Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04566 and BL02563
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:43
# Commandline: needle
# -asequence dna-align/BSNT_04566___gbsB.1.5803.seq
# -bsequence dna-align/BL02563___gbsB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04566___gbsB-BL02563___gbsB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04566___gbsB-BL02563___gbsB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04566___gbsB
# 2: BL02563___gbsB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1220
# Identity: 968/1220 (79.3%)
# Similarity: 968/1220 (79.3%)
# Gaps: 19/1220 ( 1.6%)
# Score: 3843.0
#
#
#=======================================
BSNT_04566___ 1 ATGATGACATTAAATATGAAGGTAGAAAGC-ATGCAGAAATTCCACACAT 49
|||||.|||||||||||.|||| |||| |||.|.|||||||||||.|
BL02563___gbs 1 ---ATGACTTTAAATATGAAAGTAG-AAGCGATGAACAAATTCCACACGT 46
BSNT_04566___ 50 TTGAAATTCCGACTGTGATTAAGCATGGAATCGGAGCCATCAAGCATACG 99
|||||||.||.||.||.||||||||.||||||||||||.|.||.|||..|
BL02563___gbs 47 TTGAAATCCCTACCGTCATTAAGCACGGAATCGGAGCCGTTAAACATGTG 96
BSNT_04566___ 100 GGTGAGGAAGT-----AGCTGCACTGGGCGTTTCAAAAGCGCTCCTTGTC 144
||.||.||||| || ||.|||||||||||||||||.||||||
BL02563___gbs 97 GGGGAAGAAGTGAAAAAG-----CTTGGCGTTTCAAAAGCGCTGCTTGTC 141
BSNT_04566___ 145 ACAGACCCAGGGATTTATAAAGCCGGTGTTGCTGATCCTGTAATCGAATC 194
||||||||.||.||.||.|||||||||||..|..|.||.||..|.|.|||
BL02563___gbs 142 ACAGACCCTGGCATCTACAAAGCCGGTGTAACAAACCCGGTCGTTGTATC 191
BSNT_04566___ 195 ACTTAAAGAAGCAGGCATTGAAGTGGTGC--TCTTTAATAAAGTTGAGCC 242
.|||.|.|||||||||.|.||||| ||| |||||||||||||.|||||
BL02563___gbs 192 CCTTCAGGAAGCAGGCGTAGAAGT--TGCCGTCTTTAATAAAGTCGAGCC 239
BSNT_04566___ 243 AAACCCGCCTGTCCGTCTGGTGAATGAAGGATCTGAGCTTTACAAAAAAG 292
.||.||||||||||||||.||...||||||.||..|.||.||.....|||
BL02563___gbs 240 GAATCCGCCTGTCCGTCTTGTCGCTGAAGGTTCCAAACTGTATGCTGAAG 289
BSNT_04566___ 293 AGAACTGTAATGGTTTGGTGGCAGTCGGAGGCGGAAGCTCCATGGATACA 342
|.|||||..|.||..|.||.||.|||||.|||||||||||.||||||||.
BL02563___gbs 290 AAAACTGCGACGGCCTTGTCGCGGTCGGCGGCGGAAGCTCAATGGATACG 339
BSNT_04566___ 343 GCAAAAGCAATCGGAGTAGAAGCGACTCACGAAGGAAGCGTGCTTGATTA 392
||.|||||.||||||||.|||||.|||||.|||||....||.|||||.||
BL02563___gbs 340 GCGAAAGCGATCGGAGTTGAAGCCACTCATGAAGGCTCAGTCCTTGACTA 389
BSNT_04566___ 393 TGAAGCGGCAGATGGGAAAAAACCGCTGGAAAACCGCATTCCTCCGCTGA 442
||||||||||||.||.|||||.|||||.||||||||.|||||||||||.|
BL02563___gbs 390 TGAAGCGGCAGAAGGAAAAAAGCCGCTTGAAAACCGGATTCCTCCGCTTA 439
BSNT_04566___ 443 CGACAATTCCCACTACAGCTGGAACAGGATCAGAAGTAACCCAATGGGCG 492
|.||.||.||.||.||.||.|||||.||.||||||||.||.|||||||||
BL02563___gbs 440 CAACGATCCCGACGACTGCCGGAACCGGCTCAGAAGTTACACAATGGGCG 489
BSNT_04566___ 493 GTTATCACAGATGAAGAAAGAGAATTCAAATTCAACACGGGCGGTCCGCT 542
|||||||||||||||||..|.|||||.||||||||.||||||||.|||||
BL02563___gbs 490 GTTATCACAGATGAAGAGCGCGAATTTAAATTCAATACGGGCGGCCCGCT 539
BSNT_04566___ 543 GATTGCAGCGCACTTGACCATCATTGATCCTGAGCTTCATGTTTCAATGC 592
||||||.||.||.|||||.||.||.||||||||..|.|||||.|||||||
BL02563___gbs 540 GATTGCTGCTCATTTGACAATTATCGATCCTGAATTGCATGTATCAATGC 589
BSNT_04566___ 593 CTCCGCATGTAACAGCTATGACGGGAATTGATGCGCTCGCCCATGCCATT 642
|||||||.||||||||.|||||.||..||||.||..|.||.||||||||.
