Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04583 and BL02522
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:44
# Commandline: needle
# -asequence dna-align/BSNT_04583___yulF.1.5803.seq
# -bsequence dna-align/BL02522___yulF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04583___yulF-BL02522___yulF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04583___yulF-BL02522___yulF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04583___yulF
# 2: BL02522___yulF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1048
# Identity: 689/1048 (65.7%)
# Similarity: 689/1048 (65.7%)
# Gaps: 122/1048 (11.6%)
# Score: 2068.0
#
#
#=======================================
BSNT_04583___ 1 GTGATACGTTTTGCAATAATAGGAACCAACTGGATTACAGACCGCTTTCT 50
.||||.||.||.|...||.|.|||||.||.||||||||.|||||.|||||
BL02522___yul 1 ATGATGCGGTTCGGGGTAGTCGGAACAAATTGGATTACCGACCGGTTTCT 50
BSNT_04583___ 51 TGAGTCAGCAGCGGAT--ATCGAAGATTTTCAGCTGACTGCTGTTTATTC 98
||.|.|.|| |.|.| ||||||||||||||..|.||.||.||.|||||
BL02522___yul 51 TGGGGCGGC--CCGTTTGATCGAAGATTTTCAATTAACCGCGGTATATTC 98
BSNT_04583___ 99 AA-GATCGGCTGAACGCGCTGGCGAGTTTGCTGC-TAAACACAACGCTGC 146
|| ||.||| .||.||||...|.||.||.|| || .||| .|||..||
BL02522___yul 99 AAGGACCGG-AGAGCGCGGACGTGAATTCGC-GCAGAAA---TACGGAGC 143
BSNT_04583___ 147 GCATGC--CTTCTCAGACC---TTCAG-GAAATGGCGGCGAGCGATTGCT 190
..|.|| .||.| ||| .||.| ||||||||.|.|||||| ||.|
BL02522___yul 144 CGAGGCGGTTTTT---ACCGATATCGGAGAAATGGCTGAGAGCGA-TGTT 189
BSNT_04583___ 191 -TTGATGCCGTATACATAGCGAGCCCGAACGCTCTTCACAAGGAACAAGC 239
|||||||.|||||.||.||.||.||.|||.||.|.||.||.||.||.||
BL02522___yul 190 ATTGATGCGGTATATATCGCAAGTCCCAACTCTTTACATAAAGATCAGGC 239
BSNT_04583___ 240 CGTTCTCTTTATGAACCATGGCAAGCATGTGCTTTGTGAGAAGCCGTTTG 289
.|||...||.|||||....||.||.||.||.||.||.||.||.|||.|||
BL02522___yul 240 AGTTACATTCATGAAAAGCGGAAAACACGTCCTGTGCGAAAAACCGCTTG 289
BSNT_04583___ 290 CTTCGAATACAAAAGAAACAGAAGAGATGATCTCAGCGGCTAAGGCAAAC 339
|.||..||...||||||.|.|||||.|||.|...|.|.||..|||.|.||
BL02522___yul 290 CGTCCCATGTCAAAGAAGCGGAAGAAATGGTAAAAACAGCGCAGGAACAC 339
BSNT_04583___ 340 GGCGT----TGTTCTCATGGAAGCAATGAAGACCACTTTCCTGCCGAATT 385
.|||| | |.||||||||.|||||.||.||.||.||.|||||||
BL02522___yul 340 CGCGTAACAT----TTATGGAAGCGATGAAAACGACGTTTCTTCCGAATT 385
BSNT_04583___ 386 TCAAAGAGCTGAAAAAAC-------ACCTGCATAAAATCGGCACTGTCCG 428
|.|| |||.|.| |||||||.||||||||||..|||||
BL02522___yul 386 TTAA-------AAACATCAGTCGCAACCTGCACAAAATCGGCAAAGTCCG 428
BSNT_04583___ 429 CAGATTTACCGCAAGCTACTGCCAGTATTCCTCACGATATGACGCGT-TC 477
|.|.|||||.||.|||||||||||.||.||.||.||.||||||||.| ||
BL02522___yul 429 CCGTTTTACAGCCAGCTACTGCCAATACTCTTCCCGCTATGACGCCTATC 478
BSNT_04583___ 478 AGAAGCGGAACTGTTTTGAATGCGTTTCAGCCTGAGCTT--TCCAATGGG 525
|||.||||||.||.||.||.||.|||.|.|| .|||| ||.||.||.
