Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04640 and BL02537
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:47
# Commandline: needle
# -asequence dna-align/BSNT_04640___yuxK.1.5803.seq
# -bsequence dna-align/BL02537___yuxK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04640___yuxK-BL02537___yuxK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04640___yuxK-BL02537___yuxK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04640___yuxK
# 2: BL02537___yuxK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 441
# Identity: 277/441 (62.8%)
# Similarity: 277/441 (62.8%)
# Gaps: 60/441 (13.6%)
# Score: 777.5
#
#
#=======================================
BSNT_04640___ 1 GTGACTTCAGAACAAATTCCAAATCG---CGTTTTGCTGTTTGACGGTGT 47
||| |...|.||.||..|||| |||| |||||||||||.||
BL02537___yux 1 GTG------GCGGATATGCCCGATCGAATCGTT---CTGTTTGACGGCGT 41
BSNT_04640___ 48 CTGCAATCTATGCAATGGCGCCGTGCAATTTATCATTAAACGTGATCCGG 97
.|||||..|.|||.|.||.|||||||||||.||.||.||||.||||||.|
BL02537___yux 42 GTGCAACTTTTGCGACGGAGCCGTGCAATTCATTATCAAACATGATCCTG 91
BSNT_04640___ 98 ACGGATTGATTTCTTTCACATCGCTGCAGTCGGAAACAGGGCAGAGCCTG 147
|.||.||..||||.|||.|.||.|||||.||.||..|.||...||..|||
BL02537___yux 92 AAGGCTTATTTTCATTCGCTTCCCTGCAATCTGACGCCGGAGGGAATCTG 141
BSNT_04640___ 148 CTGAA-AAAAAGCGGGCTCCCGACTGATCGGTTTGACAGCTTTGTCTTTA 196
||.|| .||.|.| ..|||||..|.||||..|||.||||||||.|.||.|
BL02537___yux 142 CTCAAGCAATATC-ACCTCCCTTCCGATCATTTTAACAGCTTTATTTTGA 190
BSNT_04640___ 197 TTGAAGACGGCCAAGTGCA-CACAAAGTCAACTGCAGCCATTAAGGT--T 243
|.|||.||||||..||..| || |||||||||.||.|||.|..|.|| |
BL02537___yux 191 TCGAAAACGGCCGGGTATATCA-AAAGTCAACGGCCGCCTTGCACGTGGT 239
BSNT_04640___ 244 TTCAGGCATCTGCGAGGCCCATGGCGG--CTCTT-CGTCCTGTTTTTCGC 290
...|.|| ||.|..||||..|||||| |.||| ||.|||.||..| |
BL02537___yux 240 GAAAAGC--CTCCCGGGCCTTTGGCGGGCCGCTTCCGCCCTCTTGAT--C 285
BSNT_04640___ 291 AGTACC------------GAAGCCTGTCAGAGATATGGTCTATTCTTTCA 328
|.|.|| ||.||| |||||...|.|||
BL02537___yux 286 ATTCCCCGGCCGCTTCGGGACGCC-------------GTCTACAGTGTCA 322
BSNT_04640___ 329 TTGCCAAAAACCGCTATAAGTGGTTTGGCAAAAAAAATGAATGTATGCTC 378
||||.|||||||||||.||.|||||.||..||||||..||.||.|
BL02537___yux 323 TTGCGAAAAACCGCTACAAATGGTTCGGGCAAAAAAGCGAGTGCA----- 367
BSNT_04640___ 379 CCCTCCCC--TTCT---ATTAAAAAAAGATTTTTACCGTAA 414
||.|.||| |.|| ||.|.||||.||||||||.|.|||
BL02537___yux 368 CCGTTCCCGGTCCTGAGATCAGAAAACGATTTTTATCATAA 408
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