Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02616 and BL02324

See Amino acid alignment / Visit BSNT_02616 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:18
# Commandline: needle
#    -asequence dna-align/BSNT_02616___ylqC.1.5803.seq
#    -bsequence dna-align/BL02324___ylqC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02616___ylqC-BL02324___ylqC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02616___ylqC-BL02324___ylqC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02616___ylqC
# 2: BL02324___ylqC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 253
# Identity:     183/253 (72.3%)
# Similarity:   183/253 (72.3%)
# Gaps:          14/253 ( 5.5%)
# Score: 627.0
# 
#
#=======================================

BSNT_02616___      1 ATGACTGATCAACACTTGGAAGATTTGATTGT-CCACATTGTGACGCCGC     49
                     ||||.|||||..|||||||||||..||||||| .||| |.||.|..||||
BL02324___ylq      1 ATGAGTGATCTGCACTTGGAAGAGCTGATTGTATCAC-TGGTCAAACCGC     49

BSNT_02616___     50 TTGTTGATCATCCAGATGACATTCGCGTCATAAGAGAAGAAACCGATCAA     99
                     ||||.|||||.||.|||||..|||..||..|.|.|||.||||   |||.|
BL02324___ylq     50 TTGTGGATCACCCGGATGATGTTCAGGTTTTCAAAGAGGAAA---ATCCA     96

BSNT_02616___    100 AA---GATTGCGCTGCGCTTATCTGTCCATA---AGTCAGATACCGGTAA    143
                     .|   ||||..|.|.|||.|.||||||.|.|   ||   ||||||||.||
BL02324___ylq     97 GAGCGGATTATGTTCCGCCTGTCTGTCAACAGAGAG---GATACCGGCAA    143

BSNT_02616___    144 AGTTATCGGAAAGCAAGGCCGGACTGCAAAAGCGATTCGAACAGCTGTAT    193
                     ..|.|||||.||..||||.||.|||||||.||||||.||..|.|..||||
BL02324___ylq    144 GATCATCGGCAAAAAAGGGCGCACTGCAAGAGCGATACGCTCTGTCGTAT    193

BSNT_02616___    194 TTGCAGCTGGCGCACAGTCTTCTAAGAAAGTTCAATTTGAAATATTTGAC    243
                     ||||.||.|||||||||||||||||||||||||||.||||.||....|||
BL02324___ylq    194 TTGCGGCAGGCGCACAGTCTTCTAAGAAAGTTCAACTTGAGATCGCAGAC    243

BSNT_02616___    244 TAA    246
                     |||
BL02324___ylq    244 TAA    246


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