Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04479 and BL02404
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:40
# Commandline: needle
# -asequence dna-align/BSNT_04479___menC.1.5803.seq
# -bsequence dna-align/BL02404___menC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04479___menC-BL02404___menC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04479___menC-BL02404___menC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04479___menC
# 2: BL02404___menC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1148
# Identity: 818/1148 (71.3%)
# Similarity: 818/1148 (71.3%)
# Gaps: 70/1148 ( 6.1%)
# Score: 2758.5
#
#
#=======================================
BSNT_04479___ 1 ATGATCGAAATAGAAAAAATCACGCTTTACCATTTGAGCATG-AACTTAA 49
|||||..||||..||.|..|.||..|.||||||.|.|||||| ..||.||
BL02404___men 1 ATGATTCAAATCAAACAGCTGACATTGTACCATCTCAGCATGCGGCTGAA 50
BSNT_04479___ 50 AGAAACCGTTTAAAAACAGTATCGAAACGCTTCAAGAGCGTAAATTTCTG 99
| ||.||.||||||...||..|.|||||..||||.||.||.||.|||.|.
BL02404___men 51 A-AAGCCTTTTAAATCAAGCTTGGAAACCTTTCAGGATCGCAAGTTTATC 99
BSNT_04479___ 100 ATCGTGGAAGCCATTGATACAA-CAGGTGTCACAGGCTGGGGAGAAGTTT 148
|||||.|||||...|||| ||| .||||||.|||||||||||.|||||.|
BL02404___men 100 ATCGTTGAAGCTGCTGAT-CAAGAAGGTGTGACAGGCTGGGGGGAAGTAT 148
BSNT_04479___ 149 CCGCTTTCTCTTCGCCTTGGTACACCGAGGAAACCATTGGA-ACATGTTT 197
|||||||.||.||.||.|||||||||||.|||| ||..||| |||||.|.
BL02404___men 149 CCGCTTTTTCATCTCCGTGGTACACCGAAGAAA-CAACGGAGACATGCTA 197
BSNT_04479___ 198 GCATATGCTAAAAGATTTTTTTATCCCAAATGTGGTCGGCCGTGA---AT 244
.||.|||||.|||||||||||.||.||...||||.| .||.|| ||
BL02404___men 198 CCACATGCTCAAAGATTTTTTGATTCCGGCTGTGCT---GCGCGAATCAT 244
BSNT_04479___ 245 TCAATCACCCTTCAGAAGTGCCGGACAGCCTGGCGCGTT-----AT--AA 287
|||..||||||||.||||||||.|| ||||| || || ||
BL02404___men 245 TCACACACCCTTCCGAAGTGCCCGA------GGCGC-TTCGCGGATTCAA 287
BSNT_04479___ 288 AGGAAACCGGATGGCAAAAGCGGGACTTGAATCGGCTGTATGGGATATCT 337
|||.|||||.||||||||.||.||.||||||.|.||..|.|||||.||.|
BL02404___men 288 AGGCAACCGAATGGCAAAGGCCGGCCTTGAAGCCGCCTTTTGGGACATTT 337
BSNT_04479___ 338 ATGCCA--AAAAGAAGGGCGTATCCCTTGCT----GAGGCATTGGGCGG- 380
|.|||| |||| ||||| |||.||| | |||||..|||||||
BL02404___men 338 ACGCCAGGAAAA-AAGGG---ATCTCTT--TAAGAGAGGCGCTGGGCGGA 381
BSNT_04479___ 381 --AACAAGAGATAAAGTCCCTGCCGGGGTGGTAGTCGGCCTGGCGCCTCT 428
||.||.|| ||||.||||||||.||.||.|||||.||.||.||..|
BL02404___men 382 GTAAAAACAG---AAGTTCCTGCCGGAGTCGTCGTCGGTCTTGCCCCATT 428
BSNT_04479___ 429 TGACGATATGCTGAAGGAAATTGAGAGCTATCAAAAAGAAGGTTATCAAA 478
.||.||||||||..||||||||||....|||..|||||||||.|||||||
BL02404___men 429 GGATGATATGCTTCAGGAAATTGAACAATATGTAAAAGAAGGATATCAAA 478
BSNT_04479___ 479 GAATAAAAATTAAAATTCAGCCTGGGCAGGATGTGGAATTGGTCAAGGCC 528
||||||||||.|||||||||||.|||||||||.|.||..|..|.||.|..
