Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00027 and BL02355
See
Amino acid alignment /
Visit
BSNT_00027 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:41
# Commandline: needle
# -asequence dna-align/BSNT_00027___serS.1.5803.seq
# -bsequence dna-align/BL02355___serS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00027___serS-BL02355___serS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00027___serS-BL02355___serS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00027___serS
# 2: BL02355___serS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1339
# Identity: 1040/1339 (77.7%)
# Similarity: 1040/1339 (77.7%)
# Gaps: 65/1339 ( 4.9%)
# Score: 4203.0
#
#
#=======================================
BSNT_00027___ 1 ATGGGGATGAGGGCTCTTTTTATTTTCGACAAATCAATAAAAAAAGGAGT 50
BL02355___ser 0 -------------------------------------------------- 0
BSNT_00027___ 51 GTTTCGCATGCTTGATACGAAAATGCTGAGAGCAAATTTTCAAGAAATTA 100
|||||||||...|||.|||||.|.|||||||||.|||||||.|
BL02355___ser 1 -------ATGCTTGATGTCAAACTGCTGCGGGCAAATTTTGAAGAAATCA 43
BSNT_00027___ 101 AAGCAAAGCTTGTACACAAAGGCGAAGACTTAACTGATTTTGATAAGTTT 150
||..||||||||..||||..||.|||||.|||.|.|||||||||.|.|||
BL02355___ser 44 AACAAAAGCTTGCCCACAGGGGAGAAGATTTATCAGATTTTGATCAATTT 93
BSNT_00027___ 151 GAGGCGCTGGAT-GATAGACGAAGAGAGCTTATCGGCAAGGTTGAAGAGT 199
||||...||||| .|.||| |||||||..|.||||.|||.||.||||||.
BL02355___ser 94 GAGGAATTGGATACAAAGA-GAAGAGAATTGATCGTCAAAGTGGAAGAGC 142
BSNT_00027___ 200 TAAAAGGAAAACGAAATGAAGTTTCTCAGCAGGTTGCTGTGCTGAAGCGT 249
|.|||||.||.||.|||||.||.||||||||||||||.|...|.|||||.
BL02355___ser 143 TGAAAGGGAAGCGCAATGAGGTATCTCAGCAGGTTGCCGCTTTAAAGCGC 192
BSNT_00027___ 250 GAGAAAAAAGAAGCGGATCACATTATTAAAGAAATGCGTGAAGTCGGCGA 299
|||||||||||.||.||.|||.|.||||||||||||||.||||||||.||
BL02355___ser 193 GAGAAAAAAGATGCTGACCACCTCATTAAAGAAATGCGCGAAGTCGGTGA 242
BSNT_00027___ 300 GGAAATTAAAAAGCTTGATGAAGAATTGCGAACAGTGGAAGCTGAGCTTG 349
.||.||||||||.|||||||||||..||.||||.||.||..||..|||||
BL02355___ser 243 AGACATTAAAAAACTTGATGAAGAGCTGAGAACGGTCGAGTCTTCGCTTG 292
BSNT_00027___ 350 ATACAATCCTTCTCTCAATCCCGAATATTCCGCATGAGTCTGTACCTGTC 399
|||.||||.|..|.||.||||||||.||.||.||.||||||||.||.|||
BL02355___ser 293 ATAAAATCATGTTGTCTATCCCGAACATCCCCCACGAGTCTGTTCCGGTC 342
BSNT_00027___ 400 GGTGAAACAGAAGACGACAACGTAGAAGTGCGTAAATGGGGTGAAAAGCC 449
|||||.||.||||||||||||||.|||||.||.||||||||.|||...||
BL02355___ser 343 GGTGAGACTGAAGACGACAACGTGGAAGTTCGCAAATGGGGCGAACTCCC 392
BSNT_00027___ 450 TTCATTTGCTTATGAGCCGAAGCCGCACTGGGATATTGCGGATGAGCTGG 499
|...|||.|.|.||||||||||||.||.|||||||||||.|||.|..|||
BL02355___ser 393 TGAGTTTTCGTTTGAGCCGAAGCCTCATTGGGATATTGCCGATCAATTGG 442
BSNT_00027___ 500 GTATTCTGGATTTTGAACGTGCTGCCAAAGTAACAGGAAGCCGTTTCGTG 549
.||||||.|||||||||||.||.|.|||.|||||.||||||||||||||.
