Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00024 and BL02353
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:41
# Commandline: needle
# -asequence dna-align/BSNT_00024___yaaD.1.5803.seq
# -bsequence dna-align/BL02353___pdxS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00024___yaaD-BL02353___pdxS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00024___yaaD-BL02353___pdxS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00024___yaaD
# 2: BL02353___pdxS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 889
# Identity: 736/889 (82.8%)
# Similarity: 736/889 (82.8%)
# Gaps: 8/889 ( 0.9%)
# Score: 3077.0
#
#
#=======================================
BSNT_00024___ 1 ATGGCTCAAACAGGTACTGAACGTGTAAAACGCGGAATGGCAGAAATGCA 50
||||||||||||||||||||.||.|||||||||||.||||||||||||||
BL02353___pdx 1 ATGGCTCAAACAGGTACTGATCGCGTAAAACGCGGTATGGCAGAAATGCA 50
BSNT_00024___ 51 AAAAGGCGGCGTCATCATGGACGTCATCAATGCGGAACAAGCGAAAATCG 100
.||.|||||||||||.||||||||..|||||||.||||||||.|||||||
BL02353___pdx 51 GAAGGGCGGCGTCATTATGGACGTTGTCAATGCTGAACAAGCAAAAATCG 100
BSNT_00024___ 101 CTGAAGAAGCTGGAGCTGTCGCTGTAATGGCGCTAGAACGTGTGCCGGCA 150
|.||||||||.|||||.|||||.||.||||||||.||.||.||.|||||.
BL02353___pdx 101 CAGAAGAAGCAGGAGCCGTCGCAGTCATGGCGCTGGAGCGCGTTCCGGCT 150
BSNT_00024___ 151 GATATTCGCGCGGCTGGAGGAGTTGCCCGTATGGCTGACCCTACAATCGT 200
|||||.||.|||||.||.|||||||||||.|||||.||.||.||.||.||
BL02353___pdx 151 GATATCCGTGCGGCAGGCGGAGTTGCCCGCATGGCAGATCCGACTATTGT 200
BSNT_00024___ 201 GGAAGAAGTAATGAATGCAGTATCTATCCCTGTAATGGCAAAAGCGCGTA 250
.||||||||.|||||.||.||.||.|||||.||.|||||||||||.||.|
BL02353___pdx 201 CGAAGAAGTGATGAACGCTGTTTCAATCCCGGTTATGGCAAAAGCACGCA 250
BSNT_00024___ 251 TCGGACATGTTGTTGAAGCGCGTGTGCTTGAAGCTATGGGTGTTGACTAT 300
||||.|||.|.||||||||||||||.||||||||..|.||.|||||||||
BL02353___pdx 251 TCGGGCATATCGTTGAAGCGCGTGTTCTTGAAGCGCTTGGCGTTGACTAT 300
BSNT_00024___ 301 ATTGATGAAAGTGAAGTTCTGACGCCGGCTGATGAAGAATTTCATTTAAA 350
||||||||||||||||||.||||.||.||.||||||||||||||||||||
BL02353___pdx 301 ATTGATGAAAGTGAAGTTTTGACTCCTGCAGATGAAGAATTTCATTTAAA 350
BSNT_00024___ 351 TAAAAATGAATACACAGTTCCTTTTGTTTGTGGCTGCCGTGATCTTGGTG 400
||||||.||||..||.|||||.|||||.||.||.|||||.||.||.||.|
BL02353___pdx 351 TAAAAACGAATTTACCGTTCCATTTGTATGCGGATGCCGCGACCTAGGAG 400
BSNT_00024___ 401 AAGCAACACGCCGTATTGCGGAAGGTGCTTCTATGCTTCGCACAAAAGGT 450
||||.||.|||||.||.||.|||||.|||||.||||||||.||||||||.
BL02353___pdx 401 AAGCGACGCGCCGGATCGCTGAAGGAGCTTCAATGCTTCGTACAAAAGGC 450
BSNT_00024___ 451 GAGCCTGGAACAGGTAATATTGTTGAGGCTGTTCGCCATATGCGTAAAGT 500
||.|||||.||.||.||||||||.||.|||||.|||||||||.|.||.||
BL02353___pdx 451 GAACCTGGTACGGGCAATATTGTGGAAGCTGTCCGCCATATGAGAAAGGT 500
BSNT_00024___ 501 TAACGCTCAAGTGCGCAAAGTAGTTGCGATGAGTGAGGATGAGCTAATGA 550
.||.||||||||||||||||||||.|..|||||.||.||.||.||.||||
BL02353___pdx 501 GAATGCTCAAGTGCGCAAAGTAGTCGGCATGAGCGATGACGAACTGATGA 550
BSNT_00024___ 551 CAGAAGCGAAAAACCTAGGTGCTCCTTACGAGCTTCTTCTTCAAATTAAA 600
||||||||||||||||.||.||||||||.|||||.||.....||||||||
BL02353___pdx 551 CAGAAGCGAAAAACCTCGGCGCTCCTTATGAGCTGCTGAAGGAAATTAAA 600
BSNT_00024___ 601 ----AAAGACGGCAAGCTTCCTGTCGTTAACTTTGCCGCTGGCGGCGTAG 646
||.|||| .|||||.||.||.||||||||.||.|||||.||||
BL02353___pdx 601 GCCGAAGGACG----CCTTCCGGTTGTCAACTTTGCTGCCGGCGGTGTAG 646
BSNT_00024___ 647 CAACTCCAGCTGATGCTGCTCTCATGATGCAGCTTGGTGCTGACGGAGTA 696
||||.||.||||||||||||||.||||||||||||||.||||||||.|||
BL02353___pdx 647 CAACACCTGCTGATGCTGCTCTAATGATGCAGCTTGGCGCTGACGGCGTA 696
BSNT_00024___ 697 TTTGTTGGTTCTGGTATTTTTAAATCAGACAACCCTGCTAAATTTGCGAA 746
||.||.||.||.||||||||.|||||.|||||||||||.|||||.|||||
BL02353___pdx 697 TTCGTAGGGTCCGGTATTTTCAAATCCGACAACCCTGCAAAATTCGCGAA 746
BSNT_00024___ 747 AGCAATTGTGGAAGCAACAACTCACTTTACTGATTACAAATTAATCGCTG 796
||||||.||.|||||.||.||.||.||.||.||||||||..|.||.||.|
BL02353___pdx 747 AGCAATCGTAGAAGCGACGACGCATTTCACGGATTACAAGCTGATTGCCG 796
BSNT_00024___ 797 AGTTGTCAAAAGAGCTTGGTACTGCAATGAAAGGGATTGAAATCTCAAAC 846
||.|.||||||||||||||.|||||.|||||||||||||||||||||||.
BL02353___pdx 797 AGCTTTCAAAAGAGCTTGGAACTGCGATGAAAGGGATTGAAATCTCAAAT 846
BSNT_00024___ 847 TTACTTCCAGAACAGCGTATGCAAGAACGCGGCTGGTAA 885
.|.||.||||||||||||||||||||.||||||||||||
BL02353___pdx 847 CTGCTGCCAGAACAGCGTATGCAAGAGCGCGGCTGGTAA 885
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