Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00035 and BL02370

See Amino acid alignment / Visit BSNT_00035 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:41
# Commandline: needle
#    -asequence dna-align/BSNT_00035___yaaI.1.5803.seq
#    -bsequence dna-align/BL02370___yaaI.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00035___yaaI-BL02370___yaaI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00035___yaaI-BL02370___yaaI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00035___yaaI
# 2: BL02370___yaaI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 569
# Identity:     399/569 (70.1%)
# Similarity:   399/569 (70.1%)
# Gaps:          49/569 ( 8.6%)
# Score: 1277.5
# 
#
#=======================================

BSNT_00035___      1 TTGTCCAAAGCAGATACAGCCCTTCTCATT---GTAGACATGATCAATAA     47
                     |||||||      ||.||||   |||||||   ||.|||||.||.|||.|
BL02370___yaa      1 TTGTCCA------ATTCAGC---TCTCATTATAGTCGACATCATTAATGA     41

BSNT_00035___     48 TTTTGAATTCGATATGGGAGAAAC---CCTCGCTAAAAAAACAGAAAAA-     93
                     ||||.||||||||||||  |.|||   |.|..|.||||.|.||||||.| 
BL02370___yaa     42 TTTTCAATTCGATATGG--GTAACGTTCTTTCCAAAAAGACCAGAAATAT     89

BSNT_00035___     94 -ATCGTTCCTCATATTTTATCATTAAAGGAGCACGCGAGACAAAATG-AA    141
                      |.||   ..|||.||.|..|||||||.||.||||| ||.||||||| ||
BL02370___yaa     90 CACCG---AGCATCTTCTGGCATTAAAAGAACACGC-AGCCAAAATGAAA    135

BSNT_00035___    142 TGGCCGATTATTTACATCAATGATCATTATGGACTTTGGCAAGCTGACAT    191
                     |||||.||.||.|||||.|||||.||||.||||.||||||||||.||.||
BL02370___yaa    136 TGGCCTATCATATACATTAATGACCATTTTGGAATTTGGCAAGCGGATAT    185

BSNT_00035___    192 TAAAAACATTCAGCAAG-AATGCACAAATGAAAGAAGCAAGGATATCATC    240
                     |.....|||| |.|||| ||||||.|||.|..||.|||.|..||||||||
BL02370___yaa    186 TGCTGCCATT-ATCAAGAAATGCAAAAACGGCAGGAGCGAATATATCATC    234

BSNT_00035___    241 ACAAAGA-----TAGCTCCGAAAGA-TGCTGATTATTTTTTAATCAAACC    284
                          ||     |.||.|||||.|| .|| ||||||||||||||||||||
BL02370___yaa    235 -----GACCGGCTTGCACCGAATGACAGC-GATTATTTTTTAATCAAACC    278

BSNT_00035___    285 GAAACATTCCGCTTTCTACGAAACTGCACTTCACACCCTTCTTACTGAGT    334
                     .||.||.||.||.||.||||..|||||.|||.|.||..|.||...|||..
BL02370___yaa    279 AAAGCACTCAGCCTTTTACGGCACTGCTCTTGAAACATTGCTGCATGAAC    328

BSNT_00035___    335 TGCAGGT-GAGACATATTATCTTAACAGGTATAGCCGGCAATATATGTGT    383
                     |.||.|| || .|||.|.|||.|.||.||.||.||.||||||||.||.||
BL02370___yaa    329 TTCATGTCGA-TCATTTGATCATCACTGGGATCGCAGGCAATATCTGCGT    377

BSNT_00035___    384 GCTGTTTACTGCTAATGACGCTTATATGAGGGAATAC-AGCATCACGATT    432
                     ..|.|||||.||.||.||.|||||||||.||||.||| || ||.||||||
BL02370___yaa    378 ATTATTTACGGCAAACGATGCTTATATGCGGGAGTACGAG-ATTACGATT    426

BSNT_00035___    433 CCTAAGGACTGTATCGCGTCAAACAGTGACGAAGATAACGAATTCGCCTT    482
                     ||....||.||.|||||.|||||||.|||..||||.|||.|||.||||||
BL02370___yaa    427 CCGCGCGATTGCATCGCCTCAAACAATGAAAAAGACAACAAATACGCCTT    476

BSNT_00035___    483 AACTATGATGGAGAATGTTCTTTTCGCAGAAATTACGACGG--AAGAACA    530
                     .||.||||||||.||||||||.|||||..|.||.|||||||  |||  ..
BL02370___yaa    477 GACGATGATGGAAAATGTTCTGTTCGCCAATATCACGACGGCTAAG--GC    524

BSNT_00035___    531 AATTA---CAGAAAAATAA    546
                     .||||   |.||||..||.
BL02370___yaa    525 GATTACCTCCGAAACTTAG    543


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