Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06141 and BL02363

See Amino acid alignment / Visit BSNT_06141 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:07
# Commandline: needle
#    -asequence dna-align/BSNT_06141___yxaA.1.5803.seq
#    -bsequence dna-align/BL02363___glxK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06141___yxaA-BL02363___glxK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06141___yxaA-BL02363___glxK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06141___yxaA
# 2: BL02363___glxK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1281
# Identity:     753/1281 (58.8%)
# Similarity:   753/1281 (58.8%)
# Gaps:         282/1281 (22.0%)
# Score: 2114.0
# 
#
#=======================================

BSNT_06141___      1 ATGAAAATCATCATTGCACCTGATTCTTTTAAGGAAAGCTTATCAGCTCT     50
                     |||||||||.|.||.|||||||||||.|||||.||||||.|..||.|.||
BL02363___glx      1 ATGAAAATCGTAATCGCACCTGATTCATTTAAAGAAAGCATGACATCGCT     50

BSNT_06141___     51 GGAGGCAGC-CGAAGCGATAGAAAGAGGTTTCAAATCGGTCTTTCCGGGT     99
                     .|||||.|| .||||| ||.||||.|||.||.|||..|.|..|.||.|..
BL02363___glx     51 TGAGGCGGCTAGAAGC-ATTGAAAAAGGCTTTAAAGAGATTCTGCCTGAC     99

BSNT_06141___    100 GCTGATTACAG--AAAATTGCCGGTGGCGGATGGCGGCGAGGGAACCGTT    147
                     ||.||.||| |  ||.||| |||||.||.||.||.|||||.|||||||||
BL02363___glx    100 GCCGAATAC-GTCAATATT-CCGGTTGCCGACGGAGGCGAAGGAACCGTT    147

BSNT_06141___    148 CAATCTCTGGTCGATGCGACCAACGGAAGG----ATCATAGAGCAAGTTG    193
                     ||..|||||||.||.||.|||    |.|||    ||..||.|.|||...|
BL02363___glx    148 CAGGCTCTGGTTGACGCTACC----GGAGGAGATATTGTATATCAAACGG    193

BSNT_06141___    194 TCACAGGGCCGCTGGGGGAACCGGT---GAGAGCTTTCTTTGGCATGATG    240
                     ||||.||.||.||.|||.|.||.||   |..|||||.|   |||.||.|.
BL02363___glx    194 TCACTGGCCCTCTCGGGAAGCCCGTAAAGGCAGCTTAC---GGCCTGCTT    240

BSNT_06141___    241 GGAGATGGGAGAACAGCTGTGATTGAAATGGCTGCTGCTTCAGGGCTGCA    290
                     ||.||.||.|.|||.|||||.||.||||||||||..||.|||||.||.||
BL02363___glx    241 GGTGACGGAAAAACGGCTGTCATCGAAATGGCTGAAGCGTCAGGCCTTCA    290

BSNT_06141___    291 TCTGGTGCCTGTAGATAAGCGAAATCCGCTCATCACTACAACAAGGGGAA    340
                     .||.||.||....||..||||.|||||.||..|.||.|||||.||.||||
BL02363___glx    291 CCTCGTTCCACCTGAACAGCGGAATCCCCTGTTAACGACAACGAGAGGAA    340

BSNT_06141___    341 CGGGAGAATTAATCGGAGCAGCTCTTGATGCGGGAGCGG----AGCGATT    386
                     |.|||||..|.||         |||.|||||   .||||    || ||.|
BL02363___glx    341 CCGGAGAGCTGAT---------TCTGGATGC---TGCGGAAAAAG-GAGT    377

BSNT_06141___    387 G---------ATCATCGGAATCGGCGGAAGCGCCACGAACGACGGGGGAG    427
                     |         |||||||||.|||||||||||||.||.||.|||||.||.|
BL02363___glx    378 GTCCCAGATCATCATCGGACTCGGCGGAAGCGCGACAAATGACGGCGGCG    427

BSNT_06141___    428 CCGGGAT-GATTCAGGCATTGGGCG-GAAGGCTT-----------CTTGA    464
                     |.||.|| |.|||| |||.|.|||| ||||  ||           ||.||
BL02363___glx    428 CGGGAATGGCTTCA-GCACTTGGCGTGAAG--TTTCTAAACCGCGCTGGA    474

BSNT_06141___    465 TAACTCAGGCAGCGAGATTGGCCCA----GGGGGCGGCGCGTTATCTCAG    510
                     .||          |||||||    |    ||||||||.||..||.||.||
BL02363___glx    475 GAA----------GAGATTG----AAAATGGGGGCGGTGCACTAGCTGAG    510

BSNT_06141___    511 CTTGCATCAATAGATGTTGGCGGGCTTGATTCCAGATTGCGGAATGTCAA    560
                     .||||...|||.|||||..||||.||||||.|.|.|||...|.||.||.|
BL02363___glx    511 ATTGCCAAAATCGATGTGAGCGGCCTTGATCCAAAATTAAAGCATATCCA    560

