Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00041 and BL02359

See Amino acid alignment / Visit BSNT_00041 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:42
# Commandline: needle
#    -asequence dna-align/BSNT_00041___recR.1.5803.seq
#    -bsequence dna-align/BL02359___recR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00041___recR-BL02359___recR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00041___recR-BL02359___recR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00041___recR
# 2: BL02359___recR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 597
# Identity:     506/597 (84.8%)
# Similarity:   506/597 (84.8%)
# Gaps:           0/597 ( 0.0%)
# Score: 2166.0
# 
#
#=======================================

BSNT_00041___      1 ATGCAATATCCTGAACCAATATCAAAGCTGATTGACAGCTTTATGAAATT     50
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BL02359___rec      1 ATGCAGTATCCTGAACCAATATCAAAGCTGATTGACAGCTTTATGAAATT     50

BSNT_00041___     51 GCCAGGGATCGGACCGAAAACAGCGGTTCGTCTGGCTTTTTTTGTTCTAG    100
                     ||||||.||||||||.||.||.|||||.||||||||||||||||||||..
BL02359___rec     51 GCCAGGAATCGGACCCAAGACGGCGGTCCGTCTGGCTTTTTTTGTTCTTA    100

BSNT_00041___    101 GTATGAAAGAAGATGTAGTATTAGATTTTGCGAAAGCATTAGTAAATGCG    150
                     |||||||||||||.||.||.|||||||||||.||||||||.|||||.||.
BL02359___rec    101 GTATGAAAGAAGACGTCGTGTTAGATTTTGCAAAAGCATTGGTAAACGCA    150

BSNT_00041___    151 AAACGCAACCTGACATATTGTTCAGTTTGCGGGCATATTACAGATCAGGA    200
                     ||.|||||..||||||||||.||.||.|||||.|||||.||||||||.||
BL02359___rec    151 AAGCGCAATTTGACATATTGCTCGGTCTGCGGACATATAACAGATCAAGA    200

BSNT_00041___    201 CCCTTGCTATATATGTGAAGATACGCGCAGGGATAAGTCTGTTATCTGTG    250
                     .|||||||||||.||||||||||||.|.||.||.||.||.||.||.||||
BL02359___rec    201 TCCTTGCTATATTTGTGAAGATACGAGAAGAGACAAATCGGTCATATGTG    250

BSNT_00041___    251 TTGTGCAAGACCCTAAGGATGTTATCGCTATGGAGAAAATGAAGGAATAC    300
                     ||||.||.||.||.||.|||||.||.||||||||||||||||||||.|||
BL02359___rec    251 TTGTTCAGGATCCCAAAGATGTCATTGCTATGGAGAAAATGAAGGAGTAC    300

BSNT_00041___    301 AACGGACAGTATCACGTTCTTCACGGCGCTATTTCTCCAATGGACGGCAT    350
                     |||||||.|||.||.|||.|.||.||.||.||||||||.|||||||||||
BL02359___rec    301 AACGGACTGTACCATGTTTTGCATGGAGCGATTTCTCCGATGGACGGCAT    350

BSNT_00041___    351 TGGACCGGAGGATATTAAAATACCAGAATTGTTAAAACGATTACAGGATG    400
                     .||.|||||.||||||||||||||.||||||.|.||.||.||.|||||||
BL02359___rec    351 CGGTCCGGAAGATATTAAAATACCCGAATTGCTGAAGCGGTTGCAGGATG    400

BSNT_00041___    401 ATCAAGTGACAGAAGTGATCCTCGCGACAAACCCTAATATAGAAGGGGAA    450
                     ||||.|||||.|||||.||.||||||||||||||.|||||||||||.|||
BL02359___rec    401 ATCAGGTGACTGAAGTCATTCTCGCGACAAACCCGAATATAGAAGGAGAA    450

BSNT_00041___    451 GCAACGGCGATGTATATATCAAGGCTCCTCAAGCCGTCTGGTATTAAGCT    500
                     ||||||||.|||||.||.||||||||..|.||||||||||||||.|||||
BL02359___rec    451 GCAACGGCCATGTACATTTCAAGGCTTTTAAAGCCGTCTGGTATCAAGCT    500

BSNT_00041___    501 CTCCCGTATTGCCCACGGACTGCCCGTCGGCGGTGACTTGGAATATGCTG    550
                     .||.||.||||||||.|||||.||.|||||.||.||.|||||.|||||.|
BL02359___rec    501 GTCACGAATTGCCCATGGACTTCCGGTCGGAGGCGATTTGGAGTATGCAG    550

BSNT_00041___    551 ACGAGGTCACTCTTTCTAAAGCACTTGAAGGAAGACGCGAATTGTAA    597
                     |.||.|||||||||||||||||.||||||||.|||||.|||.||||.
BL02359___rec    551 ATGAAGTCACTCTTTCTAAAGCGCTTGAAGGCAGACGTGAAATGTAG    597


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