Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00594 and BL02348
See
Amino acid alignment /
Visit
BSNT_00594 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:13
# Commandline: needle
# -asequence dna-align/BSNT_00594.1.5803.seq
# -bsequence dna-align/BL02348___yciC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00594-BL02348___yciC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00594-BL02348___yciC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00594
# 2: BL02348___yciC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1209
# Identity: 530/1209 (43.8%)
# Similarity: 530/1209 (43.8%)
# Gaps: 534/1209 (44.2%)
# Score: 1946.0
#
#
#=======================================
BSNT_00594 1 ATG---AAAAAGATTCCGGTTACCGTACTGAGCGGATATCTAGGTGCGGG 47
||| |||||||||||.||.||.|||.|.||||||||.||.||.|||||
BL02348___yci 1 ATGAGTAAAAAGATTCCTGTGACAGTATTAAGCGGATACCTGGGGGCGGG 50
BSNT_00594 48 AAAAACAACATTGCTGAA-CAGCATTCTGCAAAATCGCGAAGGCTTGAAA 96
.|||||.||..||||||| || |||..|||||||.|||.||||..|||||
BL02348___yci 51 TAAAACGACGCTGCTGAATCA-CATATTGCAAAACCGCCAAGGGCTGAAA 99
BSNT_00594 97 ATAGCGGTTATCGTAAACGATATGAGCGAGGTGAACATTGACGC-GGGCT 145
.|.||.|||||.||.||.||.||||||||.||.||||||||.|| |||||
BL02348___yci 100 GTCGCCGTTATTGTTAATGACATGAGCGAAGTCAACATTGATGCAGGGCT 149
BSNT_00594 146 TGGTTAAGCAGGAAGGGGGCCTTTCCAGAACAGATGAAAAGCTTGTGGAA 195
| ||.|||| ||||.|||||.||.||.||.|||||||||||.||.|||
BL02348___yci 150 T-GTCAAGC---AAGGCGGCCTGTCGAGGACGGATGAAAAGCTGGTCGAA 195
BSNT_00594 196 ATGTCAAACGGCTGCATTTGCTGCACGCTTCGCGAAGACTTATTAATTGA 245
||||||||||||||||||||||||||.||..|.||.||.||..|..||||
BL02348___yci 196 ATGTCAAACGGCTGCATTTGCTGCACACTCAGAGAGGATTTGCTGGTTGA 245
BSNT_00594 246 AGTTGAGAAGCTGGCAAAAGACGGACGGTTTGATTATATCGTCATCGAAT 295
|||.||.||||||||.||..|.|||....|||||||||||||.|||||||
BL02348___yci 246 AGTCGAAAAGCTGGCGAAGCAGGGAAATATTGATTATATCGTGATCGAAT 295
BSNT_00594 296 CGACAGGAATCAGCGAACCGATCCCGGTGGCCCAGACTTTCTCTTATATC 345
||||.||.||||||||||||||||||||.||.|||||.||||||||.|||
BL02348___yci 296 CGACCGGTATCAGCGAACCGATCCCGGTCGCTCAGACGTTCTCTTACATC 345
BSNT_00594 346 GATGAAGAGATGGGAATCGATCTTACAAAATTCTGTCAGC-TGGATACGA 394
||.|||||..||||.||.|||.|.||....||||| |.|| ||||.||.|
BL02348___yci 346 GACGAAGAATTGGGTATTGATTTGACCCGGTTCTG-CCGCTTGGACACAA 394
BSNT_00594 395 TGGTGACAGTGGTTGATGCCAACCGTTTTTGGCATGATTATCAGTCAGGC 444
|||||||.||.||.||.|||||.|||||||||||.||||.||||||.||.
