Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05510 and BL02447
See
Amino acid alignment /
Visit
BSNT_05510 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:39
# Commandline: needle
# -asequence dna-align/BSNT_05510___ywrA.1.5803.seq
# -bsequence dna-align/BL02447___ywrA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05510___ywrA-BL02447___ywrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05510___ywrA-BL02447___ywrA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05510___ywrA
# 2: BL02447___ywrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 548
# Identity: 387/548 (70.6%)
# Similarity: 387/548 (70.6%)
# Gaps: 22/548 ( 4.0%)
# Score: 1254.0
#
#
#=======================================
BSNT_05510___ 1 ATGAT-ATCGATCTATTTATTTATGGCGTTTTTTATCGCAAACCTACTGG 49
||||| ||| .|.|||.|.|||..|||.||.|||||.||||||.||.|||
BL02447___ywr 1 ATGATCATC-TTTTATCTGTTTTGGGCCTTCTTTATTGCAAACTTATTGG 49
BSNT_05510___ 50 GATATGGCGGCGGACCTGCGTCTATCCCGC-TAATGTTTGAAGAAGTCG- 97
|.||.||.|||||.||.||.||.||.|||| |||| |||||||||||.|
BL02447___ywr 50 GCTACGGAGGCGGGCCAGCTTCAATTCCGCTTAAT-TTTGAAGAAGTTGT 98
BSNT_05510___ 98 TAAACAGATACAGCTGGCTCTCAAACGATCAATTCTCAAATATGCTCGCA 147
|.|.||..|.|| ||||||.|||||.||..||||.|||||.|||||.||.
BL02447___ywr 99 TCAGCATTTTCA-CTGGCTGTCAAAAGAGGAATTTTCAAACATGCTTGCG 147
BSNT_05510___ 148 CTTGCGAACGCATTGCCGGGCCCGATCGCCACGAAAATCGCTGCGTATGT 197
|||||.||.||..||||.||||||||||||||.|||||.||.||.|||||
BL02447___ywr 148 CTTGCAAATGCGCTGCCAGGCCCGATCGCCACAAAAATTGCAGCTTATGT 197
BSNT_05510___ 198 CGGCTACAGCGCAGGCGGGTGGCCCGGCTTCCTAATTGCCCTGATCGCAA 247
|||||||||||....|||.||||||||..|..|.|||||.||...|||||
BL02447___ywr 198 CGGCTACAGCGTGCTCGGATGGCCCGGTGTTTTCATTGCTCTTGCCGCAA 247
BSNT_05510___ 248 CCGTCGTACCGTCGGCGCTCGCATTGATCGTCCTGCTGCGCA---TCATC 294
|.||..|.||.|||||..|||| |.||||..||||||.|| |.|||
BL02447___ywr 248 CTGTGCTTCCCTCGGCCATCGC---GCTCGTTTTGCTGCTCAAGCTGATC 294
BSNT_05510___ 295 CAGCGCTTCCGCCAATCACCTGTCATCAAAGGCATGACGCTGTCCGTCCA 344
...||||.||||||.||.|..|||.|||||||.|||||..||||.||.||
BL02447___ywr 295 GGCCGCTACCGCCAGTCGCAGGTCGTCAAAGGAATGACCTTGTCGGTTCA 344
BSNT_05510___ 345 GCCTGTCATCGCGGTCATGATGCTCATTCTTACCTGGCAAATCAGCGCAG 394
|||.||.||.||.||.||||||||..||.|.||.|||.|||||||||..|
BL02447___ywr 345 GCCGGTTATAGCCGTGATGATGCTTCTTTTAACATGGGAAATCAGCGGCG 394
BSNT_05510___ 395 ACGGCATCAAAGCGATCGGC-TGGATCCAATCGATCGTGATTGCGGGAAT 443
|||..|||.|..|||||||| ||| |.|||||..|.||.||.|||...||
BL02447___ywr 395 ACGCGATCCATTCGATCGGCATGG-TTCAATCACTTGTCATCGCGCTGAT 443
BSNT_05510___ 444 TTCGCTCCTT----GCCATGACAAAATTCAAAATGCATCCGGCATTTTTG 489
|||.|| |||.||||.||.|||....|.||||||||.||..||
BL02447___ywr 444 ----CTCTTTAGTCGCCTTGACGAAGTTCCGCGTCCATCCGGCTTTCCTG 489
BSNT_05510___ 490 ATTATCGCGGCGTTTTTATATGGGGGCCTTGTGATCCCTCATTTTTAG 537
||..|.|||||.||....||.||.||.|||||.||.||.|...|.|||
BL02447___ywr 490 ATCGTGGCGGCCTTCGCTTACGGCGGGCTTGTCATTCCGCTGCTGTAG 537
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.