Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06199 and BL02372
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:10
# Commandline: needle
# -asequence dna-align/BSNT_06199___yycG.1.5803.seq
# -bsequence dna-align/BL02372___yycG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06199___yycG-BL02372___yycG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06199___yycG-BL02372___yycG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06199___yycG
# 2: BL02372___yycG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1901
# Identity: 1399/1901 (73.6%)
# Similarity: 1399/1901 (73.6%)
# Gaps: 121/1901 ( 6.4%)
# Score: 5030.5
#
#
#=======================================
BSNT_06199___ 1 ATGAATAAGGTTGGTTTTTTTCGGTCGATCCAATTTAAGATTACCTTGAT 50
||||||||.||..||||||||||.|||||.||.||||||.|||||||.||
BL02372___yyc 1 ATGAATAAAGTAAGTTTTTTTCGCTCGATTCATTTTAAGTTTACCTTAAT 50
BSNT_06199___ 51 TTATGTGCTTTTGATTATCATTGCCATGCAAATCATTGGTGTGTATTTTG 100
.||.||.||..||||||||.|.||||||||.||.||.||.||.||.||||
BL02372___yyc 51 ATACGTTCTGCTGATTATCGTCGCCATGCAGATTATCGGCGTCTACTTTG 100
BSNT_06199___ 101 TCAATCAGGTAGAGAAGTCGCTGATCAGCTCTTATGAACAATCGT----T 146
|||||.||.|.||||||||.|| ||||| ||||.| |
BL02372___yyc 101 TCAATGAGATGGAGAAGTCACT-------TCTTA-----AATCATATAAT 138
BSNT_06199___ 147 GA--------ATCAGCGAATCGACAACCTTTCTTATTATATCGAACAAGA 188
|| |||||||..|..|||||||.||.||||||.|.|||||.||
BL02372___yyc 139 GACTCTCTTGATCAGCGGGTGAACAACCTATCGTATTATCTGGAACAGGA 188
BSNT_06199___ 189 ATAT-AAGAGCGATAACGACAGTAC--------CGTCATA-----AAGGA 224
| || |.||..|||| || ||.|| |||| || |||||
BL02372___yyc 189 A-ATGACGAAGGATA--GA-AGCACATCTTCCTCGTC-TACCTTGAAGGA 233
BSNT_06199___ 225 TGACGTCAG-CCGTATTTTGAATGACTTCACGAAAAGTGATGAGG----- 268
.||.| ||| .||.|||.|.|||||.|||| |.|||| .|||
BL02372___yyc 234 AGATG-CAGAGCGGATTCTAAATGATTTCA-GCAAAG----AAGGCGAAA 277
BSNT_06199___ 269 TTCGGGAAATTAGCTTTG-TAGATAAAAGCTATGAAGTGGTCGGTTCTTC 317
|||..|||.|.|| |.|| |.|||||||||||||||||..|||...|.||
BL02372___yyc 278 TTCTCGAAGTCAG-TCTGATTGATAAAAGCTATGAAGTCATCGCGACCTC 326
BSNT_06199___ 318 AAAGCCGTA----CGGTGAGGAAGTGGCTGGGAAACAAACGACCGATCTG 363
.||.||.|| || |||.|||||.||||||.|.||.||.||....
BL02372___yyc 327 CAATCCTTATAACCG----GGAGGTGGCGGGGAAAAAGACAACAGAGGGC 372
BSNT_06199___ 364 ATTTTCAAAAGAA---TTTTTTCTACCAAACAGTC-GTATT---TAAGAA 406
|||.|||||||.| |..|| ||| |.||| ||.|||
BL02372___yyc 373 ATTATCAAAAGGACGCTGCTT-----------GTCGGCATTCCATACGAA 411
BSNT_06199___ 407 AATA----TTATGACCCGAAAAGCAAAATCAGAGTTCTTATTTCCGCGAA 452
|||| ||..||||||.|..|..|.|.||.|||.|..|||||.|..|.
BL02372___yyc 412 AATAAATTTTTCGACCCGGAGCGGGACAGCAAAGTGCGGATTTCGGTCAC 461
BSNT_06199___ 453 GCCCGTCATGACTGAA------AATCAAGAGGTTGTGGGCGCGATCTATG 496
.|| ||.|.|| |||||||||....|.||.||.||.||.|
BL02372___yyc 462 ACC------GATTAAAAAATCGAATCAAGAGACAATCGGGGCCATTTACG 505
BSNT_06199___ 497 TTGTCGCGAGTATGGAAGATGTCTTTAATCAAATGAAGACGATCAACACG 546
|.||.||....|||||..||||||..||||||||...||||||||||||.
