Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05574 and BL02456
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:42
# Commandline: needle
# -asequence dna-align/BSNT_05574___nrgA.1.5803.seq
# -bsequence dna-align/BL02456___nrgA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05574___nrgA-BL02456___nrgA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05574___nrgA-BL02456___nrgA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05574___nrgA
# 2: BL02456___nrgA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1243
# Identity: 915/1243 (73.6%)
# Similarity: 915/1243 (73.6%)
# Gaps: 59/1243 ( 4.7%)
# Score: 3223.0
#
#
#=======================================
BSNT_05574___ 1 ATGCAAATGGGCGATACAGTTTTTATGTTCTTTTGCGCTTTACTCGTGTG 50
|||||.|||||.||||||||.||||||||||||||||||||.||||||||
BL02456___nrg 1 ATGCAGATGGGGGATACAGTATTTATGTTCTTTTGCGCTTTGCTCGTGTG 50
BSNT_05574___ 51 GCTGATGACCCCGGGATTAGCGTTATTTTATGGAGGAATGGTAAAGAGCA 100
|||||||||.|||||..|.||.||||||||.|||||..|.||||.|||||
BL02456___nrg 51 GCTGATGACGCCGGGCATCGCTTTATTTTACGGAGGCCTTGTAAGGAGCA 100
BSNT_05574___ 101 AAAATGTGCTGAGTACTGCCATGCACAGTTTCTCTTCCATTGCCATCGTT 150
||||||||||.||.||.|..|||||||||||.|||||.||||||||||||
BL02456___nrg 101 AAAATGTGCTCAGCACCGTTATGCACAGTTTATCTTCAATTGCCATCGTT 150
BSNT_05574___ 151 TCCATCGTTTGGGTGCTGTTCGGATATACACTTGCCTTCGCACCAGGCAA 200
||.|||.|.|||.|..|||||||.|||.||||.||.|||||.||.||.||
BL02456___nrg 151 TCTATCATATGGATTTTGTTCGGCTATTCACTCGCTTTCGCTCCCGGAAA 200
BSNT_05574___ 201 TTCAATCATCGGCGGGCTGGAGTGGGCCGGCCTCAAAGGGGTCGGATTTG 250
..||.|.|||||.||..||||.|||..|||.||..|.||.|||||.||||
BL02456___nrg 201 CCCATTGATCGGGGGTTTGGATTGGATCGGACTGCACGGTGTCGGTTTTG 250
BSNT_05574___ 251 ATCC---GGGAGATTACAGCGATACCATCCCCCACTCGTTATTTATGATG 297
|.|| .|..|||||....||.||.|||||.||..||.|.|.|||||||
BL02456___nrg 251 AACCCAATGCCGATTATTCGGAGACGATCCCGCATACGCTTTATATGATG 300
BSNT_05574___ 298 TTCCAAATGACGTTCGCCGTTCTGACTACAGCGATTATTTCCGG-GGCTT 346
||||||.||||.||.|||||.|||||.||.|||||||||||||| .||||
BL02456___nrg 301 TTCCAATTGACATTTGCCGTCCTGACGACTGCGATTATTTCCGGAAGCTT 350
BSNT_05574___ 347 TCGCAGAGCGGATGCGATT--CGGCGCTT--TTCTTTTATTCTCGGTTTT 392
| ||.|||||.|||||.|| |||| ||| ||||| ||||||||..|
BL02456___nrg 351 T-GCGGAGCGCATGCGCTTTCCGGC-CTTTATTCTT---TTCTCGGTGCT 395
BSNT_05574___ 393 ATGGGCCTCTTTGGTTTACACACCCGTAGCGCACTGGGTATGGGGCGGCG 442
.|||||...|||.|||||..|.||.||.||.|||||||||||||||||.|
BL02456___nrg 396 CTGGGCGGTTTTCGTTTATTCGCCTGTCGCCCACTGGGTATGGGGCGGAG 445
BSNT_05574___ 443 GCTGGATCGGCCAGCTTGGAGCGCTCGATTTCGCCGGCGGCAATGTTGTT 492
|||||.|.|.|.||||.|||||..|.|||||.||||||||.||.||.|||
BL02456___nrg 446 GCTGGCTTGACGAGCTGGGAGCTATTGATTTTGCCGGCGGAAACGTCGTT 495
BSNT_05574___ 493 CATATTTCCTCCGGTGTGGCAGGACTTGTTCTTGCCATTGTGCTAGGCAA 542
||.|||||.|||||.||.||.||.||.||..||||.|||||.||.|||||
BL02456___nrg 496 CACATTTCTTCCGGGGTAGCCGGTCTGGTCGTTGCGATTGTTCTCGGCAA 545
