Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05466 and BL02437
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:36
# Commandline: needle
# -asequence dna-align/BSNT_05466___ywtE.1.5803.seq
# -bsequence dna-align/BL02437___ywtE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05466___ywtE-BL02437___ywtE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05466___ywtE-BL02437___ywtE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05466___ywtE
# 2: BL02437___ywtE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 897
# Identity: 614/897 (68.5%)
# Similarity: 614/897 (68.5%)
# Gaps: 72/897 ( 8.0%)
# Score: 1981.0
#
#
#=======================================
BSNT_05466___ 1 ATGAAATGTATTGCGATTGATCTAGACGGAACATTACTGAATAAAGAAAG 50
||||.||..||||||||.|||.|||||||.||..|..|.||||..|||||
BL02437___ywt 1 ATGAGATTAATTGCGATCGATTTAGACGGGACTCTTTTAAATACCGAAAG 50
BSNT_05466___ 51 CGTCATTTCTGCGGAAAACAGAGAGGCGATCAAGCGGGCCGTTGAT---- 96
|...||.||.||.||||||.|.|..||.|||||...|| ||.|.||
BL02437___ywt 51 CAAAATATCCGCAGAAAACCGGGCCGCTATCAAAAAGG-CGCTCATTTCA 99
BSNT_05466___ 97 GCCGGCATCCTCGTCACCATTTGCACGGGAAGAGCGACATTTGATGTAAA 146
|.|.||| ||||.|||||||||||||||.|.||.||||||||.|||||
BL02437___ywt 100 GACTGCA---TCGTAACCATTTGCACGGGACGGGCCACATTTGACGTAAA 146
BSNT_05466___ 147 GGCGCTGCTGGATGACTTGGACATCCCTATCATTGCAGCTAATGGCGGTA 196
.|||||.|||.|.||.|||||.||.||.||.||.||.||.||.||.||.|
BL02437___ywt 147 AGCGCTTCTGAACGATTTGGATATTCCGATTATCGCTGCAAACGGGGGAA 196
BSNT_05466___ 197 CGATCCATGACACGGGTTACCGTTTGA------------TAAGCCGGACA 234
||.||||.|| |||.| |||||.|.||.
BL02437___ywt 197 CGGTCCACGA------------TTTCAACTATAAACTCCTAAGCAGAACG 234
BSNT_05466___ 235 TTAATGGATCAGGAAGCCGGCAAAGCGATTGCTGATTACTT-ACTG-TCA 282
.|||||||..|||||||.||.|||..|...||..|.||||| ||.| |||
BL02437___ywt 235 CTAATGGACAAGGAAGCGGGAAAAAAGGCCGCCCAATACTTAACAGATCA 284
BSNT_05466___ 283 AAAAACATTTACTTTGAGGTATATACAGATGACCATCTGCTTTCTCCTTT 332
..|| ||.||.||.|||||.|||||.||.||....|||||||||||||.
BL02437___ywt 285 TCAA--ATCTATTTCGAGGTTTATACGGACGATGCGCTGCTTTCTCCTTA 332
BSNT_05466___ 333 TGACGGCAAAGC-TAAGCTGCACGCGGAGCTAGACATTCTAAAGAGCGCA 381
|||||| |.||| .|||||..|.||.|||||.||.||..|.|..|||||.
BL02437___ywt 333 TGACGG-AGAGCAGAAGCTTAAAGCAGAGCTCGATATCGTCACAAGCGCC 381
BSNT_05466___ 382 AATCCAAACGAGCAGACA--GATGAACTGTGGCAAGGAGCCATGACTCAA 429
||.||..|.|| ||||| |||...||.||||||||.||..|||||||.
BL02437___ywt 382 AACCCTGATGA--AGACAGGGATACGCTTTGGCAAGGCGCACTGACTCAG 429
BSNT_05466___ 430 TTCAAGCAATTTGGAATTAAACCAATCCCTCATAT---CGAATCTG-TTT 475
||.||.|||||.||.||.|||||..||||..|.|| ||| | |||
BL02437___ywt 430 TTTAAACAATTCGGCATCAAACCCGTCCCCGACATTCGCGA----GATTT 475
BSNT_05466___ 476 TTGAGGGCGGTGAAAATATTTATAAGCTTCTATGCTTCTCCTTTGATATG 525
||.|.||.|..|||.|||||||||||||..|.||||||||.|||||||||
BL02437___ywt 476 TTAACGGAGACGAACATATTTATAAGCTGTTGTGCTTCTCATTTGATATG 525
BSNT_05466___ 526 GACAAGCTGAAACAAGCGAAGGAAGAGCTGAAGCATC-----ATAAAAAA 570
||.||||||||..||||.||.||.||.|| .|| .|..||||
BL02437___ywt 526 GAAAAGCTGAAGAAAGCAAAAGATGATCT-----TTCTGCCTTTCCAAAA 570
BSNT_05466___ 571 CTGGCGCAAACCTCTTCCGGAAAACATATTATTGAAATCCTGCCGGCCTC 620
||||..|..||.||||||||||.||||||.||.||.||.|||||.|....
BL02437___ywt 571 CTGGGACTCACTTCTTCCGGAAGACATATCATCGAGATTCTGCCTGATGA 620
BSNT_05466___ 621 TTCAGGAAAAGGACGCGCGTTAACAAAGCTGG-CTGACA-TATACGGAAT 668
.||.||.|||||.|||||.||||.|.|||||| |.|.|| ||| |||||
BL02437___ywt 621 ATCCGGCAAAGGCCGCGCTTTAAAAGAGCTGGCCCGCCACTAT--GGAAT 668
BSNT_05466___ 669 TGAAACACAGGATATCTATGCGATCGGCGACAGTCCGAACGATTTGTCCA 718
.||.|.|.|.||.|||||.||||||||||||||.|||||||||.||||.|
BL02437___ywt 669 CGAGAAAAAAGACATCTACGCGATCGGCGACAGCCCGAACGATCTGTCAA 718
BSNT_05466___ 719 TGTTTGAAGTCTCAGGACACCGTATCGCCATGGAAAATGCGATTGATGAA 768
|||||||.|...|.||.||.||.|||||.||||..|||||.||.|||||.
BL02437___ywt 719 TGTTTGAGGAAGCCGGCCATCGGATCGCGATGGGCAATGCAATCGATGAG 768
BSNT_05466___ 769 TTAAAAGAAAAAAGCACCTTTGTCACAAAAAGCAATGACGAAAATGGTGT 818
.||||..|.|..|||||||||.||||.|||||||||||||||||.||.||
BL02437___ywt 769 CTAAAGCATATCAGCACCTTTATCACGAAAAGCAATGACGAAAACGGCGT 818
BSNT_05466___ 819 GGCCTACTTTATAGACCAGCTTCTTTCAGGA----CAATATGCATAA 861
.||.||.||.||..||.|.||.|| ||| .|||||..||||
BL02437___ywt 819 CGCTTATTTCATTAACAAACTGCT----GGAAAATGAATATCAATAA 861
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