Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05437 and BL02459
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:34
# Commandline: needle
# -asequence dna-align/BSNT_05437.1.5803.seq
# -bsequence dna-align/BL02459___mnaA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05437-BL02459___mnaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05437-BL02459___mnaA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05437
# 2: BL02459___mnaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1143
# Identity: 919/1143 (80.4%)
# Similarity: 919/1143 (80.4%)
# Gaps: 156/1143 (13.6%)
# Score: 4313.0
#
#
#=======================================
BSNT_05437 1 ATGAAGAAACTAAAAGTCATGACAGTATTCGGCACGCGCCCTGAAGCCAT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BL02459___mna 1 ATGAAGAAACTAAAAGTCATGACAGTATTCGGCACGCGCCCTGAAGCCAT 50
BSNT_05437 51 AAAAATGGCGCCGCTCGTACTTGAATTAAGAAAATATCCTCAAATTGAGT 100
|||||||||.||||||||.||.|||||||||||||||||..|||||||||
BL02459___mna 51 AAAAATGGCTCCGCTCGTGCTAGAATTAAGAAAATATCCCGAAATTGAGT 100
BSNT_05437 101 CTTATGTGACGGTTACAGCCCAACATAGGCAAATGCTTGACCAGGTACTT 150
||||||||||||||||||||||.||.||||||||||||||||||||.|||
BL02459___mna 101 CTTATGTGACGGTTACAGCCCAGCACAGGCAAATGCTTGACCAGGTGCTT 150
BSNT_05437 151 GAAGCTTTTGACTTAAAGCCTGATTTTGATTTGAATATCATGAAAGAAAG 200
|||||||||.||.|||||||||||||||||||||||||||||||||||||
BL02459___mna 151 GAAGCTTTTAACATAAAGCCTGATTTTGATTTGAATATCATGAAAGAAAG 200
BSNT_05437 201 GCAAACGCTGGCTGAAATTACGTCTAATGCGCTTATGAAGCTAGACGAGC 250
||||||||||||||||||||||||||||||||||.|||||||.|||||||
BL02459___mna 201 GCAAACGCTGGCTGAAATTACGTCTAATGCGCTTGTGAAGCTGGACGAGC 250
BSNT_05437 251 TGTTTCAGTCCATCAAACCGGACATTGTGCTTGTTCACGGCGATACGACA 300
||||||||||.|||||||||||.|||||||||||.|||||.|||||||||
BL02459___mna 251 TGTTTCAGTCTATCAAACCGGATATTGTGCTTGTCCACGGTGATACGACA 300
BSNT_05437 301 ACGACATTTGCGGGTAGTCTTGCTGCTTATTATCACCAGATTTCCGTCGG 350
||||||||||||||.||||||||.||||||||||||||||||||||||||
BL02459___mna 301 ACGACATTTGCGGGGAGTCTTGCCGCTTATTATCACCAGATTTCCGTCGG 350
BSNT_05437 351 CCATGTAGAGGCGGGACTTAGAACCGGGAACAAATACTCGCCGTTTCCTG 400
|||||||||||||||.||.||.|||||.||||||||||||||||||||.|
BL02459___mna 351 CCATGTAGAGGCGGGGCTCAGGACCGGAAACAAATACTCGCCGTTTCCAG 400
BSNT_05437 401 AAGAGCTGAACAGGCTGCTGACGGGATCGATTGCCGATTTTCATTTTGCG 450
|||||||||||||||.||||||||||||||||||||||.|||||||||||
BL02459___mna 401 AAGAGCTGAACAGGCAGCTGACGGGATCGATTGCCGATCTTCATTTTGCG 450
BSNT_05437 451 CCGACAGAGCAGGCCGAAAAGAATTTACTCCACGAAAATAAAGATCCGGA 500
||||||||||||||||||.|||||.|.||||.|||||||||||||||.||
