Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02191 and BL02413
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:42
# Commandline: needle
# -asequence dna-align/BSNT_02191___ykgB.1.5803.seq
# -bsequence dna-align/BL02413___ykgB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02191___ykgB-BL02413___ykgB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02191___ykgB-BL02413___ykgB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02191___ykgB
# 2: BL02413___ykgB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1122
# Identity: 719/1122 (64.1%)
# Similarity: 719/1122 (64.1%)
# Gaps: 147/1122 (13.1%)
# Score: 2108.0
#
#
#=======================================
BSNT_02191___ 1 ATGACAAAATACATAGGATATGTGGGAACATATACAAAAGGCGGA-AGCG 49
|||.|.|||||||.|||.|||.|.||||||||||||||| ||.|| ||||
BL02413___ykg 1 ATGGCGAAATACAGAGGTTATATCGGAACATATACAAAA-GCAGACAGCG 49
BSNT_02191___ 50 AAGGAATTTATTCATTTGAGCTTGATACTGAGAAAAAAGCACTCAGCGAG 99
.|||.||||||.||||||||||||||||.||.|||||.||..|.|||..|
BL02413___ykg 50 TAGGGATTTATACATTTGAGCTTGATACGGAAAAAAAGGCGTTAAGCACG 99
BSNT_02191___ 100 CCAAAGCTGGCCGCTAAGCTGGGCAACCCGACATATGTG----GCGCCGA 145
||.||||.|||.||.||||||||||..|||||||||.|| .||||
BL02413___ykg 100 CCGAAGCCGGCAGCAAAGCTGGGCAGTCCGACATATTTGAATATCGCC-- 147
BSNT_02191___ 146 ATAAAAACAACACCATCCTTTATTCCATCGAAAAAGCAGACGGC---CAA 192
|||.||||...|||.||||||.|..|.|..|| ||||||| .|.
BL02413___ykg 148 --AAAGACAATGACATGCTTTATGCAGTGGTCAA---AGACGGCGATAAG 192
BSNT_02191___ 193 GGCGGAGTTGCTGCCTATCAAATCGA----TAAAAACAGCGGCGAATTGA 238
|||||.|||||.||.||||..||.|| | .||..||.||..|||
BL02413___ykg 193 GGCGGGGTTGCCGCATATCGTATTGACGGTT----CCACAGGAGAGCTGA 238
BSNT_02191___ 239 CATTTC-TGAATCATCAGTTAATTGATGGCCCTTCGCCATGCCACGTAAG 287
| |.|| |.||.||.|||......||.||.||.|||||.||||||||.||
BL02413___ykg 239 C-TATCGTCAACCAGCAGACCGGGGAAGGACCGTCGCCTTGCCACGTCAG 287
BSNT_02191___ 288 CGTTGATGATCAAAATCA-----ATTCGTACTGACTGCCAATTATCACAG 332
||..||||||.||.| || ||.|||.|.||||||||.||||.
BL02413___ykg 288 ---TGTGGATCAAGATAACCGTTAT--GTTCTGTCCGCCAATTACCACAA 332
BSNT_02191___ 333 CGGGAAGGTACACGTTTTTCCGGTTCAGGAAGACGGCA---GCTTGCAAT 379
|||| |||.|.|| |||| .|||..|||
BL02413___ykg 333 CGGG-------ACGATCTT---------------GGCATATCCTTTAAAT 360
BSNT_02191___ 380 CA---------CCTGTTTCAGAGGCCGC-TCACA-------CA----GGA 408
.| ||||.|| |||.|..| |||.| || |||
BL02413___ykg 361 GAAAGCCGCGGCCTGCTT--GAGCCTTCATCAAAAGTACAGCATGAGGGA 408
BSNT_02191___ 409 AAAGGGCCGCACGAAAGACAAGAAAAACCGCATACACACTACGCGGGGTT 458
..|||.|||||.||.||.||.||||||.|||||||.||.||..|.||.||
BL02413___ykg 409 TCAGGACCGCATGAGAGGCAGGAAAAAGCGCATACTCATTATTCAGGATT 458
BSNT_02191___ 459 CACACCTGAACACAATTATGTGGTAGCGGTTGATTTAGGTATAGATAAGC 508
|.|||||||..|.||.||||..||.||.||.|||.|.||.|..|||.|..
