Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00061 and BL02510

See Amino acid alignment / Visit BSNT_00061 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:43
# Commandline: needle
#    -asequence dna-align/BSNT_00061___yaaQ.1.5803.seq
#    -bsequence dna-align/BL02510___yaaQ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00061___yaaQ-BL02510___yaaQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00061___yaaQ-BL02510___yaaQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00061___yaaQ
# 2: BL02510___yaaQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 332
# Identity:     258/332 (77.7%)
# Similarity:   258/332 (77.7%)
# Gaps:           4/332 ( 1.2%)
# Score: 989.0
# 
#
#=======================================

BSNT_00061___      1 ATGAAATTGATAGTGGCAGTTGTACAAGATCAGGACAGCAACAGACTTTT     50
                     |||||.||.||..|.||.|||||.|||||.||.|||||||||.|.|||||
BL02510___yaa      1 ATGAAGTTAATTATCGCTGTTGTTCAAGACCAAGACAGCAACCGGCTTTT     50

BSNT_00061___     51 GAAAACCTTAACGGATCACAACTTCAGAGTCACAAAGCTTGCGACGACAG    100
                     .||..|.||.||.||||||||.||..|.||.||.||.||.|||.||||.|
BL02510___yaa     51 AAAGGCTTTGACCGATCACAATTTTCGCGTGACCAAACTGGCGTCGACCG    100

BSNT_00061___    101 GAGGATTTCTTAAATCAGGCAATACAACGTTTATGATCGGTGTCGAGGAT    150
                     |.||.|||||.|||||.||.||.|||||.||.|||.|.|||||.||.|||
BL02510___yaa    101 GCGGCTTTCTGAAATCGGGAAACACAACCTTCATGTTGGGTGTAGATGAT    150

BSNT_00061___    151 ATACGCGTCAATAAAGCGTTGAGTCTCATTAAAGAAAACGG--GCAGAAA    198
                     ||.||.||..|.|||||.||.||..|.||.|||||||||||  ||  ||.
BL02510___yaa    151 ATTCGAGTAGACAAAGCTTTAAGCTTGATAAAAGAAAACGGAAGC--AAG    198

BSNT_00061___    199 CGTGATCAGATGATTGCCCCTGTATCTCCAATGGGCGGAAATGCTGATTC    248
                     ||.||||||.|||||||||||||.||||||||||||||||||||||||||
BL02510___yaa    199 CGGGATCAGCTGATTGCCCCTGTTTCTCCAATGGGCGGAAATGCTGATTC    248

BSNT_00061___    249 CTATGTCCCTTATCCAGTCGAAGTTGAAGTTGGCGGAGCGACAGTATTTG    298
                     .|||||.||||||||.||.||.||||||||.||||||||.||.||.||||
BL02510___yaa    249 ATATGTTCCTTATCCTGTTGAGGTTGAAGTGGGCGGAGCAACCGTTTTTG    298

BSNT_00061___    299 TCCTTCCAGTCGATGAATTTCATCAATTTTAA    330
                     |.||.||..||||..||||.||||||||||||
BL02510___yaa    299 TACTGCCGATCGAGCAATTCCATCAATTTTAA    330


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