Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00763 and BL02503

See Amino acid alignment / Visit BSNT_00763 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:23
# Commandline: needle
#    -asequence dna-align/BSNT_00763___ydbD.1.5803.seq
#    -bsequence dna-align/BL02503___ydbD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00763___ydbD-BL02503___ydbD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00763___ydbD-BL02503___ydbD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00763___ydbD
# 2: BL02503___ydbD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 853
# Identity:     610/853 (71.5%)
# Similarity:   610/853 (71.5%)
# Gaps:          62/853 ( 7.3%)
# Score: 2162.0
# 
#
#=======================================

BSNT_00763___      1 ATGTTTAAGCACACAAAAATGCTGCAGCATCCTGCTAAACCAGATCGTCC     50
                     .||||.|||||.||.|||.||||||||.|.|||||.|||||.||..|.||
BL02503___ydb      1 TTGTTCAAGCATACGAAAGTGCTGCAGTACCCTGCCAAACCTGAAAGACC     50

BSNT_00763___     51 AGATCCATTATTCGCTAAAAAAATGCAAGAAATTTTAGGCGGGCAATTCG    100
                     .||.||..|.|||||.||.||||||||.||.||..|.|||||.||.|.||
BL02503___ydb     51 CGACCCTGTCTTCGCAAAGAAAATGCAGGAGATACTCGGCGGCCAGTACG    100

BSNT_00763___    101 GAGAAATTTCAGTTGCCATGCAGTACTTATTTCAAGGCTGGAACACAAGA    150
                     |||||||.||.||.||.|||||.|||.|.||||||||.|||||.||..|.
BL02503___ydb    101 GAGAAATATCTGTGGCGATGCAATACCTTTTTCAAGGGTGGAATACGCGG    150

BSNT_00763___    151 GGAAATGAAAAATACAAGGACTTGCTGATGGATACGGCAACCGAGGAGCT    200
                     |||||||||||.||.||.||.|||||||||||||||||..|.||.||..|
BL02503___ydb    151 GGAAATGAAAAGTATAAAGATTTGCTGATGGATACGGCGGCAGAAGAAAT    200

BSNT_00763___    201 CGGGCATGTTGAAATGATTGCAACAATGATTGCCAGACTTCTTGAGGATG    250
                     |||.||.||.|||||||||||.||.||||||||..|.||.|||||.||.|
BL02503___ydb    201 CGGACACGTCGAAATGATTGCGACGATGATTGCACGGCTGCTTGAAGACG    250

BSNT_00763___    251 CACCTCTTGATCAGCAGGAAAAAGCTGCTGAAGATCCGGTCATCGGCTCC    300
                     |.||..||.|..|||||||||||||.||.||.|||||.|||||||||.||
BL02503___ydb    251 CTCCGGTTTACGAGCAGGAAAAAGCAGCAGACGATCCTGTCATCGGCGCC    300

BSNT_00763___    301 ATCCTAGGCGGCATGAACCCTCACCATGCGATTGTATCAGGACTTGGCGC    350
                     ||..|.|||||.|||||||||||.||.||.||.||.|||||.||.||.||
BL02503___ydb    301 ATTATGGGCGGAATGAACCCTCATCACGCAATCGTTTCAGGTCTGGGGGC    350

BSNT_00763___    351 CATGCCTGAAAGCAGTACAGGCGTACCTTGGAGCGGCGGTTATATCGTAG    400
                     |||||||||||.|||.||.|||||.|||||||..|..||.|||||.||||
BL02503___ydb    351 CATGCCTGAAAACAGCACCGGCGTTCCTTGGAATGCAGGCTATATTGTAG    400

BSNT_00763___    401 CAAGCGGAAACCTGCTGGCAGACTTCCGCGCCAACCTGAATGCGGAATCT    450
                     |.|||||.|||||.|||||.|||.|.|||||.||..|.||.||.|||||.
BL02503___ydb    401 CGAGCGGCAACCTTCTGGCCGACCTGCGCGCAAATGTCAACGCTGAATCG    450

BSNT_00763___    451 CAGGGCCGTCTGCAGGTCGCACGCCTGTTTGAAATGACGGATGACAAAGG    500
                     ||.|||.|.|||||.||||||||.||||..||||||||||||||||||||
BL02503___ydb    451 CAAGGCAGACTGCAAGTCGCACGGCTGTACGAAATGACGGATGACAAAGG    500

BSNT_00763___    501 CGTCAAAGATATGCTCAGCTTCCTGCTGGCGCGTGACACGATGCACCAAA    550
                     |||..|||||||||||.|.||.||..||||..|.||.|||||||||||||
BL02503___ydb    501 CGTACAAGATATGCTCGGTTTTCTTTTGGCAAGAGATACGATGCACCAAA    550

BSNT_00763___    551 ATCAATGGCTTGCCGCCATTAAAGAATTAGAAGCACAGGAAGGTCCG--G    598
                     |.||.|||.|||||||.||.|||||..|.||||.|.|.|||||  ||  .
BL02503___ydb    551 ACCAGTGGATTGCCGCGATCAAAGAGCTGGAAGAAAAAGAAGG--CGTCA    598

BSNT_00763___    599 TTGTGCCGGGTACATTCCCGAAAGCGCTCGAAAAACAAGA--GTTCTCAC    646
                     |.|||||.|||||..|.|||..||.....||||||.||||  .|||.|||
BL02503___ydb    599 TCGTGCCCGGTACCGTTCCGCCAGAATATGAAAAAGAAGAAGTTTCGCAC    648

BSNT_00763___    647 ATCAGCTTAT-CAATTTCTCTGAAGGCGAAGAAAGCGCCCAGCAAAACTG    695
                      ||  .|||| ||||||.||.||.||.|||||||||||.|||....|.||
BL02503___ydb    649 -TC--TTTATACAATTTTTCGGATGGAGAAGAAAGCGCACAGTTTGAGTG    695

BSNT_00763___    696 GCTGAATGAAAAAGCGCCGGACGGAGAAGCCTTTGAATATGTGAAAGA--    743
                     |||||..|..||.|||||||||||||..|..|||.|.||||    |||  
BL02503___ydb    696 GCTGATAGGGAAGGCGCCGGACGGAGCGGAATTTCACTATG----AGAGC    741

BSNT_00763___    744 --------AGCAAAAACGTTTGGAGAAAAACCGGAGTT------------    773
                             .|||      |.||||||||||||||..||            
BL02503___ydb    742 GGCCCTGTCGCA------TATGGAGAAAAACCGGTCTTGAAGCCCGCTCC    785

BSNT_00763___    774 AAAACCAACACCGCCTTTTGTTCATAATACACTTCCGGGAC----GCGAA    819
                     |||||.||    ||        ||.|||||||.|    |||    |.|||
BL02503___ydb    786 AAAACGAA----GC--------CACAATACACCT----GACTATGGAGAA    819

BSNT_00763___    820 TAA    822
                     |||
BL02503___ydb    820 TAA    822


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_00763 and BL02503

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
