Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03294 and BL02471
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:58
# Commandline: needle
# -asequence dna-align/BSNT_03294___kdgK.1.5803.seq
# -bsequence dna-align/BL02471___kdgK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03294___kdgK-BL02471___kdgK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03294___kdgK-BL02471___kdgK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03294___kdgK
# 2: BL02471___kdgK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1032
# Identity: 686/1032 (66.5%)
# Similarity: 686/1032 (66.5%)
# Gaps: 123/1032 (11.9%)
# Score: 2060.5
#
#
#=======================================
BSNT_03294___ 1 ATGAAGCTTGATGCGGTGACATTCGGGGAATCAATGGCCATGTTTTACGC 50
|||..||||||||.|.||||.|||||.|||||.|||||.|||||||||||
BL02471___kdg 1 ATGTCGCTTGATGTGATGACCTTCGGAGAATCGATGGCTATGTTTTACGC 50
BSNT_03294___ 51 AAATG-AGTATGGAGGCCTTCATGAAGTATCCACTTTTTCTAAAGGGCTT 99
||||| ||.| ||.||.||.|||||.|..||..|.|||||.||||..|||
BL02471___kdg 51 AAATGAAGCA-GGCGGACTGCATGAGGCGTCTTCGTTTTCCAAAGCTCTT 99
BSNT_03294___ 100 GCCGGAGCAGAAAGCAATGTCGCCTGCGGCCTTGCCAGACTCGGATTCCG 149
||||||||.||||..||.||.|||..|||.||..|..|.||.||.||.||
BL02471___kdg 100 GCCGGAGCGGAAACAAACGTTGCCGTCGGACTGTCGCGCCTGGGTTTTCG 149
BSNT_03294___ 150 AATGGGATGGATGAGCAAGGTCGGCAATGATCAGCTCGGAACGTTTATTT 199
..|.||.||||||||||||||||||...|||..|||.|||||.|||||||
BL02471___kdg 150 GGTCGGCTGGATGAGCAAGGTCGGCGCCGATTCGCTTGGAACCTTTATTT 199
BSNT_03294___ 200 TACAAGAGCTTAAAAAAGAGGGAGTGGATGTGTCCCGTGTGA--TC---C 244
||.|.||..|.||||||||.||.||.||..|.|| ||| || |
BL02471___kdg 200 TAAATGAATTGAAAAAAGAAGGCGTCGACATTTC-----TGAAGTCAAAC 244
BSNT_03294___ 245 GC-TCGCAGGACG--AAAATCCCACCGGGC-TGCTGCTTAAGTCAAAAG- 289
|| .|||||..|| |.| ||||| |.|||||.||||||||.|
BL02471___kdg 245 GCACCGCAGACCGGCAGA-------CGGGCATACTGCTCAAGTCAAAGGT 287
BSNT_03294___ 290 TGAAAGAAGGCGACCCGCAAGTTACCTACTATAGGA----AAAACTCAGC 335
|||||| .||.|||||..|.||.||.||.|||.||| | |||||
BL02471___kdg 288 TGAAAG-CGGAGACCCTGATGTCACATATTATCGGAGCGGA----TCAGC 332
BSNT_03294___ 336 TGCAAGCAC-ATTAACTTCTGCTGAATATCCGAGAGATTATTTTCAATGC 384
.|||||||| ||.|.|.| ||.|||.||.|||..|||.|| ||||||
BL02471___kdg 333 CGCAAGCACGATGAGCAT-TGATGACTACCCGGCAGAGTA-TTTCAA--- 377
BSNT_03294___ 385 GCAGGC----CATTTGCATGTGACAGGCATTCCGCCTGC-CTTATCAGCC 429
|||.|| |||.||||||||||.|||||.||.||||| ||| |||...
