Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03690 and BL02504
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:42
# Commandline: needle
# -asequence dna-align/BSNT_03690.1.5803.seq
# -bsequence dna-align/BL02504.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03690-BL02504.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03690-BL02504.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03690
# 2: BL02504
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 414
# Identity: 146/414 (35.3%)
# Similarity: 146/414 (35.3%)
# Gaps: 222/414 (53.6%)
# Score: 369.5
#
#
#=======================================
BSNT_03690 0 -------------------------------------------------- 0
BL02504 1 ATGAAACTGAAGGACATCATGACAACCAATGCTGAATGCTGCGAGCCTTC 50
BSNT_03690 0 -------------------------------------------------- 0
BL02504 51 TGCCCCGATTGCGGAAATTGCCGGTAAGATGCGTGATTACAATGTAGGTT 100
BSNT_03690 1 -----------------------------------AT-GTTTCA------ 8
|| ||||||
BL02504 101 CAATTCCGGTCTGCGAGAACGGAAAATTGACGGGGATCGTTTCAGACCGG 150
BSNT_03690 9 TATTTTGT-------------------------ACA---GCG--TGCCCC 28
.||.|||| ||| ||| |||.|.
BL02504 151 GATATTGTTATCAGATGTGTAGCTGAAAATGAAACAGATGCGGCTGCTCG 200
BSNT_03690 29 G--TTTTTTCACCAGTCATAT-----CAGGGTGACCGGATACGATGTC-- 69
| |.|..|.|.||..||.|| |||||.|.|||||| |||||
BL02504 201 GGATATCATGAGCACACAGATGGTGACAGGGCGCCCGGAT---ATGTCTG 247
BSNT_03690 70 ---AAG--------GCGCTTATGGCAGAGCATCAAATCCGCCGTTTACCG 108
||| |..||.|||||.||.||.|||||.|||.|..|.|||
BL02504 248 CTGAAGAGGCTGGTGATCTGATGGCGGAACACCAAATTCGCAGGCTGCCG 297
BSNT_03690 109 ATTCTTGAATATGGCCAAATTGCCGGTATTGTTGCATTAGGCGACCTTTC 158
|||.|||||.|||.||...|||.|||.||.|||||.||.||.||.||.||
BL02504 298 ATTGTTGAAGATGACCGTCTTGTCGGAATCGTTGCTTTGGGGGATCTCTC 347
BSNT_03690 159 CGT------------TGAGAAAGATACTGGTCAA----AAAGCG------ 186
||| |||||||| |.||..|| .|||||
BL02504 348 CGTCTCACATGCGGATGAGAAAG---CGGGAGAAGCTTTAAGCGAAATTT 394
BSNT_03690 187 --AAAACAGCATAA 198
|||.|.||.|||
BL02504 395 CAAAACCGGCTTAA 408
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