BL02355___ser 443 ATATTCTCGATTTTGAACGGGCCGGCAAGGTAACGGGAAGCCGTTTCGTT 492
BSNT_00027___ 550 TTCTATAAAGGCTTAGGTGCTCGTCTGGAGCGTGCGCTTTATAACTTTAT 599
|||||||||||..|.||.||..|.||.||.||.||..|.|||||||||||
BL02355___ser 493 TTCTATAAAGGGCTCGGCGCCAGACTTGAACGCGCATTGTATAACTTTAT 542
BSNT_00027___ 600 GCTTGATCTGCATGTGGATGAGTATAACTACACTGAAGTGATCCCGCCAT 649
|||||||||.||.||.||.|||||...|||.||.|||||.||||||||.|
BL02355___ser 543 GCTTGATCTCCACGTAGACGAGTACGGCTATACGGAAGTCATCCCGCCGT 592
BSNT_00027___ 650 ATATGGTAAACCGCGCAAGCATGACGGGAACGGGGCAGCTTCCTAAATTT 699
|.|||||.|||||||||||||||||.||.||.||.|||||.||.||.|||
BL02355___ser 593 ACATGGTGAACCGCGCAAGCATGACAGGCACCGGACAGCTGCCGAAGTTT 642
BSNT_00027___ 700 GAAGAGGATGCATTTAAAATCAGAGAAGAAGATTATTTCTTAATTCCAAC 749
||.||.|||||.|||||.|||||.|||||||||||||||||||||||.||
BL02355___ser 643 GAGGAAGATGCTTTTAAGATCAGGGAAGAAGATTATTTCTTAATTCCGAC 692
BSNT_00027___ 750 GGCGGAAGTGCCGATTACAAACATGCATCGCGATGAAATCCTTTCAGGTG 799
||||||||||||||||||.|||.||||||||||||||||..|.||||.||
BL02355___ser 693 GGCGGAAGTGCCGATTACGAACCTGCATCGCGATGAAATTTTGTCAGCTG 742
BSNT_00027___ 800 AC-AGCCTGCCGATCAACTATGCGGCATTCAGTGCTTGCTTCCGTTCTGA 848
|| || |||||||||||.||||||||.||||||||.|||||||||||.||
BL02355___ser 743 ACGAG-CTGCCGATCAATTATGCGGCGTTCAGTGCGTGCTTCCGTTCAGA 791
BSNT_00027___ 849 AGCTGGTTCAGCAGGACGTGACACACGCGGATTAATTCGTCAGCACCAAT 898
|||.||.||.||.||||||||.||.|||||.||.|||||.||||||||||
BL02355___ser 792 AGCAGGCTCTGCCGGACGTGATACGCGCGGTTTGATTCGCCAGCACCAAT 841
BSNT_00027___ 899 TTAATAAAGTTGAGCTTGTAAAGTTTGTGAAGCCTGAAGATTCTTATGAA 948
||||.||.|||||.||.||.||.||||||||||||||.|||||.||||||
BL02355___ser 842 TTAACAAGGTTGAACTGGTGAAATTTGTGAAGCCTGAGGATTCATATGAA 891
BSNT_00027___ 949 GAATTAGAGAAGCTTACAAACCAAGC--AGAACGGGTTCTTCAGCTGCTT 996
||..|.||.||.||.|||||.||||| |||| ||||||||||||||||
BL02355___ser 892 GAGCTTGAAAAACTGACAAATCAAGCGGAGAA--GGTTCTTCAGCTGCTT 939
BSNT_00027___ 997 GAGCTTCCATACCGTGTCATGAGCATGTGTACGGGTGATTTAGGCTTTAC 1046
||||||||.||.||.||.|||||||||||||||||.|||.|.||.|||||
BL02355___ser 940 GAGCTTCCTTATCGGGTGATGAGCATGTGTACGGGCGATCTGGGGTTTAC 989
BSNT_00027___ 1047 GGCTGCGAAAAAATACGATATCGAAGTTTGGATTCCAAGCCAAGACACAT 1096
.||||||||||||||||||||.|||||.|||||||||||||||.||||||
BL02355___ser 990 CGCTGCGAAAAAATACGATATTGAAGTATGGATTCCAAGCCAAAACACAT 1039
BSNT_00027___ 1097 ATCGAGAAATCTCTTCTTGCAGCAACTTCGAAGCGTTCCAGGCGAGACGT 1146
||||.|||||.||.||.|||||||||||.|||||.||||||||.|||||.
BL02355___ser 1040 ATCGCGAAATTTCATCATGCAGCAACTTTGAAGCTTTCCAGGCCAGACGG 1089
BSNT_00027___ 1147 GCGAATATTCGATTCAGACGTGAAGCGAAAGGCAAGCCTGAGCATGTACA 1196
||||||||..||||||||.|.|||||.|||||||||||.||||||||.||
BL02355___ser 1090 GCGAATATCAGATTCAGAAGGGAAGCAAAAGGCAAGCCAGAGCATGTCCA 1139
BSNT_00027___ 1197 CACACTGAACGGTTCAGGACTGGCGGTTGGAAGAACAGTTGCCGCTATCT 1246
.||.||.|||||.||.||..||||.||.||.|||||.||||||||..|.|
BL02355___ser 1140 TACGCTAAACGGATCCGGCTTGGCAGTCGGCAGAACGGTTGCCGCATTAT 1189
BSNT_00027___ 1247 TAGAAAATTATCAGCAGGAAGACGGAAGCGTTGTGATTCCGAAAGTGCTT 1296
|.|||||||||||||||||.|||||||||||..|.||.||.||||.||||
BL02355___ser 1190 TGGAAAATTATCAGCAGGAGGACGGAAGCGTCATCATCCCTAAAGCGCTT 1239
BSNT_00027___ 1297 CGTCCTTATATGGGGAATAGAGAAGTAATGAAACCGTAA 1335
|||||.||.||||||||.|||||.||.||..||||.|||
BL02355___ser 1240 CGTCCATACATGGGGAACAGAGACGTTATTCAACCATAA 1278
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.