Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04557 and BL02511
See
Amino acid alignment /
Visit
BSNT_04557 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:42
# Commandline: needle
# -asequence dna-align/BSNT_04557___yuaJ.1.5803.seq
# -bsequence dna-align/BL02511___yuaJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04557___yuaJ-BL02511___yuaJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04557___yuaJ-BL02511___yuaJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04557___yuaJ
# 2: BL02511___yuaJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 616
# Identity: 404/616 (65.6%)
# Similarity: 404/616 (65.6%)
# Gaps: 68/616 (11.0%)
# Score: 1201.0
#
#
#=======================================
BSNT_04557___ 1 ATGAATCAATCTAAGCAACTGGTTCGCCTTATTGAAATTGCCATTATGAC 50
||||||||||||||.|||||.||.|..||.|||||||||||.||||||||
BL02511___yua 1 ATGAATCAATCTAAACAACTTGTACAGCTGATTGAAATTGCGATTATGAC 50
BSNT_04557___ 51 AGCGGCAGCCGTTATTTTAGACATTGTCTCAGGAATGTTTCTTAGCATGC 100
||....|||..||||..|.||.||.||.||.|||||||||.|.|..||||
BL02511___yua 51 AGGAATAGCACTTATACTTGATATGGTGTCCGGAATGTTTTTAAAAATGC 100
BSNT_04557___ 101 CTCAAGGAGGCTCGGTCTCCATCATGATGATTCCGATCTTTTTAATTTCG 150
|||||||.||.||..||.||.|||||||||||||||||||..|.||.||.
BL02511___yua 101 CTCAAGGCGGTTCAATCGCCGTCATGATGATTCCGATCTTCCTGATCTCC 150
BSNT_04557___ 151 TTTCGCTGGGGTGTCAAAGCAGGTCTTACTACAGGTTTGTTGACAGGTCT 200
|||.|.|||||..||||.|||||.||..|.||.||.||.||..|.||..|
BL02511___yua 151 TTTAGATGGGGGCTCAAGGCAGGGCTGGCGACCGGGTTTTTAGCCGGATT 200
BSNT_04557___ 201 AGTACAAATAG-CAATCGGA-------AACTTGTTTGCTCAACATCCTGT 242
..|.|||.|.| ||.| ||| |..||||| ||||||.|
BL02511___yua 201 GCTTCAATTTGTCACT-GGAGGATTTTACGTTGTT-------CATCCTCT 242
BSNT_04557___ 243 ACAGC-TATTGTTAGATTACATTGTCG------CTTTCGCAGCAATCGGC 285
.|||| |.||.|| ||||||.||.||| |...|||.|.|||||
BL02511___yua 243 GCAGCTTCTTCTT-GATTACTTTATCGCGCCTACGGCCGCGGGAATCG-- 289
BSNT_04557___ 286 ATAAGCGGCTGTTTCGCTTCTTCTGTCCGTAAAGCCGCTGTATCAAAAAC 335
||||||.|||.||....||..||||.||.||..| .|.|.|.||||
BL02511___yua 290 ----GCGGCTTTTTTGCCGGATCGATCCGAAATGCTTC-ATTTGAGAAAC 334
BSNT_04557___ 336 AAAAGGGAAATTGATTGTTTC--AGTGGTCAGC--GCAGTTTTTATCGGC 381
||||.||||| |||..|||| | ||.|..|| ||.||..||.|.||.
BL02511___yua 335 AAAAAGGAAA--GATCATTTCCTA-TGTTATGCTGGCCGTCCTTCTTGGA 381
BSNT_04557___ 382 AG----------TTTGCTGCGCTATGCCGCGCATGTCATTTCA--GGAGC 419
|| ||| || |||.||||||| ||| ||.||
BL02511___yua 382 AGCGGACTGAAATTT------CT----CGCACATGTCA--TCAGCGGCGC 419
BSNT_04557___ 420 TGTGTTTTTCGGCAGCTTTGCTCCAAAAGGAACACCGGTATGGATTTATT 469
|||.|||||.||.|.||.|||.||.|||||.||.||||||||||||||||
BL02511___yua 420 TGTCTTTTTTGGAAACTATGCGCCTAAAGGCACTCCGGTATGGATTTATT 469
BSNT_04557___ 470 CTTTAACTTATAATGCGACTTACATGGTTCCTTCATTCATTATTTGTGCA 519
|.||....|||||||..||.||.|||.||||.||.||||||.|.||..||
BL02511___yua 470 CATTGGTATATAATGGAACGTATATGCTTCCGTCTTTCATTGTCTGCACA 519
BSNT_04557___ 520 ATTGTCCTATGTTTATTATTTATGACAGCACCCCGTCTGCT-TAAAAGTG 568
||.|||||.|||.||.|..|..|.||.|||||..|.||.|| .||||..|
BL02511___yua 520 ATCGTCCTTTGTATACTGCTGCTAACCGCACCAAGACTTCTAGAAAACAG 569
BSNT_04557___ 569 -ACAAA---GCG-TAA 579
||||| |.| |||
BL02511___yua 570 AACAAACATGAGATAA 585
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.