BSNT_06141___    561 ACTGGAAGTTGCCTGTGACGTGGACAATCCGTTAACAGGACCAAAGGGTG    610
                     |.|.||||..||||||||.||.||.|||||..|.|||||.||....||||
BL02363___glx    561 ATTCGAAGCCGCCTGTGATGTTGATAATCCTCTTACAGGTCCTCGCGGTG    610

BSNT_06141___    611 CTACGGCTGTTTTCGGACCGCAAAAAGGCGC------------GACGGCC    648
                     |..|.|||||.||.||.|||||||||||.||            |||||||
BL02363___glx    611 CCTCCGCTGTATTTGGGCCGCAAAAAGGAGCGAACAGTGAAATGACGGCC    660

BSNT_06141___    649 GACATGCTGGATGTACTAGAACAGAACGTAAACCATTTCGCTG-ATATGA    697
                     .||.||            ||.||.|||.||||.||||..|||| |..||.
BL02363___glx    661 CACTTG------------GATCAAAACTTAAAACATTATGCTGCAGCTGT    698

BSNT_06141___    698 CAGAAAAAGAGCTCGGATCAACCTTCCGA----GATACA---GAGGGCGC    740
                     || ||..||||||.|||       |.|||    |||.||   ..|||.||
BL02363___glx    699 CA-AAGCAGAGCTGGGA-------TGCGAAATCGATTCACTCCCGGGAGC    740

BSNT_06141___    741 CGGTGCAGCGGGCGGTCTTGGAT--GGAGC------CTGCTGACTTATTT    782
                     |||   |||||.|||   .||||  |||||      .||| |.||| |||
BL02363___glx    741 CGG---AGCGGCCGG---AGGATTGGGAGCTGGCCTGTGC-GCCTT-TTT    782

BSNT_06141___    783 TCAGGCTGACCTGAAAAGAGGCATTGATATTGTCCTTGAAGCGGTTGAT-    831
                     ..|.||.||..|.|||||.||..||||.|||||  ||       |.||| 
BL02363___glx    783 AAAAGCGGAATTAAAAAGCGGTGTTGACATTGT--TT-------TAGATA    823

BSNT_06141___    832 -TTTGAAAATATCGTTCAGGATGCA-----------GATCTTGTGATTAC    869
                      ||||    |.|..|||.|.|.|||           ||||||||.|||||
BL02363___glx    824 CTTTG----TCTTTTTCTGAACGCATTAAAGGGGCCGATCTTGTAATTAC    869

BSNT_06141___    870 CGGCGAGGGAAGGATCGACAGCCAAACGGTTCA-TGGAAAAACGCCGATC    918
                     .||||||||||..||.|||.||||||||| ||| .||||||||||||..|
BL02363___glx    870 AGGCGAGGGAAAAATAGACGGCCAAACGG-TCAGCGGAAAAACGCCGGCC    918

BSNT_06141___    919 GGCGTAGCCAA-------GGCGGCTAAATCATATGATGTGCCCGTCATCG    961
                     |||||.||.||       .||.||.|||       ||.|.||.||.||.|
BL02363___glx    919 GGCGTCGCAAAACGCGCCTGCAGCGAAA-------ATATTCCGGTTATTG    961

BSNT_06141___    962 GTATTGCGGGATCAGTATCACGAGACAGTGATGCC---------GTCTAT   1002
                     ...||||.|||||..|         |.||||.|.|         ||.|||
BL02363___glx    962 CATTTGCCGGATCGCT---------CGGTGAAGGCTGCGAGCTTGTTTAT   1002

BSNT_06141___   1003 CAACACGGAAT---CGATGCGCTTTTCAGCATCGTTCCCGG----AGC--   1043
                     .|...|||.||   ||.| |.||||||  .|||||.|||||    |||  
BL02363___glx   1003 GATATCGGCATTTCCGCT-CTCTTTTC--GATCGTGCCCGGCATCAGCTC   1049

BSNT_06141___   1044 -------------CGTGCCGCTAGAAG----------ACGCG-TTTGAAC   1069
                                  |.|||||.|.||||          ||||| |.||   
BL02363___glx   1050 CTTGGAGAACGCTCTTGCCGATGGAAGTTCAAATCTTACGCGCTGTG---   1096

BSNT_06141___   1070 ATGCCGCGGAATATATGGAAAGAACGGCG-CGGGACATTGCAGCGACTAT   1118
                         ||||.|||.||       ..||.|| |.||.||.|    |||.||.
BL02363___glx   1097 ----CGCGAAATGTA-------GCCGCCGTCTGGTCACT----CGAATAA   1131

BSNT_06141___   1119 CAAATTGGCGAAAACGATGTTTCTGATATAG   1149
                                                    
BL02363___glx   1131 -------------------------------   1131


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