Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01241 and BL02415
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:45
# Commandline: needle
# -asequence dna-align/BSNT_01241___yfnI.1.5803.seq
# -bsequence dna-align/BL02415___yfnI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01241___yfnI-BL02415___yfnI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01241___yfnI-BL02415___yfnI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01241___yfnI
# 2: BL02415___yfnI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2037
# Identity: 1437/2037 (70.5%)
# Similarity: 1437/2037 (70.5%)
# Gaps: 192/2037 ( 9.4%)
# Score: 5041.0
#
#
#=======================================
BSNT_01241___ 1 ATGAATGAAGAACTTAAAGTGTTTAAGAAAGTAGAGGTTGCCATGAAGAA 50
|||||.||
BL02415___yfn 1 ------------------------------------------ATGAAAAA 8
BSNT_01241___ 51 ACTTTTTTCTTACAAACTTAGCTTTTTTGTGCTGGCTGTTATACTGTTT- 99
|.|.||.|||.|.||.||.|||||||||||..|.||||| |||||
BL02415___yfn 9 AATATTCTCTCATAAGCTAAGCTTTTTTGTATTAGCTGT-----TGTTTT 53
BSNT_01241___ 100 ----TGGGCAAAAACGTATTTATCCTACAAGACT-----GAGTTTAATCT 140
|||||.|||||.|||...|||| ||| |||||||||.|
BL02415___yfn 54 TGTATGGGCTAAAACCTATGCTTCCT-----ACTTTTTAGAGTTTAATTT 98
BSNT_01241___ 141 TGGGGTAAAAGGCACAACTCAGGAGATCCTCCTGATATTTAACCCATTCT 190
.||.||.|||||..|.||.|||.|.||.||.|||.|..|.||||||||
BL02415___yfn 99 AGGTGTGAAAGGGTCTACGCAGCACATGCTGCTGTTCATCAACCCATT-- 146
BSNT_01241___ 191 CAAGCGC----CGTCTTCTTTTTAGGAC------TGGCTTTGCTGGCGAA 230
|.|| ||..|.|| |.|| ||||||||.|.||.||
BL02415___yfn 147 ---GAGCTTCACGATTGCT-----GCACTCGGTTTGGCTTTGTTTGCAAA 188
BSNT_01241___ 231 AGGGCG-------------TAAATCAGCCATTATT-ATGCTGATTATCGA 266
|||.|| |..|||| .|||.||| ||||||
BL02415___yfn 189 AGGCCGCCGGTCGGCGATATGGATCA-TCATCATTGATGCTG-------- 229
BSNT_01241___ 267 TTTCTTGATGACATTTGTGTTATATGCAAATATTTTATTCTATCGTTTCT 316
|||||||.||||..||||||||||||.|..|.||.||.|||||||
BL02415___yfn 230 -----TGATGACGTTTGCTTTATATGCAAATGTCCTGTTTTACCGTTTCT 274
BSNT_01241___ 317 TTGACGATTTCTTGACGTTCCCGAACATTAAACAGTCCGGAAACGTTGGA 366
||||.||.||.||||||||..|.|||.|.|||||..||||||||.|.||.
