Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02617 and BL02325
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:18
# Commandline: needle
# -asequence dna-align/BSNT_02617___ylqD.1.5803.seq
# -bsequence dna-align/BL02325___ylqD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02617___ylqD-BL02325___ylqD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02617___ylqD-BL02325___ylqD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02617___ylqD
# 2: BL02325___ylqD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 393
# Identity: 297/393 (75.6%)
# Similarity: 297/393 (75.6%)
# Gaps: 12/393 ( 3.1%)
# Score: 1086.0
#
#
#=======================================
BSNT_02617___ 1 ATGCAAATTATTCACCGTGTAGCCGTTATGCAAGTCTTAACCGAGCGCAG 50
|||||||||||.||.|||||..||||.|||||.||.||.||.||...|||
BL02325___ylq 1 ATGCAAATTATCCAACGTGTTACCGTCATGCAGGTTTTGACTGAAAACAG 50
BSNT_02617___ 51 CAAAGAAAAGCTTTTAGCTTCTTTTGCCGAAAAGAAA-CAAATGCTTGAA 99
||||.|||||||..|.||||||||||..| ||||||| .||||.|||||.
BL02325___ylq 51 CAAAAAAAAGCTGCTGGCTTCTTTTGAAG-AAAGAAAGGAAATCCTTGAG 99
BSNT_02617___ 100 CGAGAATGCAGCCAGCTCTATTTTCAGCTTAGAAAACATGAGAAAGAACA 149
||.|||||||.||||||||||||||||||.||.|||||.||.||.|||||
BL02325___ylq 100 CGCGAATGCAACCAGCTCTATTTTCAGCTCAGGAAACACGAAAAGGAACA 149
BSNT_02617___ 150 GCAAAATCCTGATATGATTGAACAATTTAAAAAGGCAATAGAAAAGCGAA 199
.||.|||||.|....||.||||..|||||||||.|.|||.|||||.|||.
BL02325___ylq 150 CCACAATCCGGCGGCGACTGAATCATTTAAAAAAGAAATTGAAAAACGAC 199
BSNT_02617___ 200 AAGATGATATAAAAATCATCGATTTTCAAATTGCTCAAGTACATACATTG 249
|.||..|.||.|||||.||||.|||||||||...||||.|.||.|||.||
BL02325___ylq 200 AGGACAAGATTAAAATGATCGTTTTTCAAATCAATCAAATCCACACACTG 249
BSNT_02617___ 250 CCGCTTGGCAGTGAGTTGAAAGAAAAGGAAGTCGATGCGCTGCT-----G 294
|||||||||||.||..|.||.|||||.|||.|||| |||| | |
BL02325___ylq 250 CCGCTTGGCAGCGAAGTAAAGGAAAAAGAAATCGA--CGCT--TTAATGG 295
BSNT_02617___ 295 ACGATTGAAGCCGGGGATGACTGGCATGAGAAAACAGCAGCGAACACCAT 344
|| |||||||.|||||||.|.||||||||.|..||.||.|..||.||.||
BL02325___ylq 296 AC-ATTGAAGTCGGGGATAATTGGCATGATATGACGGCGGGAAAAACAAT 344
BSNT_02617___ 345 CGTCATAAAAGACGGAAAAGTAATTGAAATTCGCCAGAGGTGA 387
|||.||.||||||||.|..||.|||||||||||.|.|||||||
BL02325___ylq 345 CGTGATTAAAGACGGGATCGTCATTGAAATTCGTCCGAGGTGA 387
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