BL02348___yci 395 TGGTGACGGTTGTCGACGCCAATCGTTTTTGGCACGATTTTCAGTCGGGG 444
BSNT_00594 445 GAAAGCCTTCTGGACCGCAAAGAAGCATTGGGGGAAGAGGATGAAAGAGA 494
||.|||||.||||||||.|||||.||..|.||.||||||||||||.|.||
BL02348___yci 445 GACAGCCTGCTGGACCGGAAAGAGGCTGTCGGCGAAGAGGATGAACGCGA 494
BSNT_00594 495 AATCGCCGACCTCTTGATCGATCAAATTGAGTTTTGCGATGTACTGATCT 544
.||||||||.||..|.|||||||||||.|||||.||||||||.|||||.|
BL02348___yci 495 CATCGCCGATCTGCTCATCGATCAAATCGAGTTCTGCGATGTGCTGATTT 544
BSNT_00594 545 TAAATAAATGTGATTTGGTCAGCGAGCAAGAGCTCGAACAGCTTGAAAAC 594
|.||||||||.||..|.|||..||||.||||.||..||.|||||||.||.
BL02348___yci 545 TGAATAAATGCGACCTTGTCTCCGAGGAAGATCTGCAAAAGCTTGAGAAA 594
BSNT_00594 595 GTTCTTCGTAAAC--TGCAGCCAAGAGCCAAGTTCATTC---GCTGTCAA 639
||.|| |.|||| |||||||.|.|||.||..||| || ||.|||||
BL02348___yci 595 GTGCT--GAAAACTTTGCAGCCTAAAGCAAACATCA-TCAGAGCGGTCAA 641
BSNT_00594 640 AGGAAATGTAAAACCGCAGGAGATTTTGCATACAGGGTTATTTAA----- 684
||||.|.||..|.|||.|||...|.||..|.||.||..|.||.||
BL02348___yci 642 AGGAGAGGTCGATCCGAAGGCCGTCTTAAACACCGGTCTCTTCAATTTTG 691
BSNT_00594 684 -------------------------------------------------- 684
BL02348___yci 692 ACGAAGCGAGCGGTTCAGCAGGCTGGATCAGGGAATTAAACCAAGGACAC 741
BSNT_00594 684 -------------------------------------------------- 684
BL02348___yci 742 CACCAGCATACGCCTGAGACTGAAGAATACGGAATATCTTCGTTTGTATA 791
BSNT_00594 684 -------------------------------------------------- 684
BL02348___yci 792 CGAAGCGCGCCGTCCTTTTCATACAGAGCGGTTTTATAACTGGATTCATT 841
BSNT_00594 684 -------------------------------------------------- 684
BL02348___yci 842 CGCTGCCGGAAAACGTCGTCAGGGCGAAAGGAATAGCCTGGTGTGCGACG 891
BSNT_00594 684 -------------------------------------------------- 684
BL02348___yci 892 CGCAACACCCTTGCCCTTTTGATGTCGCAGGCGGGTCCTTCCGTGTCGCT 941
BSNT_00594 684 -------------------------------------------------- 684
BL02348___yci 942 GGAACCGATCTCTTATTGGGTGGCCGCACTGTCCAAACCGGAACAGGAAC 991
BSNT_00594 684 -------------------------------------------------- 684
BL02348___yci 992 AAATTCTCAGACAGAACCCTGAGCTTTTAAAAGAATGGAATGAAGAATTC 1041
BSNT_00594 684 -------------------------------------------------- 684
BL02348___yci 1042 GGAGACCGCCATACAAAGCTCGTCTTTATCGGATTGGATCTGTCGCCGTC 1091
BSNT_00594 684 -------------------------------------------------- 684
BL02348___yci 1092 TGAAATTACCGCAGAAGCGGATCGATGCCTTTTAACAGATTCGGAGATGG 1141
BSNT_00594 684 -------------------------------------------------- 684
BL02348___yci 1142 CGGCCGACTGGTCGCTTTTATCTGACCCGTTCGATTGGCAGATTGAAAGA 1191
BSNT_00594 684 --------- 684
BL02348___yci 1192 GCTAGATAA 1200
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.