BL02522___yul 479 -GAAACGGAACCGTCTTAAACGCATTTAATCC--GGCTTTATCGAACGGT 525
BSNT_04583___ 526 TCATTAATGGATATTGGCGTCTATTGTATTTATCCGGCTGTTGTGTTGTT 575
||.||.||||||||.|||||||||||..||.||||.||..|.||..||||
BL02522___yul 526 TCCTTGATGGATATCGGCGTCTATTGCGTTCATCCCGCGATCGTCCTGTT 575
BSNT_04583___ 576 TGG----CGCGCCGAAGGATGTAAAAGCAAACGGATATGCTTTATCC--- 618
.|| |.|..|||| ||.|||||.||||| || |.||||
BL02522___yul 576 CGGCAAACCCCTCGAA----GTCAAAGCGAACGG----GC-TGATCCTTG 616
BSNT_04583___ 619 --TCCGGAGTGGACGGAGAAGGAACTGTCATTCTGTCT----TACGACGG 662
||.||.|.||||||.||||||||.| |.|||| | |||.|.|.
BL02522___yul 617 AGTCAGGGGCGGACGGTGAAGGAACAG---TGCTGT-TAAAATACAAGGA 662
BSNT_04583___ 663 GTTCGAAGCTGTTCTGATGCATTCCAAAATCTCTACTTCCT--ATGCCCC 710
|..||||||.||.||||||||.||.||||||||.|.||||| || |||
BL02522___yul 663 GCACGAAGCCGTACTGATGCACTCGAAAATCTCAAATTCCTTCAT--CCC 710
BSNT_04583___ 711 GGCTGAAATCCAGGGTGAAGACGGGACGATTGTAATCGATACGATTCACC 760
|||||||||.||.||.|||||.||..|.||.||.|||||||..||.||||
BL02522___yul 711 GGCTGAAATTCAAGGAGAAGAAGGCTCTATCGTCATCGATAAAATCCACC 760
BSNT_04583___ 761 GGCCTGAACGTGTTGAAATCCGCTACCGGGACGGCCGCCTTGAAAACATC 810
|.||.||||..||.||.||||||||.||||||||.||..||| ||||||
BL02522___yul 761 GCCCCGAACAAGTCGACATCCGCTATCGGGACGGTCGGGTTG--AACATC 808
BSNT_04583___ 811 --GCGATCCCTGATCCTAAACCAGCGATGTTCTATGAAGCAGAAGAATTT 858
.||.|.||||||...|||||.||.|||||.||||||.||||.|||||.
BL02522___yul 809 TTACGCTGCCTGATGACAAACCGGCCATGTTTTATGAAACAGAGGAATTC 858
BSNT_04583___ 859 GTCACGCTCATAAAAGA------GAATAAGCTGGAATCTGAAGAAAATAC 902
.|||...|.||.|||.| || |.||.|||......||.||
BL02522___yul 859 ATCAATTTAATTAAACAAGGGCGGA------TCGAGTCTTCGCTTAACAC 902
BSNT_04583___ 903 ATTTGAACGGTCT-TTGACCACCGCAAAGATT-------ATGGAAGAAGC 944
.||||||||.||| |.||| |.||| ||.||.|||||
BL02522___yul 903 GTTTGAACGTTCTATAGAC--------ACATTGGCGGTCATAGATGAAGC 944
BSNT_04583___ 945 AAGAAAGCAAATGGGGATTGTATACCCTGCTGATCA-----AGCTTAA 987
..|.||.||.||.||..|.||.|.|||.|||||||| ||
BL02522___yul 945 GCGCAAACAGATCGGTCTCGTTTTCCCCGCTGATCACATGTAG----- 987
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