Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00040 and BL02358

See Amino acid alignment / Visit BSNT_00040 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:42
# Commandline: needle
#    -asequence dna-align/BSNT_00040___yaaK.1.5803.seq
#    -bsequence dna-align/BL02358___yaaK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00040___yaaK-BL02358___yaaK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00040___yaaK-BL02358___yaaK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00040___yaaK
# 2: BL02358___yaaK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 324
# Identity:     253/324 (78.1%)
# Similarity:   253/324 (78.1%)
# Gaps:          21/324 ( 6.5%)
# Score: 1065.0
# 
#
#=======================================

BSNT_00040___      1 ---------------------ATGCAAAAAATGATGAAACAAATGCAAAA     29
                                          |||||.|||||||||||.|||||||||||
BL02358___yaa      1 ATGCGCGGTGGAATGGGTAACATGCAGAAAATGATGAAGCAAATGCAAAA     50

BSNT_00040___     30 AATGCAAAAGGACATGGCGAAGGCTCAAGAAGAGCTTGCAGAAAAGGTTG     79
                     ||||||||||||.|||...|||||.||.||.|||||.||.|||||.||..
BL02358___yaa     51 AATGCAAAAGGATATGCAAAAGGCACAGGAGGAGCTGGCTGAAAAAGTAC    100

BSNT_00040___     80 TTGAAGGAACTGCAGGCGGCGGTATGGTAACAGTAAAAGCAAACGGCCAA    129
                     |.|||||.|||||||||||.||.|||||.||.||.||.|..|||||||||
BL02358___yaa    101 TCGAAGGTACTGCAGGCGGTGGAATGGTGACCGTTAAGGTGAACGGCCAA    150

BSNT_00040___    130 AAAGAAATCCTGGATGTTATCATCAAAGAAGAAGTCGTTGATCCTGAAGA    179
                     ||||||.||.|.||.||.|||||||||||.||||||||.||.||||||||
BL02358___yaa    151 AAAGAAGTCATCGACGTCATCATCAAAGAGGAAGTCGTAGACCCTGAAGA    200

BSNT_00040___    180 TATTGATATGCTTCAAGATTTAGTGCTTGCTGCAACGAATGAAGCTTTGA    229
                     |.||||.||||||||||||.|.||.|||||.||.||.||.||.|||||||
BL02358___yaa    201 TGTTGAAATGCTTCAAGATCTTGTTCTTGCAGCGACAAACGATGCTTTGA    250

BSNT_00040___    230 AAAAAGTTGACGAAATCACAAACGAAACAATGGGTCAATTTACAAAGGGA    279
                     ||||||||||||||.|.|||||.|||||.||||||.|.||||||||.|||
BL02358___yaa    251 AAAAAGTTGACGAAGTAACAAATGAAACGATGGGTAAGTTTACAAAAGGA    300

BSNT_00040___    280 ATGAACATGCCAGGTTTATTCTAG    303
                     |||||||||||.||||||||||||
BL02358___yaa    301 ATGAACATGCCGGGTTTATTCTAG    324


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