Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05471 and BL02477
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:37
# Commandline: needle
# -asequence dna-align/BSNT_05471___ywtA.1.5803.seq
# -bsequence dna-align/BL02477___pgsC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05471___ywtA-BL02477___pgsC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05471___ywtA-BL02477___pgsC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05471___ywtA
# 2: BL02477___pgsC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 450
# Identity: 351/450 (78.0%)
# Similarity: 351/450 (78.0%)
# Gaps: 0/450 ( 0.0%)
# Score: 1359.0
#
#
#=======================================
BSNT_05471___ 1 ATGTTCGGATCAGATTTATACATCGCACTAATTTTAGGTGTACTACTCAG 50
|||||.||||||||||||||.|||||.||.||||||||.||..|||||||
BL02477___pgs 1 ATGTTTGGATCAGATTTATATATCGCCCTCATTTTAGGAGTCTTACTCAG 50
BSNT_05471___ 51 TTTAATTTTTGCGGAAAAAACAGGGATCGTGCCGGCAGGACTGGTTGTAC 100
|||.||||||||.||.|||||.||.||.||.||.||.||.||.||.||||
BL02477___pgs 51 TTTGATTTTTGCAGAGAAAACGGGAATTGTACCAGCCGGCCTCGTCGTAC 100
BSNT_05471___ 101 CGGGATATTTAGGACTTGTGTTTAATCAGCCGGTCTTTATTTTACTTGTT 150
||||.|||||.||||||||.||.|||||||||.|.||.||..|.||.|||
BL02477___pgs 101 CGGGTTATTTGGGACTTGTCTTCAATCAGCCGATTTTCATGCTGCTCGTT 150
BSNT_05471___ 151 TTGCTAGTGAGCTTGCTCACTTATGTTATCGTGAAATACGGTTTATCCAA 200
.|..|.||.||.|||||.||.|||||.||||||||||.|||..|.|||||
BL02477___pgs 151 CTTTTTGTCAGTTTGCTGACGTATGTCATCGTGAAATTCGGACTTTCCAA 200
BSNT_05471___ 201 ATTTATGATTTTGTACGGACGCAGAAAATTTGCTGCCATGCTGATAACAG 250
|.||||||||.|.|||||||||||||||||.||.||.||||||||.||.|
BL02477___pgs 201 AATTATGATTCTATACGGACGCAGAAAATTCGCAGCAATGCTGATTACGG 250
BSNT_05471___ 251 GGATCGTCCTAAAAATCGCGTTTGATTTTCTATACCCGATTGTACCATTT 300
|.||..|..|.|||||||..|||||||||.||||.|||.|..|.||.|||
BL02477___pgs 251 GAATTCTTTTGAAAATCGGTTTTGATTTTATATATCCGGTGATGCCGTTT 300
BSNT_05471___ 301 GAAATCGCAGAATTTCGAGGAATCGGCATCATCGTGCCAGGTTTAATTGC 350
||.||.||.|||||..|.||||||||.|||||||||||.||..|.||.||
BL02477___pgs 301 GAGATTGCCGAATTCAGGGGAATCGGAATCATCGTGCCGGGGCTGATCGC 350
BSNT_05471___ 351 CAATACCATTCAGAAACAAGGTTTAACCATTACGTTCGGAAGCACGCTGC 400
||||||||||||.|.|||.||.|||||.||||||.|.|||||.|||||..
BL02477___pgs 351 CAATACCATTCAAAGACAGGGATTAACGATTACGCTTGGAAGTACGCTTT 400
BSNT_05471___ 401 TATTGAGCGGAGCGACCTTTGCTATCATGTTTGTTTACTACTTAATTTAA 450
|||||||||||||.||.||.|..||.||||.||.||||||..||||.|||
BL02477___pgs 401 TATTGAGCGGAGCAACATTCGTCATTATGTATGCTTACTATCTAATCTAA 450
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