Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06141 and BL02363
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:07
# Commandline: needle
# -asequence dna-align/BSNT_06141___yxaA.1.5803.seq
# -bsequence dna-align/BL02363___glxK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06141___yxaA-BL02363___glxK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06141___yxaA-BL02363___glxK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06141___yxaA
# 2: BL02363___glxK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1281
# Identity: 753/1281 (58.8%)
# Similarity: 753/1281 (58.8%)
# Gaps: 282/1281 (22.0%)
# Score: 2114.0
#
#
#=======================================
BSNT_06141___ 1 ATGAAAATCATCATTGCACCTGATTCTTTTAAGGAAAGCTTATCAGCTCT 50
|||||||||.|.||.|||||||||||.|||||.||||||.|..||.|.||
BL02363___glx 1 ATGAAAATCGTAATCGCACCTGATTCATTTAAAGAAAGCATGACATCGCT 50
BSNT_06141___ 51 GGAGGCAGC-CGAAGCGATAGAAAGAGGTTTCAAATCGGTCTTTCCGGGT 99
.|||||.|| .||||| ||.||||.|||.||.|||..|.|..|.||.|..
BL02363___glx 51 TGAGGCGGCTAGAAGC-ATTGAAAAAGGCTTTAAAGAGATTCTGCCTGAC 99
BSNT_06141___ 100 GCTGATTACAG--AAAATTGCCGGTGGCGGATGGCGGCGAGGGAACCGTT 147
||.||.||| | ||.||| |||||.||.||.||.|||||.|||||||||
BL02363___glx 100 GCCGAATAC-GTCAATATT-CCGGTTGCCGACGGAGGCGAAGGAACCGTT 147
BSNT_06141___ 148 CAATCTCTGGTCGATGCGACCAACGGAAGG----ATCATAGAGCAAGTTG 193
||..|||||||.||.||.||| |.||| ||..||.|.|||...|
BL02363___glx 148 CAGGCTCTGGTTGACGCTACC----GGAGGAGATATTGTATATCAAACGG 193
BSNT_06141___ 194 TCACAGGGCCGCTGGGGGAACCGGT---GAGAGCTTTCTTTGGCATGATG 240
||||.||.||.||.|||.|.||.|| |..|||||.| |||.||.|.
BL02363___glx 194 TCACTGGCCCTCTCGGGAAGCCCGTAAAGGCAGCTTAC---GGCCTGCTT 240
BSNT_06141___ 241 GGAGATGGGAGAACAGCTGTGATTGAAATGGCTGCTGCTTCAGGGCTGCA 290
||.||.||.|.|||.|||||.||.||||||||||..||.|||||.||.||
BL02363___glx 241 GGTGACGGAAAAACGGCTGTCATCGAAATGGCTGAAGCGTCAGGCCTTCA 290
BSNT_06141___ 291 TCTGGTGCCTGTAGATAAGCGAAATCCGCTCATCACTACAACAAGGGGAA 340
.||.||.||....||..||||.|||||.||..|.||.|||||.||.||||
BL02363___glx 291 CCTCGTTCCACCTGAACAGCGGAATCCCCTGTTAACGACAACGAGAGGAA 340
BSNT_06141___ 341 CGGGAGAATTAATCGGAGCAGCTCTTGATGCGGGAGCGG----AGCGATT 386
|.|||||..|.|| |||.||||| .|||| || ||.|
BL02363___glx 341 CCGGAGAGCTGAT---------TCTGGATGC---TGCGGAAAAAG-GAGT 377
BSNT_06141___ 387 G---------ATCATCGGAATCGGCGGAAGCGCCACGAACGACGGGGGAG 427
| |||||||||.|||||||||||||.||.||.|||||.||.|
BL02363___glx 378 GTCCCAGATCATCATCGGACTCGGCGGAAGCGCGACAAATGACGGCGGCG 427
BSNT_06141___ 428 CCGGGAT-GATTCAGGCATTGGGCG-GAAGGCTT-----------CTTGA 464
|.||.|| |.|||| |||.|.|||| |||| || ||.||
BL02363___glx 428 CGGGAATGGCTTCA-GCACTTGGCGTGAAG--TTTCTAAACCGCGCTGGA 474
BSNT_06141___ 465 TAACTCAGGCAGCGAGATTGGCCCA----GGGGGCGGCGCGTTATCTCAG 510
.|| ||||||| | ||||||||.||..||.||.||
BL02363___glx 475 GAA----------GAGATTG----AAAATGGGGGCGGTGCACTAGCTGAG 510
BSNT_06141___ 511 CTTGCATCAATAGATGTTGGCGGGCTTGATTCCAGATTGCGGAATGTCAA 560
.||||...|||.|||||..||||.||||||.|.|.|||...|.||.||.|
BL02363___glx 511 ATTGCCAAAATCGATGTGAGCGGCCTTGATCCAAAATTAAAGCATATCCA 560
BSNT_06141___ 561 ACTGGAAGTTGCCTGTGACGTGGACAATCCGTTAACAGGACCAAAGGGTG 610
|.|.||||..||||||||.||.||.|||||..|.|||||.||....||||
BL02363___glx 561 ATTCGAAGCCGCCTGTGATGTTGATAATCCTCTTACAGGTCCTCGCGGTG 610
BSNT_06141___ 611 CTACGGCTGTTTTCGGACCGCAAAAAGGCGC------------GACGGCC 648
|..|.|||||.||.||.|||||||||||.|| |||||||
BL02363___glx 611 CCTCCGCTGTATTTGGGCCGCAAAAAGGAGCGAACAGTGAAATGACGGCC 660
BSNT_06141___ 649 GACATGCTGGATGTACTAGAACAGAACGTAAACCATTTCGCTG-ATATGA 697
.||.|| ||.||.|||.||||.||||..|||| |..||.
