Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04653 and BL02546

See Amino acid alignment / Visit BSNT_04653 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:48
# Commandline: needle
#    -asequence dna-align/BSNT_04653___mrpC.1.5803.seq
#    -bsequence dna-align/BL02546___mrpC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04653___mrpC-BL02546___mrpC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04653___mrpC-BL02546___mrpC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04653___mrpC
# 2: BL02546___mrpC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 346
# Identity:     260/346 (75.1%)
# Similarity:   260/346 (75.1%)
# Gaps:           8/346 ( 2.3%)
# Score: 946.0
# 
#
#=======================================

BSNT_04653___      1 ATGGAAATCTTAACGGC-TGTATTAGCCGGTATTATTTTTATGGCTGCTA     49
                     |||||.||.||||.|.| |.|||| |..||.|||.|.||.|||||.||.|
BL02546___mrp      1 ATGGAGATTTTAATGTCTTTTATT-GTAGGAATTCTGTTCATGGCGGCGA     49

BSNT_04653___     50 CGTATTTGCTGCTGTCTAAAAGCCTGCTTCGCGTCATTATCGGAACAGCA     99
                     |.|||.|||||||.||.||||||||..|..|.||.|||||||||||.||.
BL02546___mrp     50 CTTATCTGCTGCTTTCCAAAAGCCTTTTGAGGGTGATTATCGGAACTGCC     99

BSNT_04653___    100 CTGTTAAGCCATGGCGTTCATTTAATGCTTT---TGACTATGGGAGGATT    146
                     .|..|.|||||||||||.|||   .||||||   ||||.||||||||.||
BL02546___mrp    100 GTTCTCAGCCATGGCGTCCAT---CTGCTTTTGCTGACGATGGGAGGGTT    146

BSNT_04653___    147 AAAGAAAGGCGCCGCTCCGATTTTGAGCGAGCATGCCAAATCATTTGTCG    196
                     |||.|||||.||..|.||.|||||||..||..|..|.|.|.|.|.|||||
BL02546___mrp    147 AAAAAAAGGAGCGCCCCCCATTTTGAATGAAGAGTCGACAACCTATGTCG    196

BSNT_04653___    197 ATCCGCTTCCGCAAGCCCTGATTTTGACCGCAATTGTCATTTCTTTTGGC    246
                     ||||.||.||.||.||..|||||||.||.||.||.||||||.||||.||.
BL02546___mrp    197 ATCCTCTCCCTCAGGCGTTGATTTTAACGGCGATCGTCATTGCTTTCGGG    246

BSNT_04653___    247 GTTACATCATTCATCCTCGTTATGGCCTTTCGCGCTTATCAGGAATTGAA    296
                     |||||.||.||..||||.||.|||||.||.|||||.|||||.||..||||
BL02546___mrp    247 GTTACCTCGTTTCTCCTGGTCATGGCTTTCCGCGCCTATCAAGAGCTGAA    296

BSNT_04653___    297 ATCGGACGATATGGATCAAATGAGGGGAAATGATCAACATGAATAA    342
                     |..|||.|||||||||||||||||||||||||||||||||||||||
BL02546___mrp    297 AATGGATGATATGGATCAAATGAGGGGAAATGATCAACATGAATAA    342


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