BL02415___yfn 275 TTGATGACTTTTTGACGTTTGCAAACTTAAAACAAGCCGGAAACCTCGGC 324
BSNT_01241___ 367 AACATGGGAGACGG-GATTTTCAGTATCATGGCCGGTCATGATATTTTCT 415
||.|||...||||| |.||||.| .||||||||...||||||.||..|||
BL02415___yfn 325 AATATGTCTGACGGCGTTTTTGA-CATCATGGCATTTCATGACATCGTCT 373
BSNT_01241___ 416 ATTTCTTAGATATTATCATTTTGATTGCGGTAT---TG-ATCTGGAGACC 461
|||||..||||.|.||||||||||||||..||| || |.||| ||
BL02415___yfn 374 ATTTCGCAGATTTGATCATTTTGATTGCTCTATGTGTGAAGCTG----CC 419
BSNT_01241___ 462 TGAATTAAAAGAATACA-AAATGAAAAAACGCTTTGCGTCTTTAG-TGAT 509
||||.|.||.|..| || ||.||||||||.|.|..||..||...| ||.|
BL02415___yfn 420 TGAACTGAAGGCGT-CACAACTGAAAAAAAGATGGGCTGCTGCCGTTGTT 468
BSNT_01241___ 510 CCTTTCTG-GGA-TCGCACTGTTTTTCATCAACC-TGCACTATGCGGAAA 556
| ||.| ||| |.||.|||||||||||||||| ||||.| |||.||.|
BL02415___yfn 469 C---TCGGCGGAGTGGCTCTGTTTTTCATCAACCTTGCAGT-TGCCGAGA 514
BSNT_01241___ 557 AAGACCGTCCGCAGCTGCTGACAAGAACGTTTGACCGCAATTATATCGTG 606
.||||||||||.||||..||||||||||.||||||||.|||||.|||||.
BL02415___yfn 515 CAGACCGTCCGGAGCTTTTGACAAGAACATTTGACCGAAATTACATCGTC 564
BSNT_01241___ 607 AAGTATTTAGGTCTGTACAACTACACCATTTATGACGGTGTGCAGACGGC 656
||||||||.||.|..|||||.||||..||.|||||.|||||.|||.|.||
BL02415___yfn 565 AAGTATTTGGGGCCTTACAATTACATGATCTATGATGGTGTTCAGGCCGC 614
BSNT_01241___ 657 TCAAACAGAAACG-----CAACGGGCCTATGCAAGCAGCGATGATTTAAC 701
||| ||||| |||..|||.||.||.||||||||.||..|.||
BL02415___yfn 615 TCA-----AAACGCGAGCCAAAAGGCATACGCGAGCAGCGACGACCTGAC 659
BSNT_01241___ 702 AAGCGTCGAGAATTACACGACGTCTCATTATGCGAAACCAAACGCCGAGT 751
.||||||...||.||.||.|..||.||||||||||||||.||.|.|||||
BL02415___yfn 660 GAGCGTCATCAACTATACAAATTCGCATTATGCGAAACCGAATGACGAGT 709
BSNT_01241___ 752 ACTTCGGCTCTGCCAAAGGCAAAAATATCATTAAAATTCACCTCGAAAGC 801
|.||||||.|.||.|||||.||.||.|||||.||.|||||..|.||||||
BL02415___yfn 710 ATTTCGGCGCAGCAAAAGGTAAGAACATCATCAAGATTCATTTGGAAAGC 759
BSNT_01241___ 802 TTCCAGTCATTCCTGATTGACTACAAGCTAAACGGTGAAGAGGTGACGCC 851
||||||.|.||..||||.||.||.|||||.|||||..||||.||.|||||
BL02415___yfn 760 TTCCAGACGTTTTTGATCGATTATAAGCTGAACGGAAAAGAAGTCACGCC 809
BSNT_01241___ 852 TTTCTTAAATAAACTTGCGCACGGCGGGGAAGATGTGACGTATTTTGATA 901
.|||||.||.||.||.|||||||||..|||.||..|||.||||||.||||
BL02415___yfn 810 GTTCTTGAACAAGCTGGCGCACGGCCAGGATGACATGATGTATTTCGATA 859
BSNT_01241___ 902 ACTTCTTCCATCAGACAGGCCAGGGAAAAACATCTGATGCCGAGCTGACA 951
||||.|||||||||||.|||||.||.||||||.|.||||||||..|||..