BL02363___glx 661 CACTTG------------GATCAAAACTTAAAACATTATGCTGCAGCTGT 698
BSNT_06141___ 698 CAGAAAAAGAGCTCGGATCAACCTTCCGA----GATACA---GAGGGCGC 740
|| ||..||||||.||| |.||| |||.|| ..|||.||
BL02363___glx 699 CA-AAGCAGAGCTGGGA-------TGCGAAATCGATTCACTCCCGGGAGC 740
BSNT_06141___ 741 CGGTGCAGCGGGCGGTCTTGGAT--GGAGC------CTGCTGACTTATTT 782
||| |||||.||| .|||| ||||| .||| |.||| |||
BL02363___glx 741 CGG---AGCGGCCGG---AGGATTGGGAGCTGGCCTGTGC-GCCTT-TTT 782
BSNT_06141___ 783 TCAGGCTGACCTGAAAAGAGGCATTGATATTGTCCTTGAAGCGGTTGAT- 831
..|.||.||..|.|||||.||..||||.||||| || |.|||
BL02363___glx 783 AAAAGCGGAATTAAAAAGCGGTGTTGACATTGT--TT-------TAGATA 823
BSNT_06141___ 832 -TTTGAAAATATCGTTCAGGATGCA-----------GATCTTGTGATTAC 869
|||| |.|..|||.|.|.||| ||||||||.|||||
BL02363___glx 824 CTTTG----TCTTTTTCTGAACGCATTAAAGGGGCCGATCTTGTAATTAC 869
BSNT_06141___ 870 CGGCGAGGGAAGGATCGACAGCCAAACGGTTCA-TGGAAAAACGCCGATC 918
.||||||||||..||.|||.||||||||| ||| .||||||||||||..|
BL02363___glx 870 AGGCGAGGGAAAAATAGACGGCCAAACGG-TCAGCGGAAAAACGCCGGCC 918
BSNT_06141___ 919 GGCGTAGCCAA-------GGCGGCTAAATCATATGATGTGCCCGTCATCG 961
|||||.||.|| .||.||.||| ||.|.||.||.||.|
BL02363___glx 919 GGCGTCGCAAAACGCGCCTGCAGCGAAA-------ATATTCCGGTTATTG 961
BSNT_06141___ 962 GTATTGCGGGATCAGTATCACGAGACAGTGATGCC---------GTCTAT 1002
...||||.|||||..| |.||||.|.| ||.|||
BL02363___glx 962 CATTTGCCGGATCGCT---------CGGTGAAGGCTGCGAGCTTGTTTAT 1002
BSNT_06141___ 1003 CAACACGGAAT---CGATGCGCTTTTCAGCATCGTTCCCGG----AGC-- 1043
.|...|||.|| ||.| |.|||||| .|||||.||||| |||
BL02363___glx 1003 GATATCGGCATTTCCGCT-CTCTTTTC--GATCGTGCCCGGCATCAGCTC 1049
BSNT_06141___ 1044 -------------CGTGCCGCTAGAAG----------ACGCG-TTTGAAC 1069
|.|||||.|.|||| ||||| |.||
BL02363___glx 1050 CTTGGAGAACGCTCTTGCCGATGGAAGTTCAAATCTTACGCGCTGTG--- 1096
BSNT_06141___ 1070 ATGCCGCGGAATATATGGAAAGAACGGCG-CGGGACATTGCAGCGACTAT 1118
||||.|||.|| ..||.|| |.||.||.| |||.||.
BL02363___glx 1097 ----CGCGAAATGTA-------GCCGCCGTCTGGTCACT----CGAATAA 1131
BSNT_06141___ 1119 CAAATTGGCGAAAACGATGTTTCTGATATAG 1149
BL02363___glx 1131 ------------------------------- 1131
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