Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04652 and BL02545

See Amino acid alignment / Visit BSNT_04652 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:48
# Commandline: needle
#    -asequence dna-align/BSNT_04652___mrpB.1.5803.seq
#    -bsequence dna-align/BL02545___mrpB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04652___mrpB-BL02545___mrpB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04652___mrpB-BL02545___mrpB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04652___mrpB
# 2: BL02545___mrpB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 438
# Identity:     313/438 (71.5%)
# Similarity:   313/438 (71.5%)
# Gaps:          12/438 ( 2.7%)
# Score: 1071.0
# 
#
#=======================================

BSNT_04652___      1 GTGAATGAACAAA-----AAACAAATGACTTGATTCTTCAAACCGCGACA     45
                         .|||| |||     |.||.|||||..||||.||.|||||||..|||
BL02545___mrp      1 ----TTGAA-AAAGGTTCAGACGAATGATGTGATCCTGCAAACCGTTACA     45

BSNT_04652___     46 AAACTTGTATCCTTTATCATTTTGCTTTTCTCTTTCTATTTATTTTTATC     95
                     ||..|||.|||||||||||||.||||.||.||||||.||.|.|||||..|
BL02545___mrp     46 AAGATTGCATCCTTTATCATTCTGCTCTTTTCTTTCCATCTGTTTTTTGC     95

BSNT_04652___     96 AGGGCATAACGCGCCCGGAGGAGGCTTTGTCGGCGGACTGATCACGTCCT    145
                     .||.|||||....||.||.||.||.|||.||||||||.||||.|||.|.|
BL02545___mrp     96 CGGCCATAATAACCCGGGCGGCGGTTTTATCGGCGGATTGATGACGGCGT    145

BSNT_04652___    146 CTTCCATCGTTCTCTTGCTCTTGGCGTATGATTTAAAAACCGTGCGTTCC    195
                     ||||..|.||.||..||||..|.||.||||||||||||||.||||....|
BL02545___mrp    146 CTTCGCTTGTCCTTCTGCTGCTCGCCTATGATTTAAAAACGGTGCAGAAC    195

BSNT_04652___    196 CTTTTGCCGGTCAATTTCATTTATGTCGCGGGAGCCGGCCTTCTGC-TCG    244
                     .|.|||||.|||||.||.||.|||||.||||..|.||| |||.|.| |..
BL02545___mrp    196 ATCTTGCCCGTCAACTTTATCTATGTGGCGGCCGTCGG-CTTATTCATTT    244

BSNT_04652___    245 CTGTATTAACAGGCGTTGGCTCCTTTGTCTTCGGGGCTCCTTTTTTAACC    294
                     |.||.|..||.||..|.|||||.|||.|.|||||.||||..|||.|..||
BL02545___mrp    245 CCGTTTCCACCGGAATCGGCTCATTTTTGTTCGGCGCTCAGTTTCTTTCC    294

BSNT_04652___    295 CACACATTCGGATACTTTCAGCTGCCGATCCTTGGGAAAACGGAGCTCGC    344
                     |||.|.||.|..||||||.|.||.|||.||.|.||||||||||||||.||
BL02545___mrp    295 CACGCGTTTGATTACTTTAACCTTCCGCTCTTGGGGAAAACGGAGCTTGC    344

BSNT_04652___    345 CACAGCGACGATATTTGATTTAGGCGTTTATCTTGTTGTCGTAGGCATAA    394
                     |||.|||....|.||||||.|.||.||||||||.||.||.||.|||.|.|
BL02545___mrp    345 CACCGCGGTATTGTTTGATATCGGGGTTTATCTCGTAGTGGTCGGCGTGA    394

BSNT_04652___    395 CGATGACCATTATTCAAACGATTGGAGAGGAAGAATAA    432
                     |.||||||||||||||.||||||||.|||..|||||||
BL02545___mrp    395 CCATGACCATTATTCAGACGATTGGGGAGAGAGAATAA    432


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