BL02415___yfn 860 ACTTTTTCCATCAGACCGGCCAAGGTAAAACAGCGGATGCCGAATTGATG 909
BSNT_01241___ 952 ATGGATAACTCGATCTTCGGTCTTCCTGAAGGCTCCGCGTTTGTGACGAA 1001
|||||.|||....|.|.|||.||||||||||||...||||||||.||.||
BL02415___yfn 910 ATGGACAACAGCCTTTACGGACTTCCTGAAGGCAGTGCGTTTGTAACAAA 959
BSNT_01241___ 1002 AGGCGAAAACACTTACCAATCGCTTCCTGCGATTTTAGACCAGAAGGAAG 1051
|||..||||.||.|||||.||.||.||.||||||.|..||||.||.||||
BL02415___yfn 960 AGGGCAAAATACGTACCAGTCCCTGCCGGCGATTCTGAACCAAAAAGAAG 1009
BSNT_01241___ 1052 GCTATACAAGCGCCGTCCTGCATGGTGATTACAAATCGTTCTGGAACCGT 1101
||||.|||||||||||.|||||.||.||.|||||.||.|||||||||||.
BL02415___yfn 1010 GCTACACAAGCGCCGTGCTGCACGGGGACTACAAGTCATTCTGGAACCGC 1059
BSNT_01241___ 1102 GACCAGATTTACAAACATATCGGATACGACAAGTTCTTTGACGCAAGTAC 1151
||||||.|.||.|||||.||.||.||.|||||.|||||||||||.||.||
BL02415___yfn 1060 GACCAGGTGTATAAACAAATTGGCTATGACAAATTCTTTGACGCCAGCAC 1109
BSNT_01241___ 1152 GTACGATATGTCGGATGAAAATGTGATTAACATGGGGCTT-AAGGATAAG 1200
.||.||||||||.||.||.|||.|..|.|||.| .||||| ||.||.|||
BL02415___yfn 1110 ATATGATATGTCAGAGGATAATCTCGTCAACCT-TGGCTTGAAAGACAAG 1158
BSNT_01241___ 1201 CCGTTCTTTACAGAATCGATTTCAAAGCTTGAATCTCTTAAACAGCCGTT 1250
|||||||||..||||||.|||.|.|||||..||||.||.||.||||||||
BL02415___yfn 1159 CCGTTCTTTGAAGAATCAATTCCGAAGCTGAAATCGCTCAAGCAGCCGTT 1208
BSNT_01241___ 1251 TTATGCGCATTTGATTACATTGACAAACCATTATCCGTTTAACCTTGATG 1300
.|||||||||||.||..|.|||||||||||.||||||||.|...|.||||
BL02415___yfn 1209 CTATGCGCATTTAATCTCGTTGACAAACCACTATCCGTTCATTTTGGATG 1258
BSNT_01241___ 1301 AAAAAGACGCGTCTCTTAAAAAAGCGACAACAGGCGATAACACAGTTGAC 1350
||.|.||.||..|.|||.||||.|..|||||.||.||.||.||.||.|||
BL02415___yfn 1259 AAGAGGATGCCACCCTTGAAAAGGGAACAACGGGAGACAAAACGGTAGAC 1308
BSNT_01241___ 1351 AGCTACTTCCAGACAGCGCGTTACCTTGACGAAGCGCTTGAGCAATTCTT 1400
.|.|||||||||||.|||||.||.|||||||||||||||||..|.|||||
BL02415___yfn 1309 GGTTACTTCCAGACGGCGCGCTATCTTGACGAAGCGCTTGAAGATTTCTT 1358
BSNT_01241___ 1401 CAAGGAGCTGAAGGAAGCCGGCCTGTATGACAACTCAGTCATCATGATTT 1450
.||.||||||||..||||.||..|.|.|||..|.||.||.||..||||.|
BL02415___yfn 1359 TAAAGAGCTGAAAAAAGCGGGATTATTTGATGATTCTGTTATAGTGATCT 1408
BSNT_01241___ 1451 ACGGTGACCATAACGGTATTTCTGAAAACCATAACCGAGCGATGAAAGAG 1500
