Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05560 and BL02500
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:41
# Commandline: needle
# -asequence dna-align/BSNT_05560___mbl.1.5803.seq
# -bsequence dna-align/BL02500___mbl.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05560___mbl-BL02500___mbl.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05560___mbl-BL02500___mbl.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05560___mbl
# 2: BL02500___mbl
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1002
# Identity: 852/1002 (85.0%)
# Similarity: 852/1002 (85.0%)
# Gaps: 0/1002 ( 0.0%)
# Score: 3660.0
#
#
#=======================================
BSNT_05560___ 1 ATGTTTGCAAGGGATATTGGTATTGACCTCGGTACTGCAAATGTACTGAT 50
|||||||||||||||||||||||||||||.|||||.||.|||||.|||||
BL02500___mbl 1 ATGTTTGCAAGGGATATTGGTATTGACCTTGGTACAGCGAATGTGCTGAT 50
BSNT_05560___ 51 CCATGTTAAAGGTAAAGGAATTGTTCTGAATGAACCTTCCGTTGTTGCAC 100
||||||.|||||.|||||.|||||..|.||||||||.||.||.|||||.|
BL02500___mbl 51 CCATGTCAAAGGAAAAGGTATTGTCTTAAATGAACCATCAGTCGTTGCTC 100
BSNT_05560___ 101 TTGATAAAAACAGCGGCAAAGTGCTGGCGGTTGGCGAAGAGGCAAGACGA 150
||||.|||||||..||.||||||||.||.||.||.|||||.|||||..||
BL02500___mbl 101 TTGACAAAAACAATGGGAAAGTGCTCGCTGTCGGTGAAGAAGCAAGGAGA 150
BSNT_05560___ 151 ATGGTTGGACGTACACCTGGGAATATTGTTGCGATTCGCCCGCTGAAAGA 200
|||||.|||||||||||||||||||||||||||||.||.||..|.|||||
BL02500___mbl 151 ATGGTAGGACGTACACCTGGGAATATTGTTGCGATACGTCCATTAAAAGA 200
BSNT_05560___ 201 CGGAGTTATTGCTGACTTTGAAGTAACAGAAGCAATGCTGAAACATTTTA 250
|||.||.|||||.||.|||||||||||||||||.||||||||.|||||.|
BL02500___mbl 201 CGGCGTCATTGCCGATTTTGAAGTAACAGAAGCCATGCTGAAGCATTTCA 250
BSNT_05560___ 251 TTAACAAGCTGAATGTAAAAGGCCTGTTCTCAAAGCCGCGCATGCTCATT 300
||||||||||||||||||||||.||.||||||||||||||||||||.|||
BL02500___mbl 251 TTAACAAGCTGAATGTAAAAGGTCTTTTCTCAAAGCCGCGCATGCTGATT 300
BSNT_05560___ 301 TGCTGCCCGACGAATATTACATCCGTTGAGCAAAAAGCAATTAAAGAAGC 350
|||||||||||.||||||||.||.||.|||||.||.||.||||.||||||
BL02500___mbl 301 TGCTGCCCGACAAATATTACTTCTGTGGAGCAGAAGGCCATTAGAGAAGC 350
BSNT_05560___ 351 TGCAGAAAAAAGCGGCGGGAAACATGTGTACCTTGAAGAAGAACCTAAAG 400
|||.||||||||||||||.||.|||||.||..|.||.|||||||||||.|
BL02500___mbl 351 TGCCGAAAAAAGCGGCGGAAAGCATGTATATTTGGAGGAAGAACCTAAGG 400
BSNT_05560___ 401 TTGCCGCTATCGGCGCGGGTATGGAAATATTCCAGCCAAGCGGTAACATG 450
|.|||||.|||||.|||||.|||||.||.||||||||||||||.||||||
BL02500___mbl 401 TGGCCGCAATCGGAGCGGGAATGGATATTTTCCAGCCAAGCGGAAACATG 450
BSNT_05560___ 451 GTTGTAGACATCGGAGGCGGGACGACGGATATCGCGGTTATTTCAATGGG 500
||.||.||.|||||.||.||.|||||.||||||||.||.||.||||||||
BL02500___mbl 451 GTAGTTGATATCGGCGGTGGAACGACAGATATCGCAGTCATCTCAATGGG 500
BSNT_05560___ 501 CGATATTGTCACCTCCTCTTCTATTAAAATGGCTGGGGACAAGTTTGACA 550
|||||||||||||.||||||||||||||||||||||||||||||||||..
