Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03692 and BL02505
See
Amino acid alignment /
Visit
BSNT_03692 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:42
# Commandline: needle
# -asequence dna-align/BSNT_03692___yqxL.1.5803.seq
# -bsequence dna-align/BL02505___yqxL.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03692___yqxL-BL02505___yqxL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03692___yqxL-BL02505___yqxL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03692___yqxL
# 2: BL02505___yqxL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1061
# Identity: 632/1061 (59.6%)
# Similarity: 632/1061 (59.6%)
# Gaps: 211/1061 (19.9%)
# Score: 1669.5
#
#
#=======================================
BSNT_03692___ 1 ATGAAGG-----CACATACGGGAAAGGATTGGTTTTGGTACCAAATGGGG 45
||||..| || ||||.|||..|||...|||||.||..|.||.
BL02505___yqx 1 ATGAGAGTTTTTCA-----GGGAGAGGGCTGGACATGGTATCAGCTTGGC 45
BSNT_03692___ 46 CCTCAAGAAAGAAGTAAGG--CAAGGGATCTAATCCATTTTTC----TCA 89
|||||.||||.||..|..| |||||| ||.||||| .| |||
BL02505___yqx 46 CCTCACGAAAAAACAACAGCACAAGGG--CTGATCCA----GCCCGATCA 89
BSNT_03692___ 90 CTGGCCTCAGTGTGAAAAGTGGTTTGAA---------------AATAACC 124
.|||||..|.||...|||.||||||.|| || |
BL02505___yqx 90 TTGGCCGGAATGCCGAAACTGGTTTCAAGGCGTTCCCTCGGCCAA----C 135
BSNT_03692___ 125 ATCACGTTAATTTTTTGCGAGTAGATA-CAA--CTG------AAACGGAA 165
||| |||| |..|.|||| ||| ||| || |..
BL02505___yqx 136 ATC-----AATT------GCCTTGATATCAATGCTGCCGTTCAA---GGC 171
BSNT_03692___ 166 AATGAAGCGGTATTTGGGTCGAT-TGTTTATGATCAGG-GGCTTGGTGAA 213
||.||||||.|.|..||.|| || |.||||.||.|||| .|| .|||
BL02505___yqx 172 AAGGAAGCGATCTACGGTTC-ATATATTTACGACCAGGAAGC----GGAA 216
BSNT_03692___ 214 G---AAAAAGACCATACTGTTTTTCACTTTTATATCACCAGACAATATTT 260
| ||.||.|||..||.|..|||||.|||||..|.||.|.|.|.|||||
BL02505___yqx 217 GTTCAACAAAACCGGACAGCATTTCATTTTTACTTAACGAAAGACTATTT 266
BSNT_03692___ 261 TTTCACAATCAATTTTGACTTTTCG-ATTTTGAGAGAGATTAAAGGCAA- 308
|||||||||.|||||.||..|.||| |.||||| |.||||||
BL02505___yqx 267 TTTCACAATGAATTTAGATATCTCGCAATTTGA--------AGAGGCAAA 308
BSNT_03692___ 309 -AGAAGTTGTCCGGCAAATGGA---------AAGAGCGGACAATGCGATA 348
|||| |||..||.|| || |||| |||| |.|
BL02505___yqx 309 CAGAA-------GGCCGATCGATCAACACTTAA-AGCG----ATGC-AAA 345
BSNT_03692___ 349 ---------GAGGGGTTTTTAATTCTTCTCGGCGAACTAAT--GAATGCG 387
||.|.|||..|..|.||.||.||||||||.|| |||| |
BL02505___yqx 346 GACGCCCCTGAAGTGTTCCTGGTCCTGCTGGGCGAACTGATGAGAAT--G 393
