Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02616 and BL02324
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:18
# Commandline: needle
# -asequence dna-align/BSNT_02616___ylqC.1.5803.seq
# -bsequence dna-align/BL02324___ylqC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02616___ylqC-BL02324___ylqC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02616___ylqC-BL02324___ylqC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02616___ylqC
# 2: BL02324___ylqC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 253
# Identity: 183/253 (72.3%)
# Similarity: 183/253 (72.3%)
# Gaps: 14/253 ( 5.5%)
# Score: 627.0
#
#
#=======================================
BSNT_02616___ 1 ATGACTGATCAACACTTGGAAGATTTGATTGT-CCACATTGTGACGCCGC 49
||||.|||||..|||||||||||..||||||| .||| |.||.|..||||
BL02324___ylq 1 ATGAGTGATCTGCACTTGGAAGAGCTGATTGTATCAC-TGGTCAAACCGC 49
BSNT_02616___ 50 TTGTTGATCATCCAGATGACATTCGCGTCATAAGAGAAGAAACCGATCAA 99
||||.|||||.||.|||||..|||..||..|.|.|||.|||| |||.|
BL02324___ylq 50 TTGTGGATCACCCGGATGATGTTCAGGTTTTCAAAGAGGAAA---ATCCA 96
BSNT_02616___ 100 AA---GATTGCGCTGCGCTTATCTGTCCATA---AGTCAGATACCGGTAA 143
.| ||||..|.|.|||.|.||||||.|.| || ||||||||.||
BL02324___ylq 97 GAGCGGATTATGTTCCGCCTGTCTGTCAACAGAGAG---GATACCGGCAA 143
BSNT_02616___ 144 AGTTATCGGAAAGCAAGGCCGGACTGCAAAAGCGATTCGAACAGCTGTAT 193
..|.|||||.||..||||.||.|||||||.||||||.||..|.|..||||
BL02324___ylq 144 GATCATCGGCAAAAAAGGGCGCACTGCAAGAGCGATACGCTCTGTCGTAT 193
BSNT_02616___ 194 TTGCAGCTGGCGCACAGTCTTCTAAGAAAGTTCAATTTGAAATATTTGAC 243
||||.||.|||||||||||||||||||||||||||.||||.||....|||
BL02324___ylq 194 TTGCGGCAGGCGCACAGTCTTCTAAGAAAGTTCAACTTGAGATCGCAGAC 243
BSNT_02616___ 244 TAA 246
|||
BL02324___ylq 244 TAA 246
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