Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05557 and BL02497
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:41
# Commandline: needle
# -asequence dna-align/BSNT_05557___flhP.1.5803.seq
# -bsequence dna-align/BL02497___flhP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05557___flhP-BL02497___flhP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05557___flhP-BL02497___flhP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05557___flhP
# 2: BL02497___flhP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 894
# Identity: 568/894 (63.5%)
# Similarity: 568/894 (63.5%)
# Gaps: 150/894 (16.8%)
# Score: 1643.0
#
#
#=======================================
BSNT_05557___ 1 ATGCTTAGGTCAATGCTAACGGCATCA---ACAACCTT--AAACCAGCTG 45
||||||||.||.|||.|.|||||.||| ||||..|| || |||
BL02497___flh 1 ATGCTTAGATCCATGATCACGGCTTCAAACACAATGTTTGAA-----CTG 45
BSNT_05557___ 46 CAGCAGCAGATTGACACTATCAGCAGCAACCTTTCAAACAGCAACACAAC 95
||..|.||.|||||.|.|||||||...||.|||.||||.|.|.|.|||||
BL02497___flh 46 CAAAAACAAATTGATAATATCAGCCATAATCTTGCAAATACCGATACAAC 95
BSNT_05557___ 96 CGGCTATAAGGCAAAAGATACGAATTTTTCTGAGCTTGTCAGACAGCA-A 144
.||.||||||||.|||.|.||||..|||||.|||||..||||.||||| |
BL02497___flh 96 GGGATATAAGGCGAAAAACACGAGCTTTTCGGAGCTGATCAGGCAGCAGA 145
BSNT_05557___ 145 TTCGATCAGGTTGATGAAAAAAACGAGGAAGTGGC-AAAAGCCCGAAAAA 193
|| ||.|||||..|.||.|||||..|.|||||.|| ..||| |.||||.|
BL02497___flh 146 TT-GAACAGGTAAACGAGAAAAATAATGAAGTAGCTGCAAG-CAGAAAGA 193
BSNT_05557___ 194 CGCCGCCCGG-CTTACGCCTTGGCGTCGGAGCGATGATGAATTCACGCCT 242
|||||||.|| ||| |||||.|||||||||||..|.|||| .||.|.
BL02497___flh 194 CGCCGCCAGGACTT-CGCCTCGGCGTCGGAGCCGTCATGA----CCGACC 238
BSNT_05557___ 243 GGTCTCTG-------ATCAAGGAAGCATTCAGAAGACCGATCGCGATCTG 285
|| ||| |.||.||||||.||.||.||||.|..||||||||.
BL02497___flh 239 GG---CTGACGCATAAGCAGGGAAGCCTTAAGGAGACGGGCCGCGATCTT 285
BSNT_05557___ 286 GATATCGCATTTACGTCTCCATACCAGTATCTT-CAGGTAAATGT----- 329
|||||.|||.|.||.|||||.||.||||| ||| |||||.|||||
BL02497___flh 286 GATATTGCACTGACTTCTCCTTATCAGTA-CTTCCAGGTCAATGTCGGCG 334
BSNT_05557___ 330 ---AAATGGAAACCGCCAGTATACGAGGGACGGGGCGCTGTATGTAACGC 376
||.|| ||.|||||.||.||||||||..|.||..|.||||
BL02497___flh 335 GGGAAGTG--------CAATATACAAGAGACGGGGCATTTTACCTTACGC 376
BSNT_05557___ 377 CGTCCGCTGCGAATGCCAACCAGCTGCAGCTCGTCACTGGAA--ATGGGT 424
|..|.||.|.|||.|||||||||.|||||||.||.|| ||| |.||..
BL02497___flh 377 CTGCGGCGGGGAACGCCAACCAGATGCAGCTTGTGAC--GAAAGAAGGAC 424
BSNT_05557___ 425 ATCCCGTACTTGATGAGAACGGCAATACAGTGAACATCGA-CAGCTCAAT 473
||.||||.||||||||.|||||.|||.|..|...|.||.| ||||.|.||
BL02497___flh 425 ATGCCGTCCTTGATGAAAACGGAAATGCCATCCGCTTCAACCAGCGCTAT 474
BSNT_05557___ 474 GAAGAATATCACCATCAA----TAAGAA-CGGCACCT-TAACCG---CAT 514
.||.| |||||| .|.||| |||.|..| |.|||| |.|
BL02497___flh 475 AAACA-------CATCAAAGTCGATGAATCGGGAAGTGTCACCGTTTCGT 517
BSNT_05557___ 515 CTGAC------GGAAACGCGGTTCAGCGGTTTAATCTTGG---CGT---- 551
|.||| |||.|.|||...|.|||.|||||.||.|| |||
BL02497___flh 518 CAGACAATCAGGGAGAAGCGCCACTGCGTTTTAACCTGGGGATCGTCCGG 567
BSNT_05557___ 552 --TGTCCAAGTGAATAACCCTCAAG----AGCTGAAATCCGAAGGGAATA 595
|||| ||.|||||.| |.|.||| |||||.|..|
BL02497___flh 568 GCTGTC---------AAACCTCAGGCTCTAACAGAA----GAAGGAAGCA 604
BSNT_05557___ 596 ACCTTTTCTCTATTGATAATGCGGCAGCTTTTGA----AGAGCTAAACGG 641
|||||||.||| |.|||| ..||| ||||| |||||
BL02497___flh 605 ACCTTTTTTCT-----------GTCAGC-GATGAATTGAGAGC--AACGG 640
BSNT_05557___ 642 CGCTAATAGACAA----AAC--ATC--GGCATGCAG-------------- 669
|.||.|| ||| ||| |.| ||| .||||
BL02497___flh 641 CTCTTAT---CAACCTGAACGGAGCCGGGC-GGCAGGACATTTCTCTAAA 686
BSNT_05557___ 670 -CAGGGCTCACTTGAGAT-GTCCAATGTCGATATTTCAGAA-CAAATGAC 716
|||||.|..||||| || .||.||||||||..|.|| ||| .|||||||
BL02497___flh 687 ACAGGGATTCCTTGA-ATCATCAAATGTCGACGTATC-GAAGGAAATGAC 734
BSNT_05557___ 717 AGATTTGATCACGTCCCAGCGTTCATATCAGCTGAACAGCAGAACGATCA 766
.|||.|||||.|.||.|||.|.||||||||..||||...|.|..|.||||
BL02497___flh 735 CGATCTGATCTCTTCGCAGAGGTCATATCAAATGAATTCCCGCGCCATCA 784
BSNT_05557___ 767 CAATGGGAGATCAAATGCTCGGTTTAATCAATTCAGTCAGATAA 810
|.|||||.|||||||||.|.||..|.|||||||||||..|.||.
BL02497___flh 785 CGATGGGCGATCAAATGATGGGGCTGATCAATTCAGTACGTTAG 828
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