Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04659 and BL02550
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:48
# Commandline: needle
# -asequence dna-align/BSNT_04659___mrpG.1.5803.seq
# -bsequence dna-align/BL02550___mrpG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04659___mrpG-BL02550___mrpG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04659___mrpG-BL02550___mrpG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04659___mrpG
# 2: BL02550___mrpG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 398
# Identity: 260/398 (65.3%)
# Similarity: 260/398 (65.3%)
# Gaps: 46/398 (11.6%)
# Score: 795.0
#
#
#=======================================
BSNT_04659___ 1 ATGATCGAAACCGCTAAAGTCGTTGTGGCTGTATTCATTTTGCTGGGTGC 50
|||||||||.||||||||.|..||.|.||.||.||.||..|.||.||.||
BL02550___mrp 1 ATGATCGAAGCCGCTAAATTGCTTATCGCCGTTTTGATCCTTCTTGGCGC 50
BSNT_04659___ 51 TCTTGTAT-----GCCTCATTGCTTCATTTGG--CGTACTTCGCCTTCCC 93
.||..||| ||| |||||.||||| || |||.|.||.||.
BL02550___mrp 51 ACTGATATCGTTAGCC-----GCTTCCTTTGGAACG--CTTAGGCTGCCT 93
BSNT_04659___ 94 GATGTGTTTACACGCGCT--------CATGCTGCTTCTAAAGGCTCAACA 135
|| .|||.| || ||.||.|||||.|||||..|.|||
BL02550___mrp 94 GA----CTTATA----CTCAAGAATCCACGCCGCTTCAAAAGGAGCGACA 135
BSNT_04659___ 136 TTGGGTGTCAATATGATTCTGCTTGGTGTCTTCTTCTATTTGTGGTTTGT 185
.||||..|||..|...|.|||||.||.||.|||||.||.||.||||||.|
BL02550___mrp 136 CTGGGGATCATCAGCGTGCTGCTCGGCGTATTCTTTTACTTCTGGTTTCT 185
BSNT_04659___ 186 G-ACGGGGGAACTCT------CCGCTAAAATCCTGCTTGGGATTCTCTTT 228
| |||| || |.||.|||.|.|||||.||.||..|||||
BL02550___mrp 186 GCACGG-------CTTCATTACGGCAAAAGTGCTGCTCGGTATCGTCTTT 228
BSNT_04659___ 229 ATCTTTATTACGTCGCCTATCGGCGGGCACTTGATCTGC-CGTGCTGCGT 277
.|.|||.|.|||||.|||.|.||||.||||.||||| || .|.||.||||
BL02550___mrp 229 GTATTTCTGACGTCTCCTGTAGGCGCGCACCTGATC-GCAAGAGCCGCGT 277
BSNT_04659___ 278 ATAACTCCGGCGTCAAGCTTGATGAGAGAAGCGTACAGGATGACTATAAC 327
||||..|.|||||.||..|.||..|||.||.|||||||||.||.|||.|.
BL02550___mrp 278 ATAATACAGGCGTTAAAATGGAAAAGAAAACCGTACAGGACGATTATGAA 327
BSNT_04659___ 328 GGAATCAGAAACTTTGTGATTAAACGAAAAGAGGATTCTTATTTATAA 375
||...||||||.|||.||||||||...||.||.|||||.|||||||||
BL02550___mrp 328 GGCTACAGAAATTTTCTGATTAAAAAGAAGGAAGATTCCTATTTATAA 375
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