Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05575 and BL02457
See
Amino acid alignment /
Visit
BSNT_05575 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:42
# Commandline: needle
# -asequence dna-align/BSNT_05575___nrgB.1.5803.seq
# -bsequence dna-align/BL02457___nrgB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05575___nrgB-BL02457___nrgB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05575___nrgB-BL02457___nrgB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05575___nrgB
# 2: BL02457___nrgB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 353
# Identity: 270/353 (76.5%)
# Similarity: 270/353 (76.5%)
# Gaps: 4/353 ( 1.1%)
# Score: 1013.0
#
#
#=======================================
BSNT_05575___ 1 ATGAGCGGCCAAATGTTCAAGGTAGAAATTGTAACGCGTCCGGCAAATTT 50
||||||||.|||||||..||.||.|||||||||||.|||||..||||.||
BL02457___nrg 1 ATGAGCGGTCAAATGTATAAAGTGGAAATTGTAACCCGTCCTACAAACTT 50
BSNT_05575___ 51 TGAAAAGCTGAAGCAGGAACTCGGAAAAATCGGAGTGACCTCTCTGACTT 100
||||||||||||...|||.||.|..||||||||.||.||.||..|.||.|
BL02457___nrg 51 TGAAAAGCTGAAAACGGAGCTGGCCAAAATCGGGGTAACGTCCATTACGT 100
BSNT_05575___ 101 TCTCCAATGTACACGGCTGCGGCCTTCAAAAAGCACATACGGAGCTCTAT 150
|.|.||||||||||||.||||||||.|||||||..|||||.|||||.||.
BL02457___nrg 101 TTTACAATGTACACGGATGCGGCCTGCAAAAAGGGCATACTGAGCTTTAC 150
BSNT_05575___ 151 CGAGGGGTAAAAATAGAAAGCAATGTATACGAGCGTTTAAAAATAGAAAT 200
||.|||||.|||...|||||||||||.||.||..|.||||||.|.|||||
BL02457___nrg 151 CGCGGGGTCAAACGCGAAAGCAATGTGTATGAAAGGTTAAAAGTCGAAAT 200
BSNT_05575___ 201 TGTGGTCAGCAAGGTTCCTGTTGATCAAGTGACTGAGACCGCTAAAAGGG 250
.||.||||||||.||.|||||.||..|.|||.|.|||||.||..|||..|
BL02457___nrg 201 CGTCGTCAGCAAAGTGCCTGTCGAAAAGGTGGCCGAGACGGCGCAAAACG 250
BSNT_05575___ 251 TGCTGAAAAC--GGGATCACCGGGTGACGGTAAAATATTTGTCTATGAAA 298
|.|||||||| |||| |||.||||||||.||.||.||..|.||.||||
BL02457___nrg 251 TCCTGAAAACCGGGGA--ACCCGGTGACGGCAAGATCTTCATATACGAAA 298
BSNT_05575___ 299 TCAGCAATACGATCAACATCCGCACAGGCGAAGAAGGACCTGAAGCACTT 348
|.|..||.||.||||||||||||||||||||.|||||.|||||.||..|.
BL02457___nrg 299 TTAAAAACACCATCAACATCCGCACAGGCGAGGAAGGTCCTGACGCTTTA 348
BSNT_05575___ 349 TAA 351
|||
BL02457___nrg 349 TAA 351
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.