Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04658 and BL02549

See Amino acid alignment / Visit BSNT_04658 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:48
# Commandline: needle
#    -asequence dna-align/BSNT_04658___mrpF.1.5803.seq
#    -bsequence dna-align/BL02549___mrpF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04658___mrpF-BL02549___mrpF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04658___mrpF-BL02549___mrpF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04658___mrpF
# 2: BL02549___mrpF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 285
# Identity:     214/285 (75.1%)
# Similarity:   214/285 (75.1%)
# Gaps:           0/285 ( 0.0%)
# Score: 786.0
# 
#
#=======================================

BSNT_04658___      1 ATGTTTACGCTGATCCTGCAAATCGCGCTCGGCATTATGGCAGTGTCTAC     50
                     ||||||....|.||..|||||.|..|.|||||||||.||||.||.||.||
BL02549___mrp      1 ATGTTTGAATTTATTTTGCAATTGTCACTCGGCATTTTGGCGGTCTCCAC     50

BSNT_04658___     51 CTTTTTGTATGTCATTCGTGTCATTAAAGGGCCGACTGTGCCTGACCGGG    100
                     .|||.||||||||.|..|.||||||||||||||||...|.||.|||.|.|
BL02549___mrp     51 TTTTCTGTATGTCCTGAGGGTCATTAAAGGGCCGAGCATCCCGGACAGAG    100

BSNT_04658___    101 TGGTGGCTCTGGATGCAATCGGCATCAATCTGATCGCAATCACGGCGCTT    150
                     |||||||.||.|||||.|||||||||||..|.||||.|||.|||||.||.
BL02549___mrp    101 TGGTGGCGCTTGATGCGATCGGCATCAACTTAATCGGAATTACGGCTCTC    150

BSNT_04658___    151 GTCTCCATTTTGCTGAAAACAAGTGCGTTTTTGGATATTATTTTGCTGCT    200
                     ||.|||||..||.|.||.||.|..||.|.||||||..|.||..|..||.|
BL02549___mrp    151 GTGTCCATCCTGTTAAATACGACAGCATATTTGGAAGTCATCCTCTTGAT    200

BSNT_04658___    201 GGGGATTTTATCGTTTATCGGAACAATCGCATTTTCCAAGTTCCTGGAGA    250
                     .||.|||.|..|.||.|||||.||..||||||||||.||.|||||.||||
BL02549___mrp    201 CGGCATTCTGGCCTTCATCGGCACCGTCGCATTTTCTAAATTCCTTGAGA    250

BSNT_04658___    251 AAGGAGAGATTATCGAAAATGATCGAAACCGCTAA    285
                     |||||||||||||||||||||||||||.|||||||
BL02549___mrp    251 AAGGAGAGATTATCGAAAATGATCGAAGCCGCTAA    285


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