Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05561 and BL02501

See Amino acid alignment / Visit BSNT_05561 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:41
# Commandline: needle
#    -asequence dna-align/BSNT_05561___spoIIID.1.5803.seq
#    -bsequence dna-align/BL02501___spoIIID.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05561___spoIIID-BL02501___spoIIID.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05561___spoIIID-BL02501___spoIIID.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05561___spoIIID
# 2: BL02501___spoIIID
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 282
# Identity:     190/282 (67.4%)
# Similarity:   190/282 (67.4%)
# Gaps:          54/282 (19.1%)
# Score: 776.0
# 
#
#=======================================

BSNT_05561___      1 GTGCACGATTACATCAAAGAGCGAACAATCAAGATAGGGAAGTACATCGT     50
                                                                     ||
BL02501___spo      1 ------------------------------------------------GT      2

BSNT_05561___     51 GGAGACAAAGAAAACCGTTCGTGTCATTGCGAAGGAATTTGGTGTTTCCA    100
                     ||||||.||.|||||.||||||||.||.||||||||.|||||||||||||
BL02501___spo      3 GGAGACGAAAAAAACGGTTCGTGTGATAGCGAAGGAGTTTGGTGTTTCCA     52

BSNT_05561___    101 AAAGTACAGTACACAAGGATTTAACAGAGCGTCTGCCTGAAATTAACCCC    150
                     |||||||.||.|||||||||||.|||||..|.||||||||||||||.||.
BL02501___spo     53 AAAGTACCGTTCACAAGGATTTGACAGAAAGGCTGCCTGAAATTAATCCT    102

BSNT_05561___    151 GACTTGGCAAACGAAGTGAAAGAAATACTCGATTATCATAAATCCATCAG    200
                     |||.||||.||.|||||.||||||||.||.||||||||||||||.|||||
BL02501___spo    103 GACCTGGCCAATGAAGTAAAAGAAATTCTTGATTATCATAAATCAATCAG    152

BSNT_05561___    201 GCATTTAAGAGGAGGAGAAGCGACAAAGCTCAAATATAAAAAAGATGAAA    250
                     .|||||..|.||.||||||||.|||||.||.|||||.||.|||||.||||
BL02501___spo    153 ACATTTGCGGGGCGGAGAAGCAACAAAACTAAAATACAAGAAAGAGGAAA    202

BSNT_05561___    251 TTCTCGAAGGAGAGCCTGTTCAGCAATCGTAA    282
                     |..|.|||.||||.||.||   ||||   |||
BL02501___spo    203 TCTTTGAAAGAGAACCCGT---GCAA---TAA    228


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