BL02372___yyc 506 TCGTGGCATCGATGGATAATGTCTACAATCAAATCCGGACGATCAACACC 555
BSNT_06199___ 547 ATACTGGCGTCCGGCACAGGTTTGGCACTTGTTTTGACGGCTCTTCTTGG 596
||..|.|||||.||.||...|.|.||.||||...|.||.|||.||||.||
BL02372___yyc 556 ATTTTAGCGTCTGGAACTTTTATTGCGCTTGGAATCACTGCTTTTCTCGG 605
BSNT_06199___ 597 TATTTTTCTGGCAAGAACCATTACCCACCCACTTTCAGATATGCGAAAGC 646
.||||||.|.||..||||.|||||.||.||.||.|||||||||.||||.|
BL02372___yyc 606 GATTTTTGTCGCGCGAACGATTACACATCCGCTGTCAGATATGAGAAAAC 655
BSNT_06199___ 647 AGGCGATGGAGCTTGCGAAAGGGAATTTCTCGAGGAAGGTTAAAAAGTAC 696
||||.||.||.||.||||||||.||||||||.||.||.||.|..||||||
BL02372___yyc 656 AGGCCATTGAACTGGCGAAAGGAAATTTCTCAAGAAAAGTCAGGAAGTAC 705
BSNT_06199___ 697 GGGCATGATGAAATTGGGCAGCTGGCCACAACGTTTAACCACTTAACGAG 746
||..|.||.|||||.||.||||||||||||||||||||..|.|||||.||
BL02372___yyc 706 GGAAACGACGAAATCGGCCAGCTGGCCACAACGTTTAATTATTTAACAAG 755
BSNT_06199___ 747 AGAGCTTGAAGATGCCCAGGCGATGACTGAAGGAGAACGCAGAAAGCTAG 796
||||||..||||.||.|||.|.|||||.|||||.|||||.|.|||.|||.
BL02372___yyc 756 AGAGCTGAAAGAAGCTCAGTCCATGACAGAAGGCGAACGAAAAAAACTAT 805
BSNT_06199___ 797 CCTCTGTCATTGCTTATATGACAGACGGCGTTATCGCCACAAACCGAAAC 846
|.|||||.|||||.||||||||||||||.||||||||.||.||||||||.
BL02372___yyc 806 CTTCTGTTATTGCGTATATGACAGACGGAGTTATCGCGACTAACCGAAAT 855
BSNT_06199___ 847 GGAGCGATTATTCT-CTTAA-ACAGCCCGGCGCTGGAACTGTTGAACGTT 894
||.|||||||||.| ||||| || .|||||||||||.||..|.||.|||
BL02372___yyc 856 GGCGCGATTATTTTGCTTAATAC--GCCGGCGCTGGAGCTTCTAAATGTT 903
BSNT_06199___ 895 TCACGTGAAACAGC-CTTAGAAATGCCGATTACGAGTT---TGCTGGGGC 940
|||||||||||.|| ||| |||||||||||.|| || ||||.||.|
BL02372___yyc 904 TCACGTGAAACGGCTCTT-GAAATGCCGATCAC---TTCGCTGCTCGGCC 949
BSNT_06199___ 941 TTCAAGA-GAATTATACTTTTGAAGATTTAGTGGAGCAGCAGGATTCTAT 989
||.|||| ||| ||.||.|||||||||||.||.||.|||||||||||..|
BL02372___yyc 950 TTGAAGACGAA-TACACGTTTGAAGATTTGGTTGAACAGCAGGATTCCCT 998
BSNT_06199___ 990 GCTGCTTGAAATTGAGCGCGATGATGAATTAACG---GTGCTTCGCGTGA 1036
|||.|||||||||||.| |.||.|||...||| |||||.|||||.|
BL02372___yyc 999 GCTTCTTGAAATTGAAC---AGGAAGAACGGACGTCTGTGCTCCGCGTCA 1045
BSNT_06199___ 1037 ATTTCTCTGTGATTCAAAGGGAACACGGCAAAATTGATGGTTTAATCGCT 1086
|||||||.||.||.||||..||||||||.||.||.||.||.||.||.||.
BL02372___yyc 1046 ATTTCTCGGTCATCCAAAAAGAACACGGAAAGATCGACGGATTGATTGCG 1095
BSNT_06199___ 1087 GTCATTTACGATGTAACCGAACAAGAGAAAATGGATCAGGAACGCAGAGA 1136
||||||||||||||.||.|||||||||.|.||.|||||.||.||.|||||
BL02372___yyc 1096 GTCATTTACGATGTCACAGAACAAGAGCAGATCGATCAAGAGCGGAGAGA 1145
BSNT_06199___ 1137 ATTCGTTGCGAATGTATCACATGAGCTGCGGACGCCGCTTACGACAATGC 1186
.||.|||||.|||||.||.||.|||||..|.||||||||.||.||.||||
BL02372___yyc 1146 GTTTGTTGCAAATGTCTCCCACGAGCTCAGAACGCCGCTCACAACGATGC 1195
BSNT_06199___ 1187 GCAGCTATTTAGAAGCGTTAGCCGAAGGCGCGTGGGAAAATAAAGACATT 1236
|.|||||..||||||||.|.||.|||||.||.|||.|..||..|.|||||
BL02372___yyc 1196 GAAGCTACCTAGAAGCGCTTGCGGAAGGGGCATGGCAGGATCCAAACATT 1245
BSNT_06199___ 1237 GCTCCGCGCTTCTT-AATGGTGACGCAAAATGAAACAGAGCGTATGATCC 1285
||.||||||||||| ||| |||||.||.||||||||||||||.||||||.
