Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04652 and BL02545
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:48
# Commandline: needle
# -asequence dna-align/BSNT_04652___mrpB.1.5803.seq
# -bsequence dna-align/BL02545___mrpB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04652___mrpB-BL02545___mrpB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04652___mrpB-BL02545___mrpB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04652___mrpB
# 2: BL02545___mrpB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 438
# Identity: 313/438 (71.5%)
# Similarity: 313/438 (71.5%)
# Gaps: 12/438 ( 2.7%)
# Score: 1071.0
#
#
#=======================================
BSNT_04652___ 1 GTGAATGAACAAA-----AAACAAATGACTTGATTCTTCAAACCGCGACA 45
.|||| ||| |.||.|||||..||||.||.|||||||..|||
BL02545___mrp 1 ----TTGAA-AAAGGTTCAGACGAATGATGTGATCCTGCAAACCGTTACA 45
BSNT_04652___ 46 AAACTTGTATCCTTTATCATTTTGCTTTTCTCTTTCTATTTATTTTTATC 95
||..|||.|||||||||||||.||||.||.||||||.||.|.|||||..|
BL02545___mrp 46 AAGATTGCATCCTTTATCATTCTGCTCTTTTCTTTCCATCTGTTTTTTGC 95
BSNT_04652___ 96 AGGGCATAACGCGCCCGGAGGAGGCTTTGTCGGCGGACTGATCACGTCCT 145
.||.|||||....||.||.||.||.|||.||||||||.||||.|||.|.|
BL02545___mrp 96 CGGCCATAATAACCCGGGCGGCGGTTTTATCGGCGGATTGATGACGGCGT 145
BSNT_04652___ 146 CTTCCATCGTTCTCTTGCTCTTGGCGTATGATTTAAAAACCGTGCGTTCC 195
||||..|.||.||..||||..|.||.||||||||||||||.||||....|
BL02545___mrp 146 CTTCGCTTGTCCTTCTGCTGCTCGCCTATGATTTAAAAACGGTGCAGAAC 195
BSNT_04652___ 196 CTTTTGCCGGTCAATTTCATTTATGTCGCGGGAGCCGGCCTTCTGC-TCG 244
.|.|||||.|||||.||.||.|||||.||||..|.||| |||.|.| |..
BL02545___mrp 196 ATCTTGCCCGTCAACTTTATCTATGTGGCGGCCGTCGG-CTTATTCATTT 244
BSNT_04652___ 245 CTGTATTAACAGGCGTTGGCTCCTTTGTCTTCGGGGCTCCTTTTTTAACC 294
|.||.|..||.||..|.|||||.|||.|.|||||.||||..|||.|..||
BL02545___mrp 245 CCGTTTCCACCGGAATCGGCTCATTTTTGTTCGGCGCTCAGTTTCTTTCC 294
BSNT_04652___ 295 CACACATTCGGATACTTTCAGCTGCCGATCCTTGGGAAAACGGAGCTCGC 344
|||.|.||.|..||||||.|.||.|||.||.|.||||||||||||||.||
BL02545___mrp 295 CACGCGTTTGATTACTTTAACCTTCCGCTCTTGGGGAAAACGGAGCTTGC 344
BSNT_04652___ 345 CACAGCGACGATATTTGATTTAGGCGTTTATCTTGTTGTCGTAGGCATAA 394
|||.|||....|.||||||.|.||.||||||||.||.||.||.|||.|.|
BL02545___mrp 345 CACCGCGGTATTGTTTGATATCGGGGTTTATCTCGTAGTGGTCGGCGTGA 394
BSNT_04652___ 395 CGATGACCATTATTCAAACGATTGGAGAGGAAGAATAA 432
|.||||||||||||||.||||||||.|||..|||||||
BL02545___mrp 395 CCATGACCATTATTCAGACGATTGGGGAGAGAGAATAA 432
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