Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04642 and BL02538
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:47
# Commandline: needle
# -asequence dna-align/BSNT_04642___dcuS.1.5803.seq
# -bsequence dna-align/BL02538___malK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04642___dcuS-BL02538___malK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04642___dcuS-BL02538___malK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04642___dcuS
# 2: BL02538___malK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1649
# Identity: 1170/1649 (71.0%)
# Similarity: 1170/1649 (71.0%)
# Gaps: 94/1649 ( 5.7%)
# Score: 3902.0
#
#
#=======================================
BSNT_04642___ 1 ATGAAAAAAACATTAAAACTGCAAACCAGACTCACCATATTTGTTTGTAT 50
.||||||||||||||||||||||.||..|..|.||.||||||||.||..|
BL02538___mal 1 TTGAAAAAAACATTAAAACTGCAGACACGGTTAACGATATTTGTCTGCGT 50
BSNT_04642___ 51 CGTTGTATTAATCGCATTGCTCATTACGTTTTTTACAGTCGGTGCCCAAA 100
|||.||.|||||..|.||..|.||..|||||||||..|||||..|..|.|
BL02538___mal 51 CGTCGTTTTAATTTCTTTATTGATCGCGTTTTTTATGGTCGGCTCTGAGA 100
BSNT_04642___ 101 CCACCAAACGA--ATTAGAGATCAGGAAAAGGCCACTGCGCTGCAGACTG 148
||.| ||.|| |||.|.||.|||||..||...|.|||.||||||||.|
BL02538___mal 101 CCGC--AAGGAACATTCGGGAGCAGGAGCAGCAGATTGCCCTGCAGACGG 148
BSNT_04642___ 149 CTGAAATGGTAGCTGAGGCGCCGATGACAGC-----CGCTGCTTTAGAAA 193
|.||.|||||.||.|||||.|||||.||.|| ||||| ||||
BL02538___mal 149 CGGAGATGGTCGCCGAGGCTCCGATTACGGCACAATCGCTG-----GAAA 193
BSNT_04642___ 194 GCGGAAAAAAACAAAAGGAACTGCAGAGCTACACAAAGCGGGTTCAGAAA 243
||||..||.|..|| ||.||.|.||..|||||....||.|||||.|||
BL02538___mal 194 GCGGCGAATACGAA---GAGCTCCGGAAATACACCGCCCGCGTTCAAAAA 240
BSNT_04642___ 244 ATTACCGGCACGGAATTTGTTGTCGTCATGGATATGAACGGTATCCGCAA 293
||.|||...||.|||||.||.||.|||||||||||||||.|.||||||||
BL02538___mal 241 ATCACCCAGACTGAATTCGTCGTTGTCATGGATATGAACAGCATCCGCAA 290
BSNT_04642___ 294 AACTCATCCTGACCCGAGCAAAATCGGAAAAAAATTCAGAGGCGGTGATG 343
|||.||.||.||.||||..|||||||||||.|||||....|||||.||.|
BL02538___mal 291 AACCCACCCCGATCCGAATAAAATCGGAAAGAAATTTGCCGGCGGGGACG 340
BSNT_04642___ 344 AGTCCGAGGTATTAAAAGGGC--ATGTCCATATCAGCACAGCCTCTGGCA 391
|....||.||..| .|||||| |.| |||.||.||.||.||....||||
BL02538___mal 341 AAAAAGAAGTGCT-GAAGGGCCGACG-CCACATTAGTACGGCAAAAGGCA 388
BSNT_04642___ 392 CGCTCGGGAAATCGCAGAGAGCGTTCGTCCCTGTCTACGCGGAGAATGGA 441
|||||||..||||.|.|||.||.|||||.||..||| |.||| |
BL02538___mal 389 CGCTCGGTGAATCACTGAGGGCTTTCGTTCCCATCT------ATAAT--A 430
BSNT_04642___ 442 AAA--------CAGGTCGGTGCAGTCGCGGTCGGCATCACCGTAAATGAA 483
||| ||||||||.||.||.||||||||.||||||.|.||.||.
