Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04498 and BL02528
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:41
# Commandline: needle
# -asequence dna-align/BSNT_04498___ytaB.1.5803.seq
# -bsequence dna-align/BL02528___ytaB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04498___ytaB-BL02528___ytaB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04498___ytaB-BL02528___ytaB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04498___ytaB
# 2: BL02528___ytaB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 517
# Identity: 312/517 (60.3%)
# Similarity: 312/517 (60.3%)
# Gaps: 89/517 (17.2%)
# Score: 820.0
#
#
#=======================================
BSNT_04498___ 1 --------ATGAAAAAGATTGTCGGC-GCTTTAGCCGTTTTTGTAATTAC 41
|.||||||.|.|..|||| |...|| ||.|||.|..|||.
BL02528___yta 1 TTGAAGAAAGGAAAAATAGTAACGGCTGTGATA---GTGTTTCTCGTTAT 47
BSNT_04498___ 42 ATATGCGCTGTTTTCAGCCGCAGG----CTACCTGTTTCCTGTGGACCAA 87
||||||.|||||||||..|||||| .|| |||||.||.||||..
BL02528___yta 48 ATATGCACTGTTTTCACTCGCAGGAATTTTA----TTTCCCGTAGACCGG 93
BSNT_04498___ 88 GAATGGTACAATTCATTGAAAAAACCGGACTGGACGCCAAGCGTAACTGC 137
||||||||..|.|||||.||.||.|||||.||||||| |||.| .||
BL02528___yta 94 GAATGGTATGAGTCATTAAACAAGCCGGATTGGACGC----CGTCA-GGC 138
BSNT_04498___ 138 -----GATCGGCATCATTTGGGCCACCCTGTTTGCCCTGATCTCCCTTTC 182
||||||.|.|.|.|||..|...|||||.|||.|.||.||..|..|
BL02528___yta 139 CGTTTGATCGGAACCGTCTGGAGCGTGCTGTTCGCCTTCATTTCATTAGC 188
BSNT_04498___ 183 AGCAGCCATTGTATATGCTGCGT-TTTCATTTAAAGGTGCGAAAAGC--- 228
|||.||..|.||.||||||||.| |..|| ||.|||||||
BL02528___yta 189 AGCGGCGCTCGTGTATGCTGCATATGACA--------TGAGAAAAGCAGC 230
BSNT_04498___ 229 -------TTTCGGTTTACACTTTTGATAAATTACGTGCTCAATCAAGCCT 271
|||.||.|.|..||..|.||.||.||.|||.|.||.||.||.|
BL02528___yta 231 TGCGCCATTTTGGATCATGCTGATCATCAACTATGTGTTTAACCAGGCAT 280
BSNT_04498___ 272 TCAGCTATTTCCAGTTTACGCAAAAAAATCTGCTGGCTGCATCGC--TTG 319
||||||||||.||.||||||||||||||..|.||.||||| ||| |.|
BL02528___yta 281 TCAGCTATTTTCAATTTACGCAAAAAAACTTACTTGCTGC--CGCAGTCG 328
BSNT_04498___ 320 ACTGCCTGCTT-GTCGCCATCACAGCAATCGTATTACTGATCATTGCCAA 368
||| |||..|| ||.|||||.||.|| || |.|..||.|.|.||..||.
BL02528___yta 329 ACT-CCTTTTTCGTAGCCATTACCGC--TC-TTTCGCTCACCTTTATCAC 374
BSNT_04498___ 369 A----AAATACAACAGAGCCGCAAGCTATCTTCTTT-TGCCTTATTATTT 413
| .|||.| |||.|.|.|| .||.||..||||| |.||||||....|
BL02528___yta 375 ACGGCGAATTC-ACAAAACGGC-GGCCATTCTCTTTATCCCTTATGTGCT 422
BSNT_04498___ 414 ATGGAGTGCATTTGCGACGTTCTTAT----CCTTTACAATCAATTCA--- 456
.||||||...||.||| .||||| |.|||| |.|||.|
BL02528___yta 423 GTGGAGTTTTTTCGCG----GCTTATCTCGCGTTTA----CGATTTACGG 464
BSNT_04498___ 457 -ATGAATCTGTGA---- 468
||||||| |
BL02528___yta 465 GATGAATC----ATTAG 477
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