCACGAGGAGACACAGAGCGGTCCGCTTATTTCAGCTGAACA 989
BSNT_04567___ 990 CAG-GGCAAAGGTAGAAAAATATGTAGAGATCGGAATAGAGGAAGGCGCG 1038
|.| .||||| ||.|||||||||||.||.|||||..|..|.||||||||.
BL02564___gbs 990 CCGCAGCAAA-GTTGAAAAATATGTGGAAATCGGCTTGCAAGAAGGCGCC 1038
BSNT_04567___ 1039 AAGCTGGAGACAGGAGGCAAACGCCCGGAAGACCCTGCGCTTCAAAACGG 1088
||||||||.|||||.||.|||||.|||||.|||||||..|||..|||.||
BL02564___gbs 1039 AAGCTGGAAACAGGCGGAAAACGTCCGGAGGACCCTGAACTTGCAAATGG 1088
BSNT_04567___ 1089 CTTTTTCTATGAACCTACTATTTTCTCAAACTGTAATTCTGACATGAGAA 1138
|||.||||||...||.||.||.|||||.|.|||||..||.||.|||||||
BL02564___gbs 1089 CTTCTTCTATCTGCCGACAATCTTCTCGAGCTGTACATCAGATATGAGAA 1138
BSNT_04567___ 1139 TCGTTCAGGAAGAGGTTTTCGGTCCGGTATTGACAGTCGAAACCTTCAGC 1188
|||||.|||||||.||.||||||||||||||.|||||.|||||.||.|..
BL02564___gbs 1139 TCGTTAAGGAAGAAGTATTCGGTCCGGTATTAACAGTTGAAACATTTAAA 1188
BSNT_04567___ 1189 TCTGAAGAAGAGGTAATCGAGCTTGCGAATGATACCATCTATGGCTTGGC 1238
.|.|||||||||||..||...||||||||.|||||.||.||.|||.|.||
BL02564___gbs 1189 ACAGAAGAAGAGGTTGTCTCACTTGCGAACGATACGATTTACGGCCTTGC 1238
BSNT_04567___ 1239 TGGAGCGGTATGGTCAAAAGACATTGAAAAGTGC-GAACGGGTAGCAGCC 1287
.||.||.||.||||||||||||||.||||| .|| ||.||.||
BL02564___gbs 1239 CGGCGCCGTTTGGTCAAAAGACATCGAAAA-AGCGGAGCGCGT------- 1280
BSNT_04567___ 1288 CGCT-------TGAGAATGGGAACCGTTTGGATCAACGATTTTCATCCGT 1330
|||| ||.|.|||||||||||.||||||||.||.||.||.||.|
BL02564___gbs 1281 CGCTTCCAAACTGCGCATGGGAACCGTCTGGATCAATGACTTCCACCCTT 1330
BSNT_04567___ 1331 ACTTTGCACAAGCGCCATGGGGCGGATATAAGCAATCCGGGTTCGGACGC 1380
|.||.|||||||||||.|||||.||.||.|||||.||.||..||||.|||
BL02564___gbs 1331 ATTTCGCACAAGCGCCTTGGGGAGGTTACAAGCAGTCAGGCATCGGCCGC 1380
BSNT_04567___ 1381 GAGCTTGGAAAAATAGGCCTTGAAGAATACACAGAAGTCAAACATGTATA 1430
||||||||....||.|||||||||||||||||||||||.||.|||||.||
BL02564___gbs 1381 GAGCTTGGCCGCATGGGCCTTGAAGAATACACAGAAGTGAAGCATGTCTA 1430
BSNT_04567___ 1431 CCGCAATACAAAACCGGCAGCGGTTAACTGGTTCAATTCATAA 1473
|||||||||.||||||||.||.||.||.|||||.||..|||||
BL02564___gbs 1431 CCGCAATACGAAACCGGCGGCTGTCAATTGGTTTAAAGCATAA 1473
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