Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04600 and BL02523
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:45
# Commandline: needle
# -asequence dna-align/BSNT_04600___tgl.1.5803.seq
# -bsequence dna-align/BL02523___tgl.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04600___tgl-BL02523___tgl.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04600___tgl-BL02523___tgl.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04600___tgl
# 2: BL02523___tgl
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 810
# Identity: 506/810 (62.5%)
# Similarity: 506/810 (62.5%)
# Gaps: 144/810 (17.8%)
# Score: 1522.5
#
#
#=======================================
BSNT_04600___ 1 ATGATTATTGTATCAGGACAATTGCTCCGTCCCCAGGATATTGAAA---- 46
|||||.|.|||.||.||..|...|||||||||..|||||||.||||
BL02523___tgl 1 ATGATAAGTGTTTCGGGCTACCGGCTCCGTCCTGAGGATATCGAAAAACT 50
BSNT_04600___ 47 -ATTGGCAGATTGATCA-----------AAATCTGAATCCGCTGTTAAAA 84
|.||.||| ||| |.|||..||.|||
BL02523___tgl 51 GAATGTCAG-----TCAGACGCAGAGAGACATCGCAAACCG--------- 86
BSNT_04600___ 85 GAGATGATTGAGACGCCTGTTCAGTTTGAT---TATCATTCAATTGCTGA 131
||||.|.|..|.||| ||.|.|.| || ||...||||||..|.||
BL02523___tgl 87 --GATGCTGGCCATGCC-GTCCGGAT--ATAGATACGGTTCAATCTCAGA 131
BSNT_04600___ 132 ACTGATGTTTGAGCTTAAACTGCGGATGA--ATATTGTAGCAGCGG-CAA 178
||||.|.||||||||.|.| |.|.|| || |||..||...|.||| ||.
BL02523___tgl 132 ACTGTTATTTGAGCTGAGA-TTCAGA-GAGCATACCGTCAAATCGGCCAG 179
BSNT_04600___ 179 AGACGCTGCACAAAAGCGGGGCGAAGTTTGCCACTTTTTTAAAAACATAC 228
||| ||||..|||.|||||.||||||||||||||.||||.|||.||||||
BL02523___tgl 180 AGA-GCTGATCAACAGCGGAGCGAAGTTTGCCACCTTTTCAAAGACATAC 228
BSNT_04600___ 229 GGGAATACAACGTATTGGAGGGTTTCACCGGAGGGCGCCTTGGAGCTGAA 278
||||||..|..||.|||||||||..|.||.|||||.||.||||||.||||
BL02523___tgl 229 GGGAATGAAGAGTTTTGGAGGGTGACGCCTGAGGGGGCTTTGGAGTTGAA 278
BSNT_04600___ 279 ATACAGAATGCCGCCTTCAAAAGCGATTCGGGACATTGCAGAGAACGGCC 328
.|||||....|||.|||||||.||||||||..|.|||...||.|.|||||
BL02523___tgl 279 GTACAGGGCACCGGCTTCAAAGGCGATTCGAAATATTTTTGAAAGCGGCC 328
BSNT_04600___ 329 CGTTTTATGCGTTTGAATGCGCAACCGCAATCGTTATCATTTATTACTTG 378
|.|.||||||.|||||.|||||.||.||.||.||.|||||||.|||..||
BL02523___tgl 329 CTTCTTATGCTTTTGAGTGCGCGACTGCGATTGTCATCATTTTTTATATG 378
BSNT_04600___ 379 GC-CTTAATCGATACAATCGGTGAAGATAAATTCAATGCCAG--CTTTGA 425
|| ||| .||.|.||.|||||.|| |||| .|||||
BL02523___tgl 379 GCGCTT-CTCAAAACGATCGGCGA--------------CCAGACATTTGA 413
BSNT_04600___ 426 C------------AGAATTATTTTATATGACTGGCATTATGAGAAATTGC 463
| ||.||.||||||||.||.|||||.||||||....|||
BL02523___tgl 414 CCGGAATTATCAAAGGATCATTTTATACGATTGGCACTATGAGCGGCTGC 463
BSNT_04600___ 464 CGATCTATACGGAAACAGGACACCACTTTTTCCTT---GGAGATTGTTTG 510
|||||||||||||.|.||||.||.|| |.|||| |||||.||..||
BL02523___tgl 464 CGATCTATACGGATAAAGGAAACGAC---TACCTTCCGGGAGACTGCCTG 510
BSNT_04600___ 511 TATTTTAAGAATCCTGAATTTGATCCGCAAAAG-GCGCAATGGAGAGGCG 559
|||||.|||||.||||||||.||||| |..||| .||||.|||.|.||.|
BL02523___tgl 511 TATTTCAAGAACCCTGAATTCGATCC-CTCAAGACCGCAGTGGCGCGGAG 559
BSNT_04600___ 560 AAAATGTGATTTTACTGGGGGAAGATAA---ATATTTTGCCCATGGTCTT 606
||||||..|||||||| .|||.|||| .|||...||.||.||.||.
BL02523___tgl 560 AAAATGCTATTTTACT---TGAAAATAATCTCTATGCGGCACACGGCCTG 606
BSNT_04600___ 607 GGAATCTTAAACG--GAAAGCAAATTATAGATAAGCTGAA--TTCTTTTA 652
||.|||||||.|| |||| .|||.||.||.||.||||| ..||
BL02523___tgl 607 GGGATCTTAAGCGGCGAAA--CAATCATTGAAAAACTGAACGGGCT---- 650
BSNT_04600___ 653 GGAAAAAAGGAGCCT----TACA---GTCAGCCTACCTTCTGTCTCAGGC 695
||.|| ||||| .||| |||.|||||.||.||.||.||.|.
BL02523___tgl 651 -GAGAA----AGCCTCATGCACAGACGTCCGCCTATCTGCTTTCCCAAGT 695
BSNT_04600___ 696 GACCAGACTGGATGTTCCGTCTCTTTTCCGCATCGTCCGCTAA------- 738
|||..|..|.|||.||||| |||| |||
BL02523___tgl 696 GACGCGGGTTGATATTCCG----------GCAT-------TAATTCAAAT 728
BSNT_04600___ 738 ---------- 738
BL02523___tgl 729 GATCAGATAG 738
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