|.||||||||.|||||.||.||.||.||.||.|||||.|||||||||||
BL02415___yfn 1409 ATGGTGACCACAACGGAATCTCAGAGAATCACAACCGTGCGATGAAAGA- 1457
BSNT_01241___ 1501 ATTCTT-GGAAAAGAGATCACAGATTATCAAAACGCACAGAACCAGCGTG 1549
|.|.|| ||.||||||||.|||...|||||||||||...|||.|||||.|
BL02415___yfn 1458 AGTATTAGGTAAAGAGATTACACCGTATCAAAACGCGATGAATCAGCGCG 1507
BSNT_01241___ 1550 TGCCGCTGATGATCCGCGTTCCTGGCAAAAAAGGCGGAGTGAACCATACG 1599
|.|||||.|||||||||.||||.|||||||||||||||||.|||||||||
BL02415___yfn 1508 TACCGCTTATGATCCGCATTCCGGGCAAAAAAGGCGGAGTCAACCATACG 1557
BSNT_01241___ 1600 TATGGCGGCGAAATTGACGTTATGCCGACACTTCTGCACTTAGAAGGAAT 1649
||||||||.|||||.||.||.||||||||||||||.|||.|..||||.||
BL02415___yfn 1558 TATGGCGGTGAAATGGATGTCATGCCGACACTTCTTCACCTGCAAGGTAT 1607
BSNT_01241___ 1650 TGATTCTCAG----AAATACATCAACTTTGGTACTGATTTATTCTCTAAA 1695
||| ||| ||||||||||||||||||||.||..|.||.||||||
BL02415___yfn 1608 TGA----CAGCAAAAAATACATCAACTTTGGTACAGACCTCTTTTCTAAA 1653
BSNT_01241___ 1696 GACCACGACGATACAGTGGCATTCAGAAACGGAGACTTCGTAACGCCGAA 1745
|||||||||.|.||.|||||.||||||||.|||.|||..|||||||||||
BL02415___yfn 1654 GACCACGACCAAACCGTGGCTTTCAGAAATGGAAACTATGTAACGCCGAA 1703
BSNT_01241___ 1746 GTACAC-ATCAGT----CGACAATATCATTTACGATACGAAGACAGGTGA 1790
|||||| ||.|.| |||| |.|.||.|||||.||||||||
BL02415___yfn 1704 GTACACGATGATTGATACGAC-----CGTATATGATACAAAGACAGG--- 1745
BSNT_01241___ 1791 AAAACTGA--AAGCG-AATGAAGAAACGAAGAATCTGAAAAC-AAGAGTG 1836
||||..|| |||.| ||..||||.|||.|.||.||||||.| .|| |||
BL02415___yfn 1746 AAAAGAGATCAAGGGCAACCAAGAGACGGAAAACCTGAAATCGCAG-GTG 1794
BSNT_01241___ 1837 AACCAGCAGCTGAGCCTTTCAGACAGTGTCCTGTACAAAGACTTGCTGAG 1886
..|.|.||||||...||.||.|||...||.||.||.|||||..||.||||
BL02415___yfn 1795 TCCGAACAGCTGGATCTGTCCGACCAAGTACTCTATAAAGATCTGTTGAG 1844
BSNT_01241___ 1887 GTTCCATAAACTAAATGATTTCA------AAGCC-GTTGATCCGTCAGAC 1929
.|||||..| ||||||| ||||| ||||||||.|||.|.
BL02415___yfn 1845 ATTCCACGA-------GATTTCAGACTTCAAGCCTGTTGATCCATCAAAA 1887
BSNT_01241___ 1930 TATCATTACGGCAAGGAAAAA----GAAATCAAATAA 1962
|||||||||||.||.|||||| || .|||||
BL02415___yfn 1888 TATCATTACGGAAAAGAAAAAACCGGA----GAATAA 1920
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