Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03509 and BL02414
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:30
# Commandline: needle
# -asequence dna-align/BSNT_03509___ansR.1.5803.seq
# -bsequence dna-align/BL02414___ansR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03509___ansR-BL02414___ansR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03509___ansR-BL02414___ansR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03509___ansR
# 2: BL02414___ansR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 392
# Identity: 234/392 (59.7%)
# Similarity: 234/392 (59.7%)
# Gaps: 85/392 (21.7%)
# Score: 636.5
#
#
#=======================================
BSNT_03509___ 1 ATGAATCTAGATCGTTTAACTGAATTGAGAAAAAAGAAAAATTGGTCGCT 50
||||||.|||||||.|||||...|.||||||||||.|||||.|||||..|
BL02414___ans 1 ATGAATTTAGATCGATTAACAACACTGAGAAAAAACAAAAAATGGTCATT 50
BSNT_03509___ 51 TCAATATACAGCTGACCTTCTCGGTATCGCAAAAAGCACATATGCCGGCT 100
.||||||||.||.||||..||||||||.||.||||||||.||.||.||||
BL02414___ans 51 GCAATATACTGCCGACCGCCTCGGTATTGCGAAAAGCACTTACGCGGGCT 100
BSNT_03509___ 101 ACGAGTCAGGCTACCGACGGCCTTCACTTGAAGCGCTTGCCATGC----T 146
|.||.||.||.|||||.||.|||||..|.||.|||||| || | |
BL02414___ans 101 ATGAATCGGGATACCGCCGCCCTTCTTTAGAGGCGCTT---AT-CGAAAT 146
BSNT_03509___ 147 GGCTGACCTCTTTGACACAACCTGCGATGAACTTTTAGGCCGCGAGAAAC 196
.|||||..|.||..|.||..||..|||| ||||.|..|| .
BL02414___ans 147 CGCTGATTTATTCAATACCTCCACCGAT----TTTTTGCTCG-------G 185
BSNT_03509___ 197 AAAAGCAGACTGCTCCTCAGGCCATAGAATTGGCCACGTGGA----GCAG 242
||.||..||| |.|||.|.|| || |||..|||.| | |.||
BL02414___ans 186 AAGAGTTGAC-GATCCCCGGG--AT-GAAAAGGCTA-----AAAACGAAG 226
BSNT_03509___ 243 CC-TTGACTTTACCATTTCTGTTGA-----TGGCC--AGC---CGCTG-- 279
|| |||| || ||| |||.| ||| .||||
BL02414___ans 227 CCATTGA----AC---------TGACGGATTGGGCTAAGCTCAAGCTGGC 263
BSNT_03509___ 280 AGT-------------------GAAGATGAAATCATCCAGCTGATTACCT 310
||| |||||.|||||||..|||.||.||.|.|
BL02414___ans 264 AGTCGACGGAACGCTTCTTTCCGAAGAAGAAATCAAGCAGATGGTTGCGT 313
BSNT_03509___ 311 TTAT-ACGCACAAAAAGAAAAGTACAGGAGGAACTGAGTTAA 351
|||| |.|..||| |||||..|.|||.| |.||||.|
BL02414___ans 314 TTATCAAGGTCAA----AAAAGGGCTGGATG--CGGAGTAA- 348
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