Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00470 and BL02514

See Amino acid alignment / Visit BSNT_00470 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:06
# Commandline: needle
#    -asequence dna-align/BSNT_00470___pcp.1.5803.seq
#    -bsequence dna-align/BL02514___pcp.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00470___pcp-BL02514___pcp.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00470___pcp-BL02514___pcp.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00470___pcp
# 2: BL02514___pcp
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 685
# Identity:     452/685 (66.0%)
# Similarity:   452/685 (66.0%)
# Gaps:          74/685 (10.8%)
# Score: 1340.0
# 
#
#=======================================

BSNT_00470___      1 ATGAGAAAAAAAGTGCTGATCACTGGCTTTGACCCTTTTGACAAAGAAAC     50
                     |||.||||.|||||.|||.|.||.||.||||||||.||||....||||||
BL02514___pcp      1 ATGGGAAAGAAAGTACTGCTGACAGGATTTGACCCCTTTGGGGGAGAAAC     50

BSNT_00470___     51 CGTCAATCCATCATGGGAAGCGGCGAAACGGCTTAATGGCTTCGAGACGG    100
                     .||||||||.||.||||||||.|..||||||||.||.|     |||| ||
BL02514___pcp     51 AGTCAATCCGTCCTGGGAAGCTGTAAAACGGCTGAACG-----GAGA-GG     94

BSNT_00470___    101 A---AGAAGCCAT---AATTACAGCGGAACAAATTCCTACTGTCTTTAGA    144
                     |   |||||.|.|   .||..|||||||.||.|||||.||.|| |||..|
BL02514___pcp     95 AAGCAGAAGGCGTCTCTATCGCAGCGGAGCAGATTCCGACCGT-TTTTCA    143

BSNT_00470___    145 TCCGCTCTGGACACTCTGCGCC-----------AAGCCATTCAAAAACAT    183
                     |          ||.||.|||.|           ||||.||..||||.||.
BL02514___pcp    144 T----------CATTCAGCGGCCGTTTTGAAAAAAGCGATCGAAAAGCAC    183

BSNT_00470___    184 CAGCCGGATATCGTAATTTGTGTCGGCCAAGCAGGAGG-ACGGATGCAGA    232
                     .|.||.|||.||||.|||||.|..||.||||||||.|| |.||.| ||.|
BL02514___pcp    184 AAACCCGATGTCGTCATTTGCGCAGGGCAAGCAGGCGGCAGGGCT-CATA    232

BSNT_00470___    233 TTACACCGGAACGAGTGGCGATCAACCTTGCAGATGCGCGAATCCCCGAT    282
                     ||||.||||||||..|.||.||||||.|.|..|||||.||.||.||.|||
BL02514___pcp    233 TTACGCCGGAACGCATCGCAATCAACATCGATGATGCTCGCATTCCGGAT    282

BSNT_00470___    283 AACGAAGGACATCAGCCGATTGATGAAGAAATTTCTCCAGATGGGCCCGC    332
                     ||.||||..|...|.|||||.||||||...||..|..||||.|||||.||
BL02514___pcp    283 AATGAAGACCGGGAACCGATCGATGAACCCATCGCGGCAGACGGGCCTGC    332

BSNT_00470___    333 CGCTTACTGGACAGGGCTTCCCGTGAAACGAA---TGACTGCTAAGA--T    377
                     .|||||||||.|.|.||||||..|.||.|..|   |||     ||||  |
BL02514___pcp    333 TGCTTACTGGTCCGCGCTTCCGATCAAGCTCATTGTGA-----AAGAGTT    377

BSNT_00470___    378 GAAGGAACACGGCATTCCAGCTGCGGTTTCCTACACAGCGGGAACCTTTG    427
                     ||...||.||||.||.||.||..|.||.|||.|..||||||||||.||.|
BL02514___pcp    378 GAGAAAAAACGGAATACCGGCCTCCGTCTCCAATTCAGCGGGAACTTTCG    427

BSNT_00470___    428 TATGCAACTATTTGTTCTACGGGTTAATGGA--TTACATTAG-CCGGACA    474
                     ||||||||.||.|.||.|||..|||||||.|  .||   ||| |||.||.
BL02514___pcp    428 TATGCAACCATCTCTTTTACCAGTTAATGCACCGTA---TAGACCGCACC    474

BSNT_00470___    475 TCCCCGCACATTCGCGGCGGTTTTATTCATATTCC-TTACATTCCGC-AG    522
                     ||..|..||||.|||||.||.||.||.||.||||| ||.|  |||.| |.
BL02514___pcp    475 TCGGCAAACATCCGCGGAGGGTTCATCCACATTCCGTTTC--TCCCCGAA    522

BSNT_00470___    523 CAAACAATCGACAAAACAGCGCCGAGCCTCAGTCTGGACACGATTGTCCG    572
                     |||||||||||.|||.|.|.||||||.|||||.||.||.|||||.|||..
BL02514___pcp    523 CAAACAATCGATAAACCCGAGCCGAGTCTCAGCCTTGAAACGATCGTCGA    572

BSNT_00470___    573 GGCATTGAGAATCGCCGCTGT----TACGGCC-GCAC-AATATGATGAGG    616
                     .|.|.|.|||||.||.||.||    |.||.|| |||| ||.|.|||    
BL02514___pcp    573 AGGACTTAGAATAGCTGCGGTCATCTCCGCCCTGCACGAAAAAGAT----    618

BSNT_00470___    617 AT--GTGAAGTCACCGGGCGGTACGCTGCA-CTAA    648
                     ||  |.||    |.|||||||..||.| || ||.|
BL02514___pcp    619 ATTCGCGA----AACGGGCGGATCGAT-CAGCTGA    648


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