BSNT_05574___ 543 ACGGAAAGA------CGGCACAGCGTCTTCTCCGCATAACCTCAT--TTA 584
.||||||.| ||.|||.| |.||.||.||||||.| |.|
BL02456___nrg 546 GCGGAAAAATATGAGCGACACCG------CCCCTCACAACCTCCTTCTGA 589
BSNT_05574___ 585 CACCTTCTTAGGAGGAGCTTTGATTTGGTTCGGCTGGTTCGGCTTTAACG 634
| |||.||..||..|| |||||||.||||||||.||||||||.||.||.|
BL02456___nrg 590 C-CCTGCTCGGGGCGA-CTTTGATCTGGTTCGGATGGTTCGGTTTCAATG 637
BSNT_05574___ 635 TCGGCAGCGCTTTGACTTTAGATGGTGTAGCCATGTACGCGTTCATCAAC 684
||||.|||||..||||..|.||||..||.||||||..|||.||.||||||
BL02456___nrg 638 TCGGAAGCGCGCTGACGATCGATGAAGTCGCCATGACCGCTTTTATCAAC 687
BSNT_05574___ 685 ACAAACACCGCGGCTGCAGCCGGGATCGCCGGCTGGATCGTAGTAGAATG 734
||.||.||.||.||.||.||.|||.|...|||||||||..|.|.||||||
BL02456___nrg 688 ACGAATACGGCTGCGGCCGCGGGGCTGATCGGCTGGATTTTGGCAGAATG 737
BSNT_05574___ 735 GATCATTAACAAAAAACCGACAATGCTCGGAGCGGTATCTGGCGCAATCG 784
|.|.|||||.||.||.|||||.||||||||.||.||.||.||.||.||.|
BL02456___nrg 738 GCTGATTAATAAGAAGCCGACGATGCTCGGCGCCGTCTCGGGAGCGATTG 787
BSNT_05574___ 785 CCGGGCTTGTCGCCATTACGCC-GGCTGCCGGATTTGTCACACCGTTCGC 833
|.||.||.|||||.|||||||| ||| ||.||.||||||||.||.|||.|
BL02456___nrg 788 CGGGACTCGTCGCGATTACGCCTGGC-GCAGGTTTTGTCACGCCATTCTC 836
BSNT_05574___ 834 TTCCAT-TAT-TATCGGCATCATCGGCGGAGCTGTTTGTTTCTGGGGAGT 881
.|| | ||| .|||||..|.|||||.|||...||.|||||||||||.||
BL02456___nrg 837 ATC--TGTATGGATCGGGCTTATCGGAGGAATCGTCTGTTTCTGGGGGGT 884
BSNT_05574___ 882 ATTCTCGCTTAAAAAGAAATTCGGATACGACGACGCGCTTGACGCCTTTG 931
.||.|||||.||.||.||||||||.|||||.||.|||||.||.|||||.|
BL02456___nrg 885 GTTTTCGCTCAAGAAAAAATTCGGGTACGATGATGCGCTCGATGCCTTCG 934
BSNT_05574___ 932 GCCTGCACGGGATCGGCGGCACATGGGGCGGAATCGCAACAGGATTATTC 981
|.||.||||||.|||||||.|||||||||||||||||.|||||.||.|||
BL02456___nrg 935 GACTTCACGGGCTCGGCGGGACATGGGGCGGAATCGCGACAGGTTTGTTC 984
BSNT_05574___ 982 GCAACAACCTCTGTTAACTCAGCGGGCGCAGATGGGTTATTTTACGGTGA 1031
||.||.||.|||||.|||.|||..||.||..|.|||.|.||||||||.||
BL02456___nrg 985 GCGACGACATCTGTCAACGCAGACGGTGCCAACGGGCTTTTTTACGGAGA 1034
BSNT_05574___ 1032 TGCA--AG----CTTAATCTGGAAACAAATCGTCGCCATCGCCGCCACTT 1075
|| || ||| ||||||||..|..|.||.||.||.||.||.|
BL02456___nrg 1035 --CATCAGTCTCCTT----TGGAAACAGCTGATTGCGATTGCTGCAACAT 1078
BSNT_05574___ 1076 ATGTTTTTGTATTTATTGTCACTTTCGTTATTATTAAATTTGTAAGCCTC 1125
||.|.|||||....||.|||||.|.||.|||||||||..|.||.||..||
BL02456___nrg 1079 ATTTGTTTGTCGCAATCGTCACATACGCTATTATTAAGATAGTCAGTATC 1128
BSNT_05574___ 1126 TTCCTTCCCCTTCGCGCAACCGAAGAAGAAGAGTCACTTGGG-CTTGA-C 1173
||..||...||.||.||..|.||.||.|||||.||| ||||| ||.|| |
BL02456___nrg 1129 TTTTTTAAACTCCGTGCCTCAGAGGATGAAGAATCA-TTGGGCCTCGATC 1177
BSNT_05574___ 1174 TTAACGATGCACGGGGAAAAAGCATATCAAGATTCTATGTGA- 1215
|| |||.|||||||.||||||||.|||||||||| |
BL02456___nrg 1178 TT-ACGCTGCACGGCGAAAAAGCGTATCAAGATT-------AA 1212
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