BL02404___men 479 GAATAAAAATCAAAATTCAGCCCGGGCAGGATATAGAGCTTTTAAAAGAA 528
BSNT_04479___ 529 ATCCGCAGCCGATTCCCAAACATCCCGCTCATGGCTGATGCCAATTCATC 578
||.|||.|.|..||.||.||..|.|||||.|||||.||||||||.||.||
BL02404___men 529 ATACGCCGGCATTTTCCGAAGGTGCCGCTGATGGCAGATGCCAACTCTTC 578
BSNT_04479___ 579 CTATGAGCTGAAGGATATCAGCC-GTTTAAAGGAGCTTGATGACTATCAT 627
.|||||..|.||.||.||||||| |.||||| ||||||||.|..|.|.|.
BL02404___men 579 TTATGAATTAAAAGACATCAGCCGGATTAAA-GAGCTTGACGCATTTAAA 627
BSNT_04479___ 628 TTAATGATGATTGAGCAGCCGCTCCAAGCTGACGATATCGTTGACCACCG 677
|||||||||||.||.||||||||....|.|||.|||||||||||||||||
BL02404___men 628 TTAATGATGATCGAACAGCCGCTGGCTGATGATGATATCGTTGACCACCG 677
BSNT_04479___ 678 CCACCTGCAGAAACATTTGAAAACGGCCATTTGCCTTGATGAGAGCATTT 727
|||.|||||.||||||.|.|||||..|.|||||.|||||.||.|||||..
BL02404___men 678 CCATCTGCAAAAACATATCAAAACATCAATTTGTCTTGACGAAAGCATCC 727
BSNT_04479___ 728 GTTCAGTTGATGATGCGAGACGGGCAATTGAGCTAGGAAGCTGCAAAATT 777
||||.|.||.|||||||.||..||||||||||||.||.||||||||||||
BL02404___men 728 GTTCGGCTGCTGATGCGCGAAAGGCAATTGAGCTCGGCAGCTGCAAAATT 777
BSNT_04479___ 778 ATTAATATAAAACCTTCTCGTGTCGGCGGCTTAACAGAAGCCTTAAAAAT 827
||.||||||||.||.||.||.||||||||.||.||||||||..|.|||||
BL02404___men 778 ATCAATATAAAGCCGTCCCGAGTCGGCGGTTTGACAGAAGCTCTGAAAAT 827
BSNT_04479___ 828 TCATGATTTATGCAAAGAGCATCATATGCAGGTTTGGTGCGGCGGAATGC 877
.||.||..|.||||||||.|||||.||||..||.|||||||||||.|||.
BL02404___men 828 CCACGACATCTGCAAAGAACATCAAATGCCTGTCTGGTGCGGCGGCATGT 877
BSNT_04479___ 878 TGGAAACAGGCATATCAAGAGCGCAGAACGTGGCGCTTGCTTCACTGCCT 927
|.|||||.|||||.||||||||.||.||..|.||.||...|||.||.||.
BL02404___men 878 TTGAAACCGGCATTTCAAGAGCCCATAATCTTGCACTGAGTTCTCTTCCG 927
BSNT_04479___ 928 CAATTCACAATACCTGGCGATATATCTTCATCCTCACGCTATTGGGATGA 977
||.||....||.||.||.|||.|.||||||||||||.|.||||||||.||
BL02404___men 928 CAGTTTTTGATTCCCGGGGATCTTTCTTCATCCTCAAGGTATTGGGAAGA 977
BSNT_04479___ 978 AGATATTGTAACCCCTGATATTCGTATTGATAATGGATTTATTTCTGTGT 1027
.|||||.||||..||.||.||.||.||.||....||.|.||||...||..
BL02404___men 978 GGATATCGTAAAACCGGAAATCCGGATCGAGGGCGGCTATATTCAGGTTC 1027
BSNT_04479___ 1028 CAAAACAGCCT-----GGTTTAGGGGTTGAGGT--AAACCAAGATATTAT 1070
||| ||| ||..|.||..||||.|| |.||..|.||.|||.
BL02404___men 1028 CAA-----CCTTACCGGGAATGGGATTTGAAGTCGATACTCATATTTTAA 1072
BSNT_04479___ 1071 GCGAAAAT--ATGTGACCAAAATGGATGTTTTCACACAGCATGGTTAA 1116
|..|.||| || |.|||||.||.|||||.|..||| |||
BL02404___men 1073 GAAAGAATTCAT----CTAAAATAGACGTTTTTAAGCAG------TAA 1110
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