Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05507 and BL02445

See Amino acid alignment / Visit BSNT_05507 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:38
# Commandline: needle
#    -asequence dna-align/BSNT_05507___ywrC.1.5803.seq
#    -bsequence dna-align/BL02445___ywrC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05507___ywrC-BL02445___ywrC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05507___ywrC-BL02445___ywrC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05507___ywrC
# 2: BL02445___ywrC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 480
# Identity:     363/480 (75.6%)
# Similarity:   363/480 (75.6%)
# Gaps:           6/480 ( 1.2%)
# Score: 1339.5
# 
#
#=======================================

BSNT_05507___      1 TTGAGTCATGAATATCAAATCCCCAACCTTGTACTTGATGAGACTGATAA     50
                     .||||.|..||.||.||.||.||.||..|..|.||.|||||.||.|||||
BL02445___ywr      1 GTGAGCCTCGACTACCATATGCCAAATTTAATTCTCGATGAAACGGATAA     50

BSNT_05507___     51 ACAAATTCTCACGATTTTGCATGAAGAAGGCAGAATTTCTTATACGGATC    100
                     |.||||.||..||||.||||||||.|||||.|||||.||||||||||||.
BL02445___ywr     51 AAAAATCCTTTCGATCTTGCATGAGGAAGGAAGAATCTCTTATACGGATT    100

BSNT_05507___    101 TTGGCAAAAGAGTCGATTTGTCACGGGTCGCCGTGCAGGCCCGTATCAAC    150
                     |.||.||..|.||.|...|.|||.|.||.|||||.|||.|.||.||||||
BL02445___ywr    101 TAGGAAAGCGTGTGGGACTCTCAAGAGTTGCCGTACAGACGCGGATCAAC    150

BSNT_05507___    151 CAATTAATTGAAGCCGGTGTTATTGAAAAATTCACCGCTGTCATCAATCC    200
                     .|.||.|||||||..||..|.||||||||||||||.||.|||||||||||
BL02445___ywr    151 AACTTGATTGAAGAAGGCATCATTGAAAAATTCACAGCCGTCATCAATCC    200

BSNT_05507___    201 CGCTAAAATCGGCATTCATGTTTCCGTGTTTTTCAATGTCGAGGTAGAAC    250
                     .|..||..||||.|||||.||.||.|||||||||||.||.||.||.||||
BL02445___ywr    201 AGTCAAGGTCGGGATTCACGTATCGGTGTTTTTCAACGTTGAAGTCGAAC    250

BSNT_05507___    251 CGCAATTTTTAGAAGAGGTCGCTCTTAAGCTTGAGGAA---GAGCCTGCG    297
                     |.||||.||||||.|..||.||..||  |||| .||||   |||||.||.
BL02445___ywr    251 CCCAATATTTAGAGGCTGTTGCCGTT--GCTT-TGGAAAAGGAGCCCGCC    297

BSNT_05507___    298 GTCACCAGCCTTTATCACATGACAGGCCCGAGCAAGCTGCATATGCATGG    347
                     ||.||.|||||.|||||.||||||||.||||||||||||||||||||.||
BL02445___ywr    298 GTGACAAGCCTCTATCATATGACAGGGCCGAGCAAGCTGCATATGCACGG    347

BSNT_05507___    348 GATCTTTGCCAACGATCAAGAAATGGAAGAATTTTTAACAAAACGGCTGT    397
                     .||.||.||.||.|||||.||.|||||.||||||||.||.||.||.||||
BL02445___ywr    348 CATTTTCGCAAATGATCAGGAGATGGAGGAATTTTTGACGAAGCGCCTGT    397

BSNT_05507___    398 ATCCATTGCGAGGCGTCGTCAGTGTTGATTGCCAGATGCTGATCAAACGA    447
                     |.||..||..||||||.||.||.||.||.||||||||||||||.|||||.
BL02445___ywr    398 ACCCCCTGAAAGGCGTGGTGAGCGTCGACTGCCAGATGCTGATTAAACGT    447

BSNT_05507___    448 TACAAAAGCCGTATGGGAATGAAGCTGTAA    477
                     ||.||.|||||.||||||||||||||.|||
BL02445___ywr    448 TATAAGAGCCGAATGGGAATGAAGCTTTAA    477


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