Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00031 and BL02366
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:41
# Commandline: needle
# -asequence dna-align/BSNT_00031___dck.1.5803.seq
# -bsequence dna-align/BL02366___dck.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00031___dck-BL02366___dck.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00031___dck-BL02366___dck.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00031___dck
# 2: BL02366___dck
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 679
# Identity: 478/679 (70.4%)
# Similarity: 478/679 (70.4%)
# Gaps: 62/679 ( 9.1%)
# Score: 1678.0
#
#
#=======================================
BSNT_00031___ 1 ATGAAGGAACATCATATCCCTAACAATTCAATTATTACAGTAGCAGGAAC 50
||||..|.|.||.||||.||.||..||.|.||.|||||.||.||||||||
BL02366___dck 1 ATGAGTGTATATGATATTCCGAAAGATGCTATCATTACTGTTGCAGGAAC 50
BSNT_00031___ 51 AGTAGGTGTCGGAAAATCGACTTTAACAAA--AACTTTAGCTAAACGGCT 98
.|||||.||.||.|||||.||.||.||||| |.||| ||.|||.||||
BL02366___dck 51 GGTAGGAGTGGGGAAATCCACATTGACAAAAGAGCTT--GCAAAAAGGCT 98
BSNT_00031___ 99 TGGATTTAAAACATCGTTGGAGGAAGTCGATCATAATCCATACTTGGAAA 148
.|||||||||||.||..|.||.||.||||...||||.||.||.|||||..
BL02366___dck 99 CGGATTTAAAACCTCTCTTGAAGAGGTCGTGAATAACCCTTATTTGGAGG 148
BSNT_00031___ 149 AGTTCTATCATGATTTTGAACGTTGGAGCTTTCACCTTCAAATTTACTTC 198
..||.||.||.||.||||||||.||||||||||||||.||.||||.||||
BL02366___dck 149 CTTTTTACCAAGACTTTGAACGCTGGAGCTTTCACCTGCAGATTTTCTTC 198
BSNT_00031___ 199 TTAGCTGAACGCTTCAAAGAACAGAAAACA-ATTTTTGAAGCCGGCGGAG 247
||.||.||.|||||||||||||| ||||.| ||||..|||.|.|||||.|
BL02366___dck 199 TTGGCAGAGCGCTTCAAAGAACA-AAAATACATTTACGAATCGGGCGGCG 247
BSNT_00031___ 248 GTTTTGTACAGGATCGTTCGATTTATGAAGATACAGGAATTTTCGCAAAA 297
|.|||||.|||||.|||||.|||||||||||||||||.||||||||.|||
BL02366___dck 248 GATTTGTTCAGGACCGTTCAATTTATGAAGATACAGGCATTTTCGCCAAA 297
BSNT_00031___ 298 ATGCATGCTGATAAAGGGACAATGTCAAAGGTTGATTATAAGACTTACAC 347
|||||.||.||||||||.|||||||||||.||.||.||||||||.||.||
BL02366___dck 298 ATGCACGCCGATAAAGGCACAATGTCAAAAGTCGACTATAAGACGTATAC 347
BSNT_00031___ 348 AAGCCTTTTCGAAGCAATGGTAATGACACCGTATTTCCCACACCCAGATG 397
.|||||.||.|||||.|||||.|||||.||.||.|||||.|.|||.||.|
BL02366___dck 348 GAGCCTGTTTGAAGCGATGGTCATGACGCCTTACTTCCCCCGCCCCGACG 397
BSNT_00031___ 398 TGTTGATCTATTTAGAAGGAGATCTGGAGAAC-ATTTTAAACCGGATTGA 446
|.||..||||||||||.||.|||.|||| ||| |||.|..||||.||..|
BL02366___dck 398 TTTTAGTCTATTTAGAGGGCGATTTGGA-AACGATTCTCGACCGCATCCA 446
BSNT_00031___ 447 ACAACGCGGCCGTGAGATGGAGCT-TCAGACAAGCAGGTCTTATTGGGAA 495
|.|||||||.||.||.|||||.|| |.| ||...|||.||.|||||||||
BL02366___dck 447 AAAACGCGGACGGGAAATGGAACTGTTA-ACCGACAGATCGTATTGGGAA 495
BSNT_00031___ 496 GAAATGCATACAC--GCTACGAGAACTGGATAAGCGGTTTTAATGCCTGC 543
|||||| ||||| |.||.||.||||||||.|||||.|||||.|||||.
BL02366___dck 496 GAAATG--TACACTAGGTATGAAAACTGGATCAGCGGATTTAACGCCTGT 543
BSNT_00031___ 544 CCTGTTTTAAAACTTCGCATTGAAGATTATGATCTTCTGAACGACGAAAA 593
||.|||.|.|.|.|....|||||.||.||.||.||..|.|||.||..|..
BL02366___dck 544 CCGGTTGTCAGAGTCAATATTGATGAATACGACCTGTTCAACAACTCAGC 593
BSNT_00031___ 594 CTCGATTGAAAATATTGTAGATCAAATTGCTTCAGTTATTCATGATAATC 643
||| |.|.||||.|| |||| |.
BL02366___dck 594 CTC------------TCTCGATCCAA-------------TCAT-----TG 613
BSNT_00031___ 644 AAAAAA--AGTGA---------------- 654
|||||| |||||
BL02366___dck 614 AAAAAATCAGTGAAGCCATTCAAAGATAA 642
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