BL02372___yyc 1246 GCGCCGCGCTTCTTGAAT-GTGACACAGAATGAAACAGAGCGCATGATCA 1294
BSNT_06199___ 1286 GACTTGTCAATGATCTGCTTCAGCTGTCGAAATTTGACAGTAAGGATTAC 1335
|.||||||||.||.|||||.|||||.||.||.|||||.||.||.|||||.
BL02372___yyc 1295 GGCTTGTCAACGACCTGCTGCAGCTTTCAAAGTTTGATAGCAAAGATTAT 1344
BSNT_06199___ 1336 CAATTTAACCGGGAATGGATTCAGATTGTCCGGTTTATGTCACTTATTAT 1385
|||||.||....|||||||||||..||.||||.||..|.|||.|.|||||
BL02372___yyc 1345 CAATTCAATAAAGAATGGATTCATTTTATCCGTTTCTTCTCATTGATTAT 1394
BSNT_06199___ 1386 TGACCGTTTTGAAATGACAAAAGAGCAGCATGTGGAGTTTATCCGCAATC 1435
|||.||.|||||||||||.||||||||||||||.|||||||||.||||||
BL02372___yyc 1395 TGAACGCTTTGAAATGACGAAAGAGCAGCATGTTGAGTTTATCAGCAATC 1444
BSNT_06199___ 1436 TGCCGGACAGAGATCTGTATGTCGAGATTGACCAGGACAAAATAACGCAG 1485
|||||||.|||||..|||||||.||.||.||.|.||||||.||.|||||.
BL02372___yyc 1445 TGCCGGATAGAGAATTGTATGTTGAAATCGATCCGGACAAGATTACGCAA 1494
BSNT_06199___ 1486 GTGCTCGATAATATTATTTCTAATGCTTTAAAATATTCACCGGAAGGCGG 1535
|||||.||||||||.|||||.|||||.||.||||||||.||.|||||.||
BL02372___yyc 1495 GTGCTGGATAATATCATTTCAAATGCATTGAAATATTCCCCTGAAGGAGG 1544
BSNT_06199___ 1536 ACATGTCACGTTCTCTATTGATGTCAATGAAGAGGAAGAACTTCTCTATA 1585
.|||.|||||||||||.|||||||.||||||||.|||||.|||||.|||.
BL02372___yyc 1545 CCATATCACGTTCTCTGTTGATGTAAATGAAGAAGAAGAGCTTCTTTATG 1594
BSNT_06199___ 1586 TCAGCGTGAAGGATGAAGGGATCGGCATTCCAAAAAAAGATGTCGAAAAA 1635
||||.||.||.||.|||||..||||||||||.|.||||||.||.||.||.
BL02372___yyc 1595 TCAGTGTCAAAGACGAAGGTGTCGGCATTCCGAGAAAAGACGTGGAGAAG 1644
BSNT_06199___ 1636 GTCTTTGACCGCTTCTACAGGGTGGATAAAGCGAGAACGAGAAAGCTTGG 1685
.||||.||.||.||||||.|.||.||||||||.|||||.||||..||.||
BL02372___yyc 1645 ATCTTCGAGCGGTTCTACCGTGTAGATAAAGCCAGAACAAGAAGACTCGG 1694
BSNT_06199___ 1686 CGGCACTGGTCTGGGATTGGCGATTGCCAAGGAAATGGTACAGGCGCACG 1735
|||.||.||.||.||..|.|||||.||.||.|||||||||||.||.||..
BL02372___yyc 1695 CGGTACGGGACTCGGTCTTGCGATCGCAAAAGAAATGGTACAAGCCCATA 1744
BSNT_06199___ 1736 GTGGAGATATTTGGGCGGACAGCATAGAAGGAAAAGGCACGACGATAACA 1785
|.||.||.||.|||||.||||||||.|||||||||||.||.|||||.|||
BL02372___yyc 1745 GCGGCGACATCTGGGCCGACAGCATCGAAGGAAAAGGAACAACGATCACA 1794
BSNT_06199___ 1786 TTTACTCTTCCATATAAAGAGGAACAAGAGGATGATTGGGATGAAGCGTG 1835
|||||.||.||.||||||||.|||||||||||||||||||||||||||||
BL02372___yyc 1795 TTTACCCTGCCGTATAAAGAAGAACAAGAGGATGATTGGGATGAAGCGTG 1844
BSNT_06199___ 1836 A 1836
|
BL02372___yyc 1845 A 1845
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