BL02538___mal 431 AAACGGGCACCCAGGTCGGAGCGGTAGCGGTCGGGATCACCCTTAACGAG 480
BSNT_04642___ 484 ATTGATGAAGTGATCAGCCATAGC-----TTACGGCCGCTTTACTTTA-- 526
|||||..| |||||.|| ||| .|.||.||.||.|| ||
BL02538___mal 481 ATTGAGCA---GATCACCC--AGCAAAATCTCCGCCCTCTATA---TACG 522
BSNT_04642___ 527 -TTATTTGCGTCAGCATCTTCGTCGGTGTGATCGGAGCCGTTATCGTCGC 575
|.||...|.||||||||.|||.|||..|.||||||||.||.|||||.||
BL02538___mal 523 GTCATCGTCCTCAGCATCGTCGCCGGAATCATCGGAGCTGTCATCGTGGC 572
BSNT_04642___ 576 CCGTACAGTGAAAAATATCATGTACGGACTTGAACCTTATGAAATTGCGA 625
..|.|.||||||||..||.||||.|||..|.|||||.|||||||||||.|
BL02538___mal 573 GAGGAAAGTGAAAACGATTATGTTCGGCATGGAACCATATGAAATTGCAA 622
BSNT_04642___ 626 CTCTGCTTGAA-GAACGGAGCGCGATGCTGGAATCGACGAAGGAAGGAAT 674
|.|| .||||| |||||.|||||.|||||.||.|||||.||.|||||.||
BL02538___mal 623 CGCT-TTTGAACGAACGAAGCGCAATGCTTGAGTCGACAAAAGAAGGGAT 671
BSNT_04642___ 675 ACTCGCTGTCGAT-GAACATGGCAAAATTAAACTTGCCAACGCGGAAGCA 723
.|||||.||.||| ||||| ||.|||||.||.||.|||||.||||||||.
BL02538___mal 672 TCTCGCCGTTGATCGAACA-GGAAAAATCAAGCTCGCCAATGCGGAAGCG 720
BSNT_04642___ 724 AAACACCTATTCGTC--AAAATGGGCATC-AACACAAATCCCATTGATCA 770
||.|.|||.|| || ||||||||.||| ||.| .|||||.||.||.|.
BL02538___mal 721 AAGCGCCTGTT--TCAAAAAATGGGGATCGAAGA-GAATCCGATCGACCG 767
BSNT_04642___ 771 GGATGTAGATGACATCTTGCCGAAAAGCCGCTTGAAAAAGGTCATTGAGA 820
|||||||...|||||||||||.||.|||||..|||||.|.||.||.||.|
BL02538___mal 768 GGATGTACTCGACATCTTGCCAAACAGCCGACTGAAACAAGTGATCGAAA 817
BSNT_04642___ 821 CAAAAAAACCTCTTCAAGACAGAGACGTCCGCATTAACGGACTGGAGCTT 870
||.|.||.||..||||.|||.|.||.|||.|.||.||.||.||.||.|||
BL02538___mal 818 CACAGAAGCCCGTTCAGGACCGCGATGTCAGAATCAATGGCCTTGAACTT 867
BSNT_04642___ 871 GTGTTTAATGAAGTTCCTATCCAGCTGAAA----GGACAAACTGTCGGAG 916
||.||||||||||||||.||.|| ||.||| |||.|.|..|||||||
BL02538___mal 868 GTCTTTAATGAAGTTCCGATTCA-CTTAAAAAAGGGAAACATCGTCGGAG 916
BSNT_04642___ 917 CGATTGCAACATTCCGCGACAAGACCGAGGTAAAACATTTAGCTGAACAG 966
|||||||.||||||||||||||.|||||.||.||.||.||||||||.|||
BL02538___mal 917 CGATTGCGACATTCCGCGACAAAACCGAAGTGAAGCACTTAGCTGAGCAG 966
BSNT_04642___ 967 CTTTCCGGTGTTAAAATGTATGCAAACGCACTGAGAGCGCAGTCTCATGA 1016
||.|||||||||||||||||.||||||||.||.||.||||||||.||.||
BL02538___mal 967 CTGTCCGGTGTTAAAATGTACGCAAACGCGCTCAGGGCGCAGTCGCACGA 1016
BSNT_04642___ 1017 ATTTATGAACAAACTGCATGTGATATTAGGTCTCGTCCAGCTGAAAG-AG 1065
.|||||||||||.||.||.||.||..|.|||||.||.|| .|.|||| |.
