Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02575 and BL02326
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:13
# Commandline: needle
# -asequence dna-align/BSNT_02575___yloA.1.5803.seq
# -bsequence dna-align/BL02326___yloA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02575___yloA-BL02326___yloA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02575___yloA-BL02326___yloA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02575___yloA
# 2: BL02326___yloA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1758
# Identity: 1254/1758 (71.3%)
# Similarity: 1254/1758 (71.3%)
# Gaps: 90/1758 ( 5.1%)
# Score: 4189.0
#
#
#=======================================
BSNT_02575___ 1 ATGTCGTTTGATGGCATGTTTACATACGGAATGACACACGAACTTAACGA 50
|||||.|||||.|||||.||||||||||||||||...|.|||.|.||.||
BL02326___ylo 1 ATGTCTTTTGACGGCATTTTTACATACGGAATGATCGAGGAATTAAATGA 50
BSNT_02575___ 51 GAAAATAATGGGCGGACGAATTACAAAAGTCCATCAGCCATATAAGCACG 100
|...||....||||||||.||..|||||.||||.|||||.|.||||||||
BL02326___ylo 51 GGCGATTCGAGGCGGACGGATCGCAAAAATCCACCAGCCGTTTAAGCACG 100
BSNT_02575___ 101 ATGTGATTTTCCACATCCGTGCCAAGGGAAAAAACCAAAAACTATTATTA 150
|..|..|.||.||.|||.|.||.||.||.||.||||..|||.|..|..|.
BL02326___ylo 101 AGCTAGTGTTTCATATCAGGGCAAACGGGAAGAACCGCAAATTGCTGCTC 150
BSNT_02575___ 151 TCGGCACATCCGAGCTATTCACGGGTGCATATCACGGCAC-AAGCTTATG 199
||.||.||||||||.|||.|.|||||.||..|.|| ..|| ||.|.||.|
BL02326___ylo 151 TCCGCCCATCCGAGTTATGCGCGGGTACACCTGAC-AAACGAAACCTACG 199
BSNT_02575___ 200 AAAATCCAAGCGAACCTCCAATGTTTTGCATGTTGCTGAGAAAGCATATC 249
|.||.||.|||...|||||.|||||.||||||.|.||..|.||.|||.|.
BL02326___ylo 200 ACAACCCGAGCACCCCTCCGATGTTCTGCATGCTCCTCCGCAAACATCTG 249
BSNT_02575___ 250 GAAGGCGGATTCATTGAGAAAATTGAACAAGCGGGCTTAGACCGCATTAT 299
||||||||.||.||.||..||.|.||.|||...|||.|.|||.|.||.||
BL02326___ylo 250 GAAGGCGGCTTTATCGACCAAGTCGAGCAAATCGGCATGGACAGAATGAT 299
BSNT_02575___ 300 GATTTTTCATATCAAAAGCCGAAACGAAATTGGCGA-----TGA-AACCG 343
|.|.||||||||||..|||||.||||||||.||||| ||| ||
BL02326___ylo 300 GGTCTTTCATATCAGGAGCCGGAACGAAATCGGCGACACGCTGACAA--- 346
BSNT_02575___ 344 TACGAAAGCTTTAT-GTAGAAATTATGGGCCGCCACAGCAATATCATTTT 392
|||||| |.|| ||.|||||.||||||.|.||||||||.|||.|.||
BL02326___ylo 347 ---GAAAGC-TGATGGTCGAAATCATGGGCAGGCACAGCAACATCGTGTT 392
BSNT_02575___ 393 GACTGACGCAGCAGAAAATGTGATCATCGACGGACTTAAGCACTTATCAC 442
.||.||||.||.|.||.|.||.|||||||||.|..|.|||||..|.||||
BL02326___ylo 393 AACAGACGGAGAAAAAGACGTCATCATCGACAGTTTGAAGCATCTGTCAC 442
BSNT_02575___ 443 CGTCAATGAACAGCTACCGTACAGTACTGCCCGGCCAAGATTATAAGCTT 492
|..|.||||||||||||||.||.||.||.||.||..|.|||||.|..||.