BL02563___gbs 590 CTCCGCACGTAACAGCGATGACCGGCGTTGACGCTTTGGCTCATGCCATC 639
BSNT_04566___ 643 GAGTGCTATACAATGAAATTTGCACAGCCAATCACGGATGCGGTTGCCTT 692
|||||||||||.|||||||||||.|||||.||.||.||.|||||.|||.|
BL02563___gbs 640 GAGTGCTATACGATGAAATTTGCCCAGCCGATTACTGACGCGGTGGCCCT 689
BSNT_04566___ 693 AATGGCGATTGAGTATGCCGCTCATTACATTAAGAGGGCATTTGCTGACG 742
..|.|||||.||.||.|.|||.||||||||....||.||.|||||.||.|
BL02563___gbs 690 TCTTGCGATCGAATACGGCGCACATTACATCCGCAGAGCGTTTGCCGATG 739
BSNT_04566___ 743 GAGAGGATCTGGAAGCAAGGTACGGAATGGCGCAGGCTGCGATGCTTGCC 792
||||.|||||.|||||.||.|||||.|||||||||||.||.||||||||.
BL02563___gbs 740 GAGAAGATCTTGAAGCGAGATACGGCATGGCGCAGGCGGCCATGCTTGCA 789
BSNT_04566___ 793 GGTCTTTCTTACGGAAGTGAATCAGCGGGCGCGGCTCATGCGATGAGCCA 842
||.||||||||||||||.|||||.||.|||||.|||||.|||||||||||
BL02563___gbs 790 GGCCTTTCTTACGGAAGCGAATCCGCAGGCGCTGCTCACGCGATGAGCCA 839
BSNT_04566___ 843 AACGCTTGGCGGTATTATCCCAGTCGCTCACGGCCAATGTGTAGCGGCGA 892
.|||||.||.||.||.|||||.|||||.||||||||||||||.|||||||
BL02563___gbs 840 GACGCTCGGAGGGATCATCCCTGTCGCGCACGGCCAATGTGTGGCGGCGA 889
BSNT_04566___ 893 TGATGGGCCCTGTCATGGAATACAACTGGAAGGGCTATCCTGAGAAGTTT 942
|||||||||||||.|||||||||||||||||.|||||.|||||.||.|||
BL02563___gbs 890 TGATGGGCCCTGTAATGGAATACAACTGGAAAGGCTACCCTGAAAAATTT 939
BSNT_04566___ 943 GCGCGTATTGCGAAAGCGTTCGGTATTGATACAAGCAAGATGACAACAGA 992
||.||.|||||.|||||||||||.|||||.||||||...|||.|..|||.
BL02563___gbs 940 GCCCGCATTGCAAAAGCGTTCGGAATTGACACAAGCGGCATGTCTGCAGT 989
BSNT_04566___ 993 AGAAGCTGCGAAAGCATCTGTCAATTGGATGTATGATCTGGTCGAAGATT 1042
.|||||.||.|||||..|.||.||.|||||||||.|.||.||.|||||.|
BL02563___gbs 990 TGAAGCGGCTAAAGCTGCGGTGAACTGGATGTATCAGCTTGTGGAAGACT 1039
BSNT_04566___ 1043 TAGAAGTGCCGACTTTAGAAGAGCAGGGAGTATCACCTGATATGATCGAA 1092
||||..|.||.|.|.|.||||||||.||.|||||||||||.||||||||.
BL02563___gbs 1040 TAGAGATTCCTAGTCTTGAAGAGCAAGGCGTATCACCTGACATGATCGAC 1089
BSNT_04566___ 1093 CGCTTGTCTAAAGAAGCTATGAAAGATCCGCAAACCTTCGGAAACCCTAG 1142
|||.|.||.||||||||.|||||||||||||||||..||||.||||||||
BL02563___gbs 1090 CGCCTTTCAAAAGAAGCGATGAAAGATCCGCAAACGGTCGGTAACCCTAG 1139
BSNT_04566___ 1143 AGATTTAAATGAAAAAGCATACAACTGGATCTACAAGCGCTGCTTTAACC 1192
|||..|.||.||||||||.|||||.|||||.|||||.||||||||.||..
BL02563___gbs 1140 AGACCTGAACGAAAAAGCGTACAATTGGATTTACAAACGCTGCTTCAATT 1189
BSNT_04566___ 1193 TTACGCCTAAAACGGTATAA 1212
|.||.||.|||||.||.|.|
BL02563___gbs 1190 TAACCCCGAAAACTGTCTGA 1209
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