BL02459___mna 451 CCGACAGAGCAGGCCGAACAGAATCTGCTCCGCGAAAATAAAGATCCTGA 500
BSNT_05437 501 GACGATTTTCGTCACCGGAAATACCGCAATTGATGCACTTCGCACAACAG 550
||||||||||.||||.||||||||.|||||.|||||||||||||||||||
BL02459___mna 501 GACGATTTTCATCACTGGAAATACTGCAATCGATGCACTTCGCACAACAG 550
BSNT_05437 551 TAAGGGACGGCTATGCACATCCCGTCCTTGAAAAAATCGGAAGTGACAAG 600
||||||||||||||.||||.|||||.||||||||||||||||.|||.|||
BL02459___mna 551 TAAGGGACGGCTATTCACACCCCGTTCTTGAAAAAATCGGAAATGATAAG 600
BSNT_05437 601 ATGATTTTACTTACCGCACATCGGCGTGAAAATTTAGGGAAGCCGATGGA 650
|||||.||.||||||||.||.||.||.|||||||||||||||||||||||
BL02459___mna 601 ATGATCTTGCTTACCGCCCACCGCCGGGAAAATTTAGGGAAGCCGATGGA 650
BSNT_05437 651 AAACATGTTTAAAGCGATCAGGCGAATCGTCGAAGAATTTGACGGCGTAC 700
||||||||||||||||||||||||.|||||||||||.||.||||||||.|
BL02459___mna 651 AAACATGTTTAAAGCGATCAGGCGGATCGTCGAAGAGTTCGACGGCGTCC 700
BSNT_05437 701 AGGTCGTTTATCCCGTTCATCTCAATCCCGCTGTTCGTGAAGCGGCTGCA 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BL02459___mna 701 AGGTCGTTTATCCCGTTCATCTCAATCCCGCTGTTCGTGAAGCGGCTGCA 750
BSNT_05437 751 AAGCACTTCGGTGATTTGGATAAAGTCCATCTGTTAGAGCCGCTCGAAGT 800
|||||.|||||.||||||.||||||||||.|||.||||||||||||||||
BL02459___mna 751 AAGCATTTCGGCGATTTGAATAAAGTCCACCTGATAGAGCCGCTCGAAGT 800
BSNT_05437 801 CATCGATTTT-ACAACTTCGCTGCTGAAGCTCACTTCATCCTCACCGACT 849
|||||||||| |||||||.||.||||||||||||||||||||||||||||
BL02459___mna 801 CATCGATTTTCACAACTTTGCAGCTGAAGCTCACTTCATCCTCACCGACT 850
BSNT_05437 850 CGGGTGGGGTGCAGGAAGAAGCGCCGTCGCTTGGAAAGCCGGTCCTCGTG 899
|.||.||||||||||||||||||||||||||.||||||||||||||||||
BL02459___mna 851 CTGGAGGGGTGCAGGAAGAAGCGCCGTCGCTAGGAAAGCCGGTCCTCGTG 900
BSNT_05437 900 CTTCGCGATACTACGGAACGGCCAGAAGGCGTTCGGGCCGGTACGCTTAA 949
|||||||||||.|||||||||||.||||||||.|.||||||.||||||||
BL02459___mna 901 CTTCGCGATACGACGGAACGGCCCGAAGGCGTCCAGGCCGGGACGCTTAA 950
BSNT_05437 950 ACTGGCAGGAACGGATGAAGATAAGATCTATCAACTGA------------ 987
|||||||||.|||||||||||||||||.||.||.||||
BL02459___mna 951 ACTGGCAGGCACGGATGAAGATAAGATTTACCAGCTGACTAAACAGCTGT 1000
BSNT_05437 987 -------------------------------------------------- 987
BL02459___mna 1001 TGACCGATCAAGATGAATATCGAAAAATGTCCAGGGCTTCAAACCCGTAC 1050
BSNT_05437 987 -------------------------------------------------- 987
BL02459___mna 1051 GGGGACGGACAGGCTTCGCGGCGAATTGCGGAGGCGCTGCTTTATCGGTA 1100
BSNT_05437 987 ------------------------------------------- 987
BL02459___mna 1101 CGGATACCGAAGCGCGCGGCCTGATGTGTTTAAAGATAAATAA 1143
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