BSNT_03692___ 388 TATTTAATCGGTGTTGATGAATTTGAAGTAAAGCTGAGAAAGCTCAGATG 437
|||||.|..|...||||..|.||||||||..|.||..||||..|.||.||
BL02505___yqx 394 TATTTGAAGGAACTTGAGCACTTTGAAGTTCACCTTGGAAAAGTAAGGTG 443
BSNT_03692___ 438 GCAAATTAAAGACGACAATAGCAAAAGC------------ATTC-TAAAC 474
|..|.||.|..|.|||||.|..|||||| |||| |||.|
BL02505___yqx 444 GGGATTTCATCATGACAACAATAAAAGCATCATTGAACTGATTCATAAGC 493
BSNT_03692___ 475 CGCGT--CCATCTCCTGCGCCATGAACTGATGATTTGGAA-AAATTTAAT 521
.|||| |.|.|||||| |.||| || ||.||||||
BL02505___yqx 494 GGCGTCACGAACTCCTG-GTCAT---------------AAGAAGTTTAAT 527
BSNT_03692___ 522 ATTAAGCG-CCAAAAAAATTGAAAT-GGCGTTGAAAGAAACCTTTTTACC 569
||.|.|| ..|||||..|||.||| |||.|| ||||||||.||||||.|
BL02505___yqx 528 -TTTATCGATGAAAAAGGTTGCAATGGGCCTT-AAAGAAACTTTTTTAAC 575
BSNT_03692___ 570 TCAAA----ATGAAGGGAAAAAGGATTATCAGC---GGAC-----ACAAC 607
|||| .|||.| |||..| |.|||| |||| ||
BL02505___yqx 576 -CAAATCGTTTGACG---AAATCG---AACAGCGCAGGACGTTTTAC--- 615
BSNT_03692___ 608 TGAAAATTGACAGGGGATTTTCATACATCA--------GCGAATTTGAAG 649
.||||.|||||.||..|.||||..|||| ||||||
BL02505___yqx 616 --GAAATCGACAGAGGCATGTCATTGATCAAAGAGTATGCGAAT------ 657
BSNT_03692___ 650 GGGAGCTTAACAATCTGCTGCATTCAGAGGAAGTCATTACCTCACATAGG 699
||..|.||..||.||||.|||||.||||||||..|.||.||.||.||.
BL02505___yqx 658 --GAAATCAATTATTTGCTTCATTCCGAGGAAGTGGTGACATCCCACAGA 705
BSNT_03692___ 700 GGGAATGAAATTGTAAAAGCGCTGACCATTTTTACGACGCTTTTTACGCC 749
||.|||||||||.|.|||||||||||.||||||||||||.|.||||||||
BL02505___yqx 706 GGCAATGAAATTTTTAAAGCGCTGACGATTTTTACGACGATCTTTACGCC 755
BSNT_03692___ 750 GATAACAGCTCTGGGTGCCTTATGGGGGATGAACTTTTCAGTGATGCCGG 799
|||.||.|||.|.||.|||.|.|||||.||||||||...|||.|||||.|
BL02505___yqx 756 GATGACGGCTTTCGGCGCCCTGTGGGGAATGAACTTCGAAGTCATGCCTG 805
BSNT_03692___ 800 AACTGAATTGGAAATACGGATATCTCTTTTCCCTCTTATTGATTGTCACA 849
||||...||..||.|||||.|||.|.|||||.||..|.||.||.|.|...
BL02505___yqx 806 AACTCTCTTTAAAGTACGGCTATTTATTTTCGCTTATTTTAATCGCCGTT 855
BSNT_03692___ 850 TCTACAGTTCTGATCTATCTCTATTTGAGAAAAAAAGGCTGGACGGGAGA 899
||.||.|..||..|.|||...|||||||.|||.|||||||||||.||.||
BL02505___yqx 856 TCGACCGCCCTTGTGTATTGGTATTTGAAAAAGAAAGGCTGGACCGGCGA 905
BSNT_03692___ 900 TATGCTGCAGGAGCGGAAGA-AGAAAAAGAAACCTCGAAAAAGGCGGACT 948
|.|..|| ||| || |.||||.||.|..| |||||.|..||.||
BL02505___yqx 906 TTTATTG-AGG-------GATAAAAAACGATATAT-GAAAAGGAAGGGCT 946
BSNT_03692___ 949 CT-----ATAG 954
|| ||||
BL02505___yqx 947 CTTTTAAATAG 957
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.