Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00035 and BL02370
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:41
# Commandline: needle
# -asequence dna-align/BSNT_00035___yaaI.1.5803.seq
# -bsequence dna-align/BL02370___yaaI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00035___yaaI-BL02370___yaaI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00035___yaaI-BL02370___yaaI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00035___yaaI
# 2: BL02370___yaaI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 569
# Identity: 399/569 (70.1%)
# Similarity: 399/569 (70.1%)
# Gaps: 49/569 ( 8.6%)
# Score: 1277.5
#
#
#=======================================
BSNT_00035___ 1 TTGTCCAAAGCAGATACAGCCCTTCTCATT---GTAGACATGATCAATAA 47
||||||| ||.|||| ||||||| ||.|||||.||.|||.|
BL02370___yaa 1 TTGTCCA------ATTCAGC---TCTCATTATAGTCGACATCATTAATGA 41
BSNT_00035___ 48 TTTTGAATTCGATATGGGAGAAAC---CCTCGCTAAAAAAACAGAAAAA- 93
||||.|||||||||||| |.||| |.|..|.||||.|.||||||.|
BL02370___yaa 42 TTTTCAATTCGATATGG--GTAACGTTCTTTCCAAAAAGACCAGAAATAT 89
BSNT_00035___ 94 -ATCGTTCCTCATATTTTATCATTAAAGGAGCACGCGAGACAAAATG-AA 141
|.|| ..|||.||.|..|||||||.||.||||| ||.||||||| ||
BL02370___yaa 90 CACCG---AGCATCTTCTGGCATTAAAAGAACACGC-AGCCAAAATGAAA 135
BSNT_00035___ 142 TGGCCGATTATTTACATCAATGATCATTATGGACTTTGGCAAGCTGACAT 191
|||||.||.||.|||||.|||||.||||.||||.||||||||||.||.||
BL02370___yaa 136 TGGCCTATCATATACATTAATGACCATTTTGGAATTTGGCAAGCGGATAT 185
BSNT_00035___ 192 TAAAAACATTCAGCAAG-AATGCACAAATGAAAGAAGCAAGGATATCATC 240
|.....|||| |.|||| ||||||.|||.|..||.|||.|..||||||||
BL02370___yaa 186 TGCTGCCATT-ATCAAGAAATGCAAAAACGGCAGGAGCGAATATATCATC 234
BSNT_00035___ 241 ACAAAGA-----TAGCTCCGAAAGA-TGCTGATTATTTTTTAATCAAACC 284
|| |.||.|||||.|| .|| ||||||||||||||||||||
BL02370___yaa 235 -----GACCGGCTTGCACCGAATGACAGC-GATTATTTTTTAATCAAACC 278
BSNT_00035___ 285 GAAACATTCCGCTTTCTACGAAACTGCACTTCACACCCTTCTTACTGAGT 334
.||.||.||.||.||.||||..|||||.|||.|.||..|.||...|||..
BL02370___yaa 279 AAAGCACTCAGCCTTTTACGGCACTGCTCTTGAAACATTGCTGCATGAAC 328
BSNT_00035___ 335 TGCAGGT-GAGACATATTATCTTAACAGGTATAGCCGGCAATATATGTGT 383
|.||.|| || .|||.|.|||.|.||.||.||.||.||||||||.||.||
BL02370___yaa 329 TTCATGTCGA-TCATTTGATCATCACTGGGATCGCAGGCAATATCTGCGT 377
BSNT_00035___ 384 GCTGTTTACTGCTAATGACGCTTATATGAGGGAATAC-AGCATCACGATT 432
..|.|||||.||.||.||.|||||||||.||||.||| || ||.||||||
BL02370___yaa 378 ATTATTTACGGCAAACGATGCTTATATGCGGGAGTACGAG-ATTACGATT 426
BSNT_00035___ 433 CCTAAGGACTGTATCGCGTCAAACAGTGACGAAGATAACGAATTCGCCTT 482
||....||.||.|||||.|||||||.|||..||||.|||.|||.||||||
BL02370___yaa 427 CCGCGCGATTGCATCGCCTCAAACAATGAAAAAGACAACAAATACGCCTT 476
BSNT_00035___ 483 AACTATGATGGAGAATGTTCTTTTCGCAGAAATTACGACGG--AAGAACA 530
.||.||||||||.||||||||.|||||..|.||.||||||| ||| ..
BL02370___yaa 477 GACGATGATGGAAAATGTTCTGTTCGCCAATATCACGACGGCTAAG--GC 524
BSNT_00035___ 531 AATTA---CAGAAAAATAA 546
.|||| |.||||..||.
BL02370___yaa 525 GATTACCTCCGAAACTTAG 543
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