BL02413___ykg 459 CTCACCTGATGAGAAATATGCAGTGGCCGTCGATCTCGGAACGGATCATA 508
BSNT_02191___ 509 TCTACACCTATAAGCTGAAAGA----CGGTGTGTTG-ACTGAATCCGGAA 553
||..|||.|||.|..||||||| |||..||..| |.|||| ||
BL02413___ykg 509 TCATCACGTATCAATTGAAAGAGGGCCGGCTTGAAGAAGTGAA-----AA 553
BSNT_02191___ 554 GCCATTCCTTCGCT------CCCGGTGCAGGACCTCGCCATATCGCTTTT 597
..|| |||| ||.||..||||.||..|.|||||||..||.
BL02413___ykg 554 AACA------CGCTGCTGCACCGGGCTCAGGGCCGAGACATATCGAGTTC 597
BSNT_02191___ 598 CATCCGAAAGAAAAATACGCTTATGTCATGACAGAATTAAGCAATGAAGT 647
|||||..|.|||||.||.||.|||||..|.|||||..|.||.||||||||
BL02413___ykg 598 CATCCACAGGAAAAGTATGCGTATGTATTAACAGAGCTGAGTAATGAAGT 647
BSNT_02191___ 648 GATTGCGCTTGAATACAACCCGACAGCC------GGCGAATTTAGAGAAA 691
.||.|.|||.|||||||||| || ||.|||||.|||||.|
BL02413___ykg 648 CATCGTGCTGGAATACAACC------CCGATTTGGGTGAATTCAGAGAGA 691
BSNT_02191___ 692 TCCAAGTCGTTTCTGCCATCCCTG-ATGATTTTACAG--ATAACAGCCAG 738
|.|||||..||||.||..|.||.| |.|.|||.||.| || |||||.
BL02413___ykg 692 TTCAAGTGATTTCGGCATTGCCGGAAGGCTTTGACGGCCAT---AGCCAA 738
BSNT_02191___ 739 GGAAGCGCAATACATGTCACGCAGGACGGACGTTTTGTTTATGTCGCAAA 788
||..||||.||.||..|||||.|.|||||....|||||.||.|...||||
BL02413___ykg 739 GGCGGCGCCATCCACATCACGAAAGACGGCAAATTTGTATACGCTTCAAA 788
BSNT_02191___ 789 CCGCGGCCATGACAGTATCGCCGTATTTGAAGTGAATCAA----TATTCA 834
|||||||||.|||||.||||||||.|| .||.| |||| |||||.
BL02413___ykg 789 CCGCGGCCACGACAGCATCGCCGTCTT--CAGCG--TCAACGAGTATTCG 834
BSNT_02191___ 835 GGAGAGCTGGCTTTC----GTAGAAAGAGTGTCGACAGAAGGAAACTGGC 880
||.|| .||||| ||.|||...||.||.||.|||||..|.||||
BL02413___ykg 835 GGCGA----ACTTTCCCTGGTTGAACACGTATCAACTGAAGGGGAATGGC 880
BSNT_02191___ 881 CTCGTGATTTTGTATTTGACCCAACGGAAGGGTTCCTCGTTGCTTCAAAT 930
|.||.||.||||...||||.||..|.||....|||.|.||||||||.||.
BL02413___ykg 881 CGCGCGACTTTGAGATTGATCCTTCAGAGCAATTCTTAGTTGCTTCCAAC 930
BSNT_02191___ 931 GAAGAAACAGGCAACCTTGTC-TTGTTTGAAAGAGACAAAGA-AACCGGC 978
.|.|||||||| .||.|||.| ||||||||||||||| ..|| |||.|||
BL02413___ykg 931 CAGGAAACAGG-GACTTTGACATTGTTTGAAAGAGAC-CGGACAACGGGC 978
BSNT_02191___ 979 CGATTGACACTCCTCCCATCAACGGTTTCTGTCCCTTACCCGGTTTGTGT 1028
||..||||.||..|....||....|||.|||..|||.|..||||||||||
BL02413___ykg 979 CGGCTGACGCTTTTAGAGTCTGGAGTTCCTGCTCCTGAAGCGGTTTGTGT 1028
BSNT_02191___ 1029 AAAGTTTTTACATCAAGTATAA 1050
.||.||||||||||| ||||
BL02413___ykg 1029 GAAATTTTTACATCA---ATAA 1047
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