BL02326___ylo 443 CTGCGATGAACAGCTACCGCACCGTGCTCCCGGGATACGATTACATTCTC 492
BSNT_02575___ 493 CCGCCTGCCCAGGACAAAATATCGCCTCTTGAGGCGTCAGA-AGATGATA 541
||.||.||.|||.|||||.|.||.||.|||||.||| .||| .||.||||
BL02326___ylo 493 CCTCCCGCGCAGAACAAATTGTCTCCGCTTGAAGCG-GAGACTGAAGATA 541
BSNT_02575___ 542 TTTTGCGTCACCTCAGCTTTCAAGAAGGAAAGCTTGATAAACAAATTGTC 591
||.|.||.||.||.|..||.||.|||||.||.|||||.|..||.||.|||
BL02326___ylo 542 TTCTCCGCCATCTGAATTTCCAGGAAGGCAAACTTGACAGGCAGATCGTC 591
BSNT_02575___ 592 GACCACTTTTCAGGGGTGTCTCCGCTTTTCGCCAAAGAAGCGG---TTCA 638
||...|||.||.||.||.||.||.||.||.||.||.|||||.| |||
BL02326___ylo 592 GATACCTTCTCCGGCGTCTCGCCTCTGTTTGCGAAGGAAGCCGTCTTTC- 640
BSNT_02575___ 639 CAGAGCAGGCCTTGCCAACAAAGTCACACTGCCAAAAGCATTGCTGGCAC 688
|.||.||.||.|||||||..|..|||||||||||.|..|||..||...
BL02326___ylo 641 --GCGCGGGTCTAGCCAACAGGGCGACACTGCCAAACGTCTTGACGGAGA 688
BSNT_02575___ 689 TGTTTGCCGAAGTGAAAGAGCACCG----TTTCATTCCCAACATT---AC 731
||||...||||.|.||| || ||| |||||..||||.| || ||
BL02326___ylo 689 TGTTCAGCGAAATCAAA-AG--CCGGCGTTTTCAGCCCCAGC-TTGTCAC 734
BSNT_02575___ 732 GACTGTAAACGGAAAGGAATATTTTTATCTGCTGGAGCTGACTCATCTAA 781
.||.|.|.|||||||.|||||||||||.||.||.||||||||.|||.|||
BL02326___ylo 735 CACAGAAGACGGAAAAGAATATTTTTACCTTCTTGAGCTGACCCATATAA 784
BSNT_02575___ 782 AGGGCGA-AGCGCGCAGTTTTGAGTCAT----TAAGCGAACTGCTCGACC 826
|.||.|| |.|..||..|| |||| |.||||||||.||.||||
BL02326___ylo 785 AAGGAGACAACAGGCCCTT-----TCATACGCTGAGCGAACTTCTTGACC 829
BSNT_02575___ 827 GTTTTTATTTCGGAAAAGCTGAACGAGACCGGGTCAAGCAACAGGCTCAG 876
|.|..||||||||||||||.||.||.|||||.|||||.||.||||||||.
BL02326___ylo 830 GCTACTATTTCGGAAAAGCGGAGCGTGACCGCGTCAAACAGCAGGCTCAC 879
BSNT_02575___ 877 GATCTTGAGCGTTTTGTTGTGAACGAACGGAAGAAGAATGCCAACAAAAT 926
|||.|.||||||||.|..|..||||||..|||.|||||.|..||.|||||
BL02326___ylo 880 GATTTAGAGCGTTTCGCGGCAAACGAAAAGAAAAAGAACGAAAATAAAAT 929
BSNT_02575___ 927 CAAAAAATTAGAGAAAACCCTGGAGTATTCGGAAAACGCGAAGGAATTTC 976
||||||..|..|.|||||.||.|||.|.||.|||.|||||.|.||.|.||
BL02326___ylo 930 CAAAAAGCTGAAAAAAACGCTTGAGCAGTCCGAACACGCGCAAGACTATC 979
BSNT_02575___ 977 AGCTTTACGGAGAGCTTTTAACCGCTAATTTATATATGCTGAAAAAAGGT 1026
||||.|||||||||||.||.||.||.||..|.||...||||||||||||.