BL02500___mbl 501 CGATATTGTCACCGCCTCTTCTATTAAAATGGCTGGGGACAAGTTTGATC 550
BSNT_05560___ 551 TGGAAATCTTAAATTATATCAAACGCGAGTACAAGCTGCTGATCGGCGAA 600
|.||||||||.||.||.|||||||||||||||||||||||.||.||||||
BL02500___mbl 551 TTGAAATCTTGAACTACATCAAACGCGAGTACAAGCTGCTCATAGGCGAA 600
BSNT_05560___ 601 CGTACTGCGGAGGATATTAAGATTAAAGTCGCAACTGTTTTCCCAGACGC 650
||.||.||.||.||||||||||||||||||||||||||||||||||||||
BL02500___mbl 601 CGGACAGCCGAAGATATTAAGATTAAAGTCGCAACTGTTTTCCCAGACGC 650
BSNT_05560___ 651 ACGTCACGAGGAAATTTCCATTCGCGGACGGGACATGGTTTCCGGTCTTC 700
|||||||||||||||||||||.|||||.||.||||||||..|.||..|.|
BL02500___mbl 651 ACGTCACGAGGAAATTTCCATCCGCGGCCGCGACATGGTCACAGGATTGC 700
BSNT_05560___ 701 CAAGAACAATTACAGTAAACAGTAAAGAAGTTGAAGAAGCCCTTCGTGAA 750
|.|||||.|||||.||||..||.|||||.||.||.|||||.||.||.|||
BL02500___mbl 701 CGAGAACCATTACGGTAACGAGCAAAGAGGTGGAGGAAGCGCTGCGCGAA 750
BSNT_05560___ 751 TCTGTCGCTGTTATTGTTCAGGCTGCGAAACAAGTGCTCGAAAGAACACC 800
|||||..||||.|||||.||||||||.||.||.||||||||||||||.||
BL02500___mbl 751 TCTGTATCTGTCATTGTACAGGCTGCCAAGCAGGTGCTCGAAAGAACGCC 800
BSNT_05560___ 801 GCCTGAACTTTCTGCTGATATTATTGACCGCGGCGTTATTATTACCGGCG 850
||||||.||.||.||.||.|||||.|||.|.||||||||.|||||.||.|
BL02500___mbl 801 GCCTGAGCTGTCAGCCGACATTATCGACAGAGGCGTTATCATTACAGGAG 850
BSNT_05560___ 851 GAGGCGCGCTCTTAAACGGCCTTGACCAGCTGCTTGCTGAAGAGCTGAAG 900
|.|||||..|.||||||||.|||||||||||.|||||.|||||||||||.
BL02500___mbl 851 GCGGCGCATTGTTAAACGGTCTTGACCAGCTTCTTGCCGAAGAGCTGAAA 900
BSNT_05560___ 901 GTACCGGTCCTCGTTGCTGAAAATCCTATGGATTGCGTAGCCATCGGCAC 950
||.||.||.|||||||||||||||||.||||||||.||.||..||||.||
BL02500___mbl 901 GTGCCTGTTCTCGTTGCTGAAAATCCGATGGATTGTGTGGCAGTCGGTAC 950
BSNT_05560___ 951 AGGTGTCATGCTTGATAATATGGACAAGCTTCCTAAACGCAAACTAAGCT 1000
.|||||||||||||||||.||||||||||||||.||.||||||||.||||
BL02500___mbl 951 GGGTGTCATGCTTGATAACATGGACAAGCTTCCCAAGCGCAAACTGAGCT 1000
BSNT_05560___ 1001 GA 1002
||
BL02500___mbl 1001 GA 1002
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