BL02471___kdg 378 GCAAGCCAAACATATGCATGTGACGGGCATACCTCCTGCACTT-TCAAGG 426
BSNT_03294___ 430 GAGATGAAAGACTTCACGTACCATGTCATGAACGACATGAGAAACGCAGG 479
||.||||..|.||||.|...|||.|.|.|..||.|.||||.|||.|..||
BL02471___kdg 427 GAAATGAGGGGCTTCGCCCGCCACGCCGTTCACCAGATGAAAAAAGACGG 476
BSNT_03294___ 480 GAAAACCATTTCATTCGACCCTAATGTAAGACCTTC--GCTTTGGCCTGA 527
|||.||.|||||.||.|||||.|||.|..| |||| |||||||||.||
BL02471___kdg 477 GAAGACGATTTCGTTTGACCCGAATCTCCG--CTTCCAGCTTTGGCCGGA 524
BSNT_03294___ 528 TCAAGCA-ACAATGGTACACACAATCAACGATCTGGCTGGGCTTGCAGAC 576
|| |||| ||||||||.||.|||||.||.||..|.||.|.||..||||||
BL02471___kdg 525 TC-AGCAGACAATGGTTCATACAATTAATGAAATCGCCGCGCAGGCAGAC 573
BSNT_03294___ 577 TGGTTTTTCCCGGGTATCGCAGAGGGAGAGCTATTGACCGGAGAAAAAAC 626
||||||.|.|||||.|||...||.|||.|.||..||||.||....||..|
BL02471___kdg 574 TGGTTTCTGCCGGGGATCAATGAAGGAAAACTCCTGACAGGCTGCAATTC 623
BSNT_03294___ 627 ACCTGAAGGCATTGCCGACTATTATTTGAAAA-----------AAGGTGC 665
.||.||.|..||.||..|..|||||.| || ||||||
BL02471___kdg 624 TCCCGAGGATATCGCTAAACATTATGT---AATGCAGGGGGTCAAGGTG- 669
BSNT_03294___ 666 CAGCTTTGTCGCTATTAAACTCGGAAAAGAAGGCGCTTACTTTAAAACGG 715
.||||| ||.||.||.|||||||||||.||||| |||.|
BL02471___kdg 670 ----ATTGTC---ATCAAGCTTGGAAAAGAAGGGGCTTA--TTACA---- 706
BSNT_03294___ 716 GGACAAGTGAAGGATTTCTAGAAGG----CTGCCGGGTCGACCGGGTG-- 759
|||||...||| ..|||||| .|||||||| .|.|.||||
BL02471___kdg 707 GGACATCGGAA------AAAGAAGGTTATGTGCCGGGT-TATCAGGTGGA 749
BSNT_03294___ 760 -------GTTGATACGGTCGGCGCCGGAGACGGATTTGCAGTCGGTGTAA 802
||||||||.||.|||||.||.|||||.|||||.|||||..|.|
BL02471___kdg 750 GAAGGTTGTTGATACTGTTGGCGCTGGCGACGGTTTTGCCGTCGGCATGA 799
BSNT_03294___ 803 TCAGCGGTGTCCTAGACGGTTTGTCG-TACAAGGATGCGGTGCAAAGGGG 851
|||||||..|..|||||||..|..|| |..|| ||.||.||.||.||||.
BL02471___kdg 800 TCAGCGGCCTTTTAGACGGACTTCCGCTGGAA-GAAGCAGTTCAGAGGGC 848
BSNT_03294___ 852 AAATGCGATTGGCGCTTTGCAAGTGCA-GGCACCGGGGGATATGGACGGT 900
.||||||||.||.||..||...|| || |||.||||||||||||||||||
BL02471___kdg 849 CAATGCGATCGGAGCGCTGGCCGT-CATGGCTCCGGGGGATATGGACGGT 897
BSNT_03294___ 901 TTGCCGACCAGGGAGAAATT---AGCTTCTTTTTTAT--CTGCTCA-AAG 944
.|||||.|.|||||..|||| ||| |||||| |||...| ||.
BL02471___kdg 898 CTGCCGTCAAGGGATCAATTGAAAGC-----TTTTATGGCTGGAGAGAAA 942
BSNT_03294___ 945 AACGGTTCACCAAAAGAAAGG-GGATTATTAA 975
||| .|||||||.|.||| ||.|.|
BL02471___kdg 943 AAC----AACCAAAAAATAGGAGGTTGA---- 966
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