BL02326___ylo 980 AGCTGTACGGAGAGCTGTTGACAGCGAACCTGTACCAGCTGAAAAAAGGG 1029
BSNT_02575___ 1027 GATAAACAGGCTGAGGTCATCAATTATTATGATGAAGAAAGCCCGA-CAA 1075
||.|||.||||..||||||||||.||.||||||||| ||.|.|.|| .||
BL02326___ylo 1030 GACAAAGAGGCGAAGGTCATCAACTACTATGATGAA-AACGGCGGAGAAA 1078
BSNT_02575___ 1076 TCACGATTCCTTTAAACCCGAACAAAACGCCTTCTGAAAACGCACAGGCC 1125
||||||||||..|.||.||.||.|||||||||||||||||.|||||...|
BL02326___ylo 1079 TCACGATTCCGCTCAATCCTAATAAAACGCCTTCTGAAAATGCACAAAGC 1128
BSNT_02575___ 1126 TATTTCACGAAGTATCAGAAAGCGAAAAATTCGGTCGCAGTTGTCGAGGA 1175
|||||.||.||.|||||.|||||||||||||||||.|.|||.||..||||
BL02326___ylo 1129 TATTTTACAAAATATCAAAAAGCGAAAAATTCGGTAGAAGTCGTGAAGGA 1178
BSNT_02575___ 1176 GCAAATCAGGCTGGCACAGGAAGAGATCGAATATTTTGATCAGCTGATTC 1225
|||.||||...|||||.|.||.||.||||..|||||.||.||||||||||
BL02326___ylo 1179 GCAGATCAAATTGGCAGAAGAGGAAATCGCTTATTTCGACCAGCTGATTC 1228
BSNT_02575___ 1226 AGCAGCTTTCGTCCGCTTCTCCCCG--GGATATCAGCGAAATCAGGGAAG 1273
||||||||||.||.|| |||.||| .|||||.|.||||||..|.||||
BL02326___ylo 1229 AGCAGCTTTCATCTGC--CTCACCGAAAGATATAACCGAAATTCGCGAAG 1276
BSNT_02575___ 1274 AGCTTGTAGAGGGCAAATATTTACGCCCTAAGCAGCAAAAAGGCC---AG 1320
||||.|..||.||.|||||.||.||..|.|||||||||...|||| ||
BL02326___ylo 1277 AGCTCGCCGAAGGAAAATACTTGCGGGCCAAGCAGCAAGGGGGCCAGAAG 1326
BSNT_02575___ 1321 AAAAAGCAAAAAC---CGCACAATCCGGTGTTAGAAACATATGAATCCAC 1367
|||.||.|||||| || |||..|.|.|||.|||||||.||||.
BL02326___ylo 1327 AAACAGAAAAAACAGGCG------CCGACGCTCGAAGCATATGAGTCCAG 1370
BSNT_02575___ 1368 CTCAGGGCTGACAATTTTAGTGGGTAAGAACAATCGTCAA----AATGAA 1413
||||||....||.|||.|.||.||.||.||||| ||| ||.|||
BL02326___ylo 1371 CTCAGGAGAAACGATTCTCGTCGGCAAAAACAA----CAAGCAGAACGAA 1416
BSNT_02575___ 1414 TATTTAACGA-CAAGAGTGGCGGCCAGAGACGATATCTGGCTTCACACGA 1462
|||||||||| .||| .|.||.|||.|.|||.|.||||||||||||||.|
BL02326___ylo 1417 TATTTAACGATGAAG-CTTGCCGCCCGCGACCACATCTGGCTTCACACAA 1465
BSNT_02575___ 1463 AGGACATTCCAGGCTCCCACGTTGTGA-TCAGAAGC-AGCGAACCGGATG 1510
|.||.|||||.||.||.|||||.||.| || ||.| |.|||.|||||.|
BL02326___ylo 1466 AAGATATTCCGGGGTCGCACGTCGTCATTC--AATCGACCGATCCGGACG 1513
BSNT_02575___ 1511 AGCAAACAATCATGGAAGCCGCGACA-ATTGCAGCTTATTTTTCA--AAA 1557
|||||||.||..|||||||.||| || ||.||.|| ||.||.|| |||
BL02326___ylo 1514 AGCAAACCATTCTGGAAGCGGCG-CAGATCGCTGC--ATATTACAGCAAA 1560
BSNT_02575___ 1558 GCTAAAGATTCAAGTTCAGTGCCTGTAGATTATACAAAAATCAGGCATGT 1607
||.|||.|.||...|||.||.||.||.||.|||||||||||..|.||.||
BL02326___ylo 1561 GCGAAAAACTCCGCTTCGGTTCCCGTCGACTATACAAAAATACGCCACGT 1610
BSNT_02575___ 1608 CAAAAAACCAAACGGCGCGAAACCCGGTTTCGTCACCTATGACAGCCAGC 1657
|||||||||.||.|||||.|||||.||.||.||||||||.||||||||||
BL02326___ylo 1611 CAAAAAACCGAATGGCGCAAAACCGGGGTTTGTCACCTACGACAGCCAGC 1660
BSNT_02575___ 1658 ATACCGTCTTTGTCACGCCTGATGCTGATACT--GTCATCAAGCTCAAAA 1705
|.|||||.|||||.||.||||||| .|.||| .||||||||||.||||
BL02326___ylo 1661 AAACCGTTTTTGTAACACCTGATG--AAGACTTGATCATCAAGCTGAAAA 1708
BSNT_02575___ 1706 AAAGCTGA 1713
|| |.|
BL02326___ylo 1709 AA---TAA 1713
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