Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00470 and BL02514
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:06
# Commandline: needle
# -asequence dna-align/BSNT_00470___pcp.1.5803.seq
# -bsequence dna-align/BL02514___pcp.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00470___pcp-BL02514___pcp.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00470___pcp-BL02514___pcp.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00470___pcp
# 2: BL02514___pcp
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 685
# Identity: 452/685 (66.0%)
# Similarity: 452/685 (66.0%)
# Gaps: 74/685 (10.8%)
# Score: 1340.0
#
#
#=======================================
BSNT_00470___ 1 ATGAGAAAAAAAGTGCTGATCACTGGCTTTGACCCTTTTGACAAAGAAAC 50
|||.||||.|||||.|||.|.||.||.||||||||.||||....||||||
BL02514___pcp 1 ATGGGAAAGAAAGTACTGCTGACAGGATTTGACCCCTTTGGGGGAGAAAC 50
BSNT_00470___ 51 CGTCAATCCATCATGGGAAGCGGCGAAACGGCTTAATGGCTTCGAGACGG 100
.||||||||.||.||||||||.|..||||||||.||.| |||| ||
BL02514___pcp 51 AGTCAATCCGTCCTGGGAAGCTGTAAAACGGCTGAACG-----GAGA-GG 94
BSNT_00470___ 101 A---AGAAGCCAT---AATTACAGCGGAACAAATTCCTACTGTCTTTAGA 144
| |||||.|.| .||..|||||||.||.|||||.||.|| |||..|
BL02514___pcp 95 AAGCAGAAGGCGTCTCTATCGCAGCGGAGCAGATTCCGACCGT-TTTTCA 143
BSNT_00470___ 145 TCCGCTCTGGACACTCTGCGCC-----------AAGCCATTCAAAAACAT 183
| ||.||.|||.| ||||.||..||||.||.
BL02514___pcp 144 T----------CATTCAGCGGCCGTTTTGAAAAAAGCGATCGAAAAGCAC 183
BSNT_00470___ 184 CAGCCGGATATCGTAATTTGTGTCGGCCAAGCAGGAGG-ACGGATGCAGA 232
.|.||.|||.||||.|||||.|..||.||||||||.|| |.||.| ||.|
BL02514___pcp 184 AAACCCGATGTCGTCATTTGCGCAGGGCAAGCAGGCGGCAGGGCT-CATA 232
BSNT_00470___ 233 TTACACCGGAACGAGTGGCGATCAACCTTGCAGATGCGCGAATCCCCGAT 282
||||.||||||||..|.||.||||||.|.|..|||||.||.||.||.|||
BL02514___pcp 233 TTACGCCGGAACGCATCGCAATCAACATCGATGATGCTCGCATTCCGGAT 282
BSNT_00470___ 283 AACGAAGGACATCAGCCGATTGATGAAGAAATTTCTCCAGATGGGCCCGC 332
||.||||..|...|.|||||.||||||...||..|..||||.|||||.||
BL02514___pcp 283 AATGAAGACCGGGAACCGATCGATGAACCCATCGCGGCAGACGGGCCTGC 332
BSNT_00470___ 333 CGCTTACTGGACAGGGCTTCCCGTGAAACGAA---TGACTGCTAAGA--T 377
.|||||||||.|.|.||||||..|.||.|..| ||| |||| |
BL02514___pcp 333 TGCTTACTGGTCCGCGCTTCCGATCAAGCTCATTGTGA-----AAGAGTT 377
BSNT_00470___ 378 GAAGGAACACGGCATTCCAGCTGCGGTTTCCTACACAGCGGGAACCTTTG 427
||...||.||||.||.||.||..|.||.|||.|..||||||||||.||.|
BL02514___pcp 378 GAGAAAAAACGGAATACCGGCCTCCGTCTCCAATTCAGCGGGAACTTTCG 427
BSNT_00470___ 428 TATGCAACTATTTGTTCTACGGGTTAATGGA--TTACATTAG-CCGGACA 474
||||||||.||.|.||.|||..|||||||.| .|| ||| |||.||.
BL02514___pcp 428 TATGCAACCATCTCTTTTACCAGTTAATGCACCGTA---TAGACCGCACC 474
BSNT_00470___ 475 TCCCCGCACATTCGCGGCGGTTTTATTCATATTCC-TTACATTCCGC-AG 522
||..|..||||.|||||.||.||.||.||.||||| ||.| |||.| |.
BL02514___pcp 475 TCGGCAAACATCCGCGGAGGGTTCATCCACATTCCGTTTC--TCCCCGAA 522
BSNT_00470___ 523 CAAACAATCGACAAAACAGCGCCGAGCCTCAGTCTGGACACGATTGTCCG 572
|||||||||||.|||.|.|.||||||.|||||.||.||.|||||.|||..
BL02514___pcp 523 CAAACAATCGATAAACCCGAGCCGAGTCTCAGCCTTGAAACGATCGTCGA 572
BSNT_00470___ 573 GGCATTGAGAATCGCCGCTGT----TACGGCC-GCAC-AATATGATGAGG 616
.|.|.|.|||||.||.||.|| |.||.|| |||| ||.|.|||
BL02514___pcp 573 AGGACTTAGAATAGCTGCGGTCATCTCCGCCCTGCACGAAAAAGAT---- 618
BSNT_00470___ 617 AT--GTGAAGTCACCGGGCGGTACGCTGCA-CTAA 648
|| |.|| |.|||||||..||.| || ||.|
BL02514___pcp 619 ATTCGCGA----AACGGGCGGATCGAT-CAGCTGA 648
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