Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00043 and BL02361

See Amino acid alignment / Visit BSNT_00043 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:42
# Commandline: needle
#    -asequence dna-align/BSNT_00043___bofA.1.5803.seq
#    -bsequence dna-align/BL02361___bofA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00043___bofA-BL02361___bofA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00043___bofA-BL02361___bofA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00043___bofA
# 2: BL02361___bofA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 280
# Identity:     186/280 (66.4%)
# Similarity:   186/280 (66.4%)
# Gaps:          29/280 (10.4%)
# Score: 570.0
# 
#
#=======================================

BSNT_00043___      1 ATGGAGCCTATTTTTATTATTGGGATTATTTTAGGATTGGTT--ATTCTT     48
                     ||||...||.||.|..||||.|||...|||.|||..||||||  ..|.||
BL02361___bof      1 ATGGGATCTGTTATCTTTATCGGGGCAATTGTAGCTTTGGTTGCCCTGTT     50

BSNT_00043___     49 CTTTTTTT-------ATCAGGTTCAGC---TGCGAAGCCTTTAAAGTGGA     88
                     .|||||||       |||| .||.|||   |||||     |||      |
BL02361___bof     51 GTTTTTTTCAAAAGCATCA-TTTAAGCCTTTGCGA-----TTA------A     88

BSNT_00043___     89 TTGGCATCACAGCTGTTAAATTTGTGGCAGGTGCTTTGCTGCTGGTTTGT    138
                     |.||.|..|.|||.||||.||||||.|..||.||||||.|..||.|.|||
BL02361___bof     89 TCGGAAGAATAGCGGTTAGATTTGTAGTCGGCGCTTTGTTTTTGTTCTGT    138

BSNT_00043___    139 GTAAATATGTTTGGCGGCAGTCTTGGCATTCATGTGCCGATTAATCTGGT    188
                     ||.|||.|||||||||..||..|.||||||||.||||||||||||.|.||
BL02361___bof    139 GTGAATCTGTTTGGCGAGAGCGTGGGCATTCACGTGCCGATTAATATTGT    188

BSNT_00043___    189 TACAACAGCTATCAGCGGAATTTTAGGGATACCCGGAATAGCTGC-GTTA    237
                     .|||||.|...|.||||||.|.||.|||.|.|||||..||||.|| .|||
BL02361___bof    189 AACAACCGGAGTGAGCGGATTATTGGGGGTTCCCGGTGTAGCAGCTCTTA    238

BSNT_00043___    238 GTCGTTATTAAGCAATTTATC---ATTTAA    264
                      |.||.|||||.|||||||||   ||.|||
BL02361___bof    239 -TTGTCATTAAACAATTTATCGCAATATAA    267


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