BL02538___mal 1017 GTTTATGAACAAGCTCCACGTCATTCTCGGTCTTGTTCA-ATTAAAGAAC 1065
BSNT_04642___ 1066 TATGATGATCTTGGAGATTATATTAAAGATATAGCCATACAGCAAAAATC 1115
||.||.||.||||||.|.|||||.|||||.||.||.||..|.||..|.||
BL02538___mal 1066 TACGACGAGCTTGGAAACTATATAAAAGACATTGCGATCTATCAGCAGTC 1115
BSNT_04642___ 1116 AGAAACAAGTGAAATTATAAATGATGTCAAAAGCTCCGTACTGGCCGGTT 1165
.|||.|.||.|.||||||.||..||.||||||.|||.|||||.|||||.|
BL02538___mal 1116 TGAAGCGAGCGGAATTATCAACCATATCAAAAACTCGGTACTCGCCGGCT 1165
BSNT_04642___ 1166 TTCTGCTCGGAAAGCAAAGCTTTATACGTGAGCAGGGCGCAAATC--TTG 1213
||.|||||||.||.||.||||.|||.||.||.|||||.|| .|| |.|
BL02538___mal 1166 TTTTGCTCGGCAAACAGAGCTATATTCGGGAACAGGGGGC--CTCGTTGG 1213
BSNT_04642___ 1214 ATATTGAATGCA--ACGGTGTCATCCCGAACGCGGCAGACCCTTCTGTCA 1261
|..||.|.|||| |||..| ||.|||.|..|.||..||.|..|.||.|
BL02538___mal 1214 AGGTTCATTGCAGCACGAGG--ATTCCGGATACAGCCAACACAGCGGTGA 1261
BSNT_04642___ 1262 TCCATGAACTTATTACAATCATCGGAAATCTCATCAACAATGGCTTAGAC 1311
|.||.||..|.||.||..|.|||||.||.||..|||||||||.|.|.||.
BL02538___mal 1262 TTCACGATTTGATCACCGTTATCGGGAACCTTCTCAACAATGCCCTTGAT 1311
BSNT_04642___ 1312 GCCGTTGCGGATATGCC-----GAAAAAACAAATCACCATGTCCATGCGC 1356
|||||| |..||| |||.|||.|.||..|.||.||..|.|||
BL02538___mal 1312 GCCGTT-----TCCGCCACTGAGAAGAAAAATATTTCGATTTCATTCCGC 1356
BSNT_04642___ 1357 TTCCATAACAG-CATACTTGATATTGAAATTACCGATACTGGAGCAGGCA 1405
...|||.||.| || .||||||||||||.|.||.|||||.||||..||||
BL02538___mal 1357 CATCATGACGGACA-GCTTGATATTGAAGTCACGGATACGGGAGTCGGCA 1405
BSNT_04642___ 1406 TGTCTGAAGAAGACCA--AGCCAAAGTATTTGAACAAGGCTATTCAACAA 1453
|.||..|.||.||.|| || |||.|.|||||.|||||||.||||||||
BL02538___mal 1406 TATCCAAGGAGGAACAGCAG--AAAATGTTTGACCAAGGCTTTTCAACAA 1453
BSNT_04642___ 1454 AGGGCAAAAACCGGGGATTCGGCCTTTATTTCACACAGCAAAGCATCGAA 1503
|||||...||.|||||.|||||.|||||||||....|.||||||.|.|||
BL02538___mal 1454 AGGGCCCCAATCGGGGGTTCGGTCTTTATTTCGTCGAACAAAGCCTTGAA 1503
BSNT_04642___ 1504 AATTTAAAAGGCCAAATGATCCTCACAAGCGAAAAGAATGAAGGAACGAC 1553
||||||||.||.||.||..||.|.||.|||||||||||||||||||||||
BL02538___mal 1504 AATTTAAATGGACATATCGTCGTGACGAGCGAAAAGAATGAAGGAACGAC 1553
BSNT_04642___ 1554 ATTCAGTATTCGCATCCCGTACGAACCGAAGGAGGAAAATCATGATTAA 1602
|||||||.|.|||||.|||||.|||||.||||||||..|.|||||||.|
BL02538___mal 1554 ATTCAGTCTCCGCATTCCGTATGAACCAAAGGAGGATGACCATGATTGA 1602
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