Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00057 and BL02506
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:42
# Commandline: needle
# -asequence dna-align/BSNT_00057___xpaC.1.5803.seq
# -bsequence dna-align/BL02506___xpaC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00057___xpaC-BL02506___xpaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00057___xpaC-BL02506___xpaC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00057___xpaC
# 2: BL02506___xpaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 698
# Identity: 416/698 (59.6%)
# Similarity: 416/698 (59.6%)
# Gaps: 163/698 (23.4%)
# Score: 1145.5
#
#
#=======================================
BSNT_00057___ 1 ATG---CAGAGATTTTTTCACTTTTTGAT--GTGGAGTTTAACT------ 39
||| |.|| ||.||||.|||.|||| ||| .||||
BL02506___xpa 1 ATGAAACCGA---TTCTTCATTTTATGATTCGTG-----CAACTGCTGCA 42
BSNT_00057___ 40 AG--------CAGTGCGACTTTTGTTTTCATTGGAATATTGAGCTTTTTT 81
|| |.||||..||||.||||.|| |||||.||.
BL02506___xpa 43 AGTGCATTGTCCGTGCTCCTTTGGTTTACA-----------AGCTTCTTC 81
BSNT_00057___ 82 G-GTTTAAACCAGTCGCTTTTTTTATCTATTGTTTATGGGCTT--GCTTC 128
| |||| ||||||.| ||.|||..|| |..|..|||| ||..|
BL02506___xpa 82 GCGTTT-AACCAGAC-------TTTTCTGCTG-TCCTCCGCTTACGCAGC 122
BSNT_00057___ 129 TGGAGC------AGCCGTATATATAGCTGGCATCTGG--AATGCAAG-AC 169
.||||| .|||||.|||.| |||| || |||| | ||
BL02506___xpa 123 CGGAGCCTGGATTGCCGTTTATCT---TGGC----GGGAAATG---GTAC 162
BSNT_00057___ 170 GG-------TTATTTCTTAAAA-------AGCATGAATTGACAGGAAGAG 205
|| |||||| |||||| ||| |.|||.|..|.|
BL02506___xpa 163 GGAACCTATTTATTT-TTAAAAGAAAACCAGC------TTACAAGGCGGG 205
BSNT_00057___ 206 AGTATGCTTACATTAAGAAAAACTTAGA-------GGAAGCAAGGCAGAA 248
|.|||||.||.|| ||||| ||| ||||||.|.||.|||
BL02506___xpa 206 AATATGCCTATAT-----AAAAC--AGAATCTGCGGGAAGCTAAGCTGAA 248
BSNT_00057___ 249 AATGGTCCGTCTTAGGAAAA-CCTTGTTT-CAGGCTAAAAGCATTCAAAT 296
|||.|.||| .|||.||||| ||||.||| || |.|||||.||||||||.
BL02506___xpa 249 AATTGCCCG-GTTAAGAAAAGCCTTATTTGCA-GTTAAAAACATTCAAAC 296
BSNT_00057___ 297 GTTTAAGCAAAATGCAGAAATGCTAAGGATTGTGAGAAGGATTTATCTCC 346
..||||.||.|||..||||||.||..||||.||.||||..|||||...|.
BL02506___xpa 297 TATTAAACAGAATCTAGAAATTCTTCGGATCGTCAGAAAAATTTACAGCA 346
BSNT_00057___ 347 TCACCAAAAAAGAGCCAAAGCGGTTTTATCAGGCAGAACGATTTTTTTAT 396
||||.||.||.||.||||||||.||||||||||..|||||.||||.||||
BL02506___xpa 347 TCACAAAGAACGAACCAAAGCGTTTTTATCAGGTTGAACGCTTTTATTAT 396
BSNT_00057___ 397 CAAACTCTCGATTCGGTTGTTGAATTGACAGAGAAGTATGCTTTTCTATC 446
||||..||.|||||..||||||||.||||.||.|||.||||.|||.|..|
BL02506___xpa 397 CAAAGCCTTGATTCAATTGTTGAACTGACGGAAAAGCATGCGTTTTTGGC 446
BSNT_00057___ 447 ATCTCACCCAAA--AAAAAGCAAAGAACTGTCGA--TGTCGTTAAGTGAG 492
.||.||.||||| ..||.||.|| |.|.|| |.||.|||||.||.
BL02506___xpa 447 GTCACAGCCAAAGCGCAATGCGAA----TCTTGAAGTTTCTTTAAGCGAA 492
BSNT_00057___ 493 ACACGCATCACTCTTACTGAATTGA--------CCAAGCGTTTAGAGGAA 534
||.||.||.| || ||.|| ||||||..||.||.||.
BL02506___xpa 493 ACGCGTATGA-------TG-ATCGATAAGCTCGCCAAGCAATTGGAAGAC 534
BSNT_00057___ 535 GA--TTTA--ACTCAGGCAATGGATGATGAA-------TTTGACGAGTTG 573
|| |||| ||| ||.|||| .|||||.|.|||
BL02506___xpa 535 GACCTTTATGACT-----------TGCTGAAAACAGACATTGACCACTTG 573
BSNT_00057___ 574 CAGTTTGAATTAGACGCAGCAAAACATTCATTAAAGAAATAA------ 615
.||||||||.|.||||..||.||.||||| ||.||||.||
BL02506___xpa 574 GAGTTTGAACTGGACGTCGCGAAGCATTC---